Special

FBgn0034137 @ dm6

Biotype
protein_coding
Gene Symbol
CG4945
Description
This gene is referred to in FlyBase by the symbol DmelCG4945 (FBgn0034137). It is a protein_coding_gene from Dmel. It has 5 annotated transcripts and 5 polypeptides (3 unique). Gene sequence location is 2R:16566023..16570120. Its molecular function is described by: ATP binding; protein serine/threonine kinase activity. It is involved in the biological process described with: peptidyl-threonine phosphorylation; peptidyl-serine phosphorylation; mesoderm development. 8 alleles are reported. No phenotypic data is available. The phenotypic classes of alleles include: viable; fertile. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of extremely low expression. Peak expression observed within 12-24 hour embryonic stages, during early larval stages, at stages throughout the pupal period, in stages of adults of both sexes.
Coordinates
chr2R:16566023-16570120:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
16.08
79.41
0
Alternative 3'ss
57
chr2R:16566796-16566852
+
24.62
43.29
0
Alternative 3'ss
84
chr2R:16566769-16566852
+
33.56
47.38
0
Alternative 3'ss
248
chr2R:16566605-16566852
+
19.62
37.08
0
Alternative 3'ss
0
NA
+
41.09
61.03
0
Alternative 3'ss
54
chr2R:16569856-16569909
+
58.91
61.03
0
Alternative 5'ss
0
NA
+
20.72
52.96
0
Alternative 5'ss
15
chr2R:16566263-16566277
+
79.28
52.96
0
Intron Retention
491
chr2R:16566278-16566768
+
72.8
46.49
0
Intron Retention
327
chr2R:16569529-16569855
+
74.4
70.42
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000187550 SBK2 2-to-3
Human hg38 ENSG00000188322 SBK1 2-to-3
Human hg38 ENSG00000231274 SBK3 2-to-3
Human hg19 ENSG00000187550 SBK2 2-to-3
Human hg19 ENSG00000188322 SBK1 2-to-3
Human hg19 ENSG00000231274 AC008735.15 2-to-3
Mouse mm10 ENSMUSG00000030433 Sbk2 2-to-3
Mouse mm10 ENSMUSG00000042978 Sbk1 2-to-3
Mouse mm10 ENSMUSG00000085272 Sbk3 2-to-3
Mouse mm9 ENSMUSG00000030433 Sbk2 2-to-3
Mouse mm9 ENSMUSG00000042978 Sbk1 2-to-3
Mouse mm9 ENSMUSG00000085272 Gm1078 2-to-3
Rat rn6 ENSRNOG00000019082 Sbk1 2-to-4
Rat rn6 ENSRNOG00000038625 Sbk2 2-to-4
Rat rn6 ENSRNOG00000042927 Sbk3 2-to-4
Rat rn6 ENSRNOG00000057696 LOC103690016 2-to-4
Cow bosTau6 ENSBTAG00000006121 SBK2 2-to-2
Cow bosTau6 ENSBTAG00000032140 SBK1 2-to-2
Chicken galGal4 ENSGALG00000013035 SBK2 2-to-3
Chicken galGal4 ENSGALG00000014179 SBK1 2-to-3
Chicken galGal3 ENSGALG00000013035 E1BXS6_CHICK 2-to-3
Chicken galGal3 ENSGALG00000014179 SBK1 2-to-3
Zebrafish danRer10 ENSDARG00000020455 SBK3 (1 of 2) 2-to-6
Zebrafish danRer10 ENSDARG00000031618 CABZ01038517.1 2-to-6
Zebrafish danRer10 ENSDARG00000057687 sbk3 2-to-6
Zebrafish danRer10 ENSDARG00000058944 SBK2 2-to-6
Zebrafish danRer10 ENSDARG00000099069 bsk146 2-to-6