Special

FBgn0030421 @ dm6

Biotype
protein_coding
Gene Symbol
CG3812
Description
The gene 1-Acylglycerol-3-phosphate O-acyltransferase 1 is referred to in FlyBase by the symbol DmelAgpat1 (CG3812, FBgn0030421). It is a protein_coding_gene from Dmel. It has 4 annotated transcripts and 4 polypeptides (1 unique). Gene sequence location is X:12765266..12772851. Its molecular function is described by: 1-acylglycerol-3-phosphate O-acyltransferase activity. It is involved in the biological process described with: phosphatidic acid biosynthetic process. 9 alleles are reported. No phenotypic data is available. The phenotypic classes of alleles include: fertile; viable. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression. Peak expression observed within 00-12 hour embryonic stages.
Coordinates
chrX:12765266-12772851:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
85.45
65.52
0
Alternative 5'ss
91
chrX:12765513-12765603
+
14.55
65.52
0
Intron Retention
1456
chrX:12765513-12766968
+
8.58
57.14
0
Intron Retention
2336
chrX:12767355-12769690
+
2.9
60
0
Intron Retention
90
chrX:12769825-12769914
+
5.57
94.29
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000169692 AGPAT2 2-to-2
Human hg38 ENSG00000204310 AGPAT1 2-to-2
Human hg19 ENSG00000169692 AGPAT2 2-to-2
Human hg19 ENSG00000204310 AGPAT1 2-to-2
Mouse mm10 ENSMUSG00000026922 Agpat2 2-to-2
Mouse mm10 ENSMUSG00000034254 Agpat1 2-to-2
Mouse mm9 ENSMUSG00000026922 Agpat2 2-to-2
Mouse mm9 ENSMUSG00000034254 Agpat1 2-to-2
Rat rn6 ENSRNOG00000000437 Agpat1 1-to-2
Rat rn6 ENSRNOG00000019466 Agpat2 1-to-2
Cow bosTau6 ENSBTAG00000004442 AGPAT1 2-to-2
Cow bosTau6 ENSBTAG00000025161 AGPAT2 2-to-2
Chicken galGal4 ENSGALG00000023517 AGPAT2 2-to-3
Chicken galGal3 ENSGALG00000023517 AGPAT2 2-to-3
Zebrafish danRer10 ENSDARG00000101139 agpat2 2-to-1