Special

ENSG00000124788 @ hg38

Biotype
protein_coding
Gene Symbol
ATXN1
Description
ataxin 1 [Source:HGNC Symbol;Acc:HGNC:10548]
Coordinates
chr6:16299112-16761491:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
68.81
60.5
0
Alternative 3'ss
3
chr6:16402282-16402284
-
31.19
60.5
0
Exon Skipping
49
chr6:16754043-16754091
-
9.29
64.43
0
Exon Skipping
151
chr6:16432946-16433096
-
5.35
51.72
0
Exon Skipping
115
chr6:16753233-16753347
-
74.07
57.23
0
Exon Skipping
2077
chr6:16326394-16328470
-
98.47
14.29
1
Exon Skipping
180
chr6:16740435-16740614
-
4.28
45.6
0
Exon Skipping
138
chr6:16485972-16486109
-
97.19
100
0
Intron Retention
95331
chr6:16657902-16753232
-
7.55
34.17
0
Intron Retention
695
chr6:16753348-16754042
-
9.64
51.24
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000046876 Atxn1 1-to-1
Mouse mm9 ENSMUSG00000046876 Atxn1 1-to-1
Rat rn6 ENSRNOG00000016998 Atxn1 1-to-1
Cow bosTau6 ENSBTAG00000019675 ATXN1 1-to-1
Chicken galGal4 ENSGALG00000012709 ATXN1 1-to-1
Chicken galGal3 ENSGALG00000012709 ATXN1 1-to-1
Zebrafish danRer10 ENSDARG00000060862 atxn1b 1-to-2
Zebrafish danRer10 ENSDARG00000061687 atxn1a 1-to-2
Fruitfly dm6 FBgn0029907 Atx-1 2-to-1