Special

FBgn0035050 @ dm6

Biotype
protein_coding
Gene Symbol
ST6Gal
Description
The gene Sialyltransferase is referred to in FlyBase by the symbol DmelSiaT (CG4871, FBgn0035050). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (2 unique). Gene sequence location is 2R:24691422..24694386. Its molecular function is described by: sialyltransferase activity; beta-galactoside alpha-2,6-sialyltransferase activity. It is involved in the biological process described with: oligosaccharide metabolic process; neuromuscular junction development; protein glycosylation. 12 alleles are reported. The phenotypes of these alleles manifest in: embryonic/larval neuromuscular junction; wing; NMJ bouton. The phenotypic classes of alleles include: phenotype; fertile; paralytic; neurophysiology defective. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of no expression detected. Peak expression observed during early larval stages, during late pupal stages.
Coordinates
chr2R:24691422-24694386:-
Assembly
dm6

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
122
chr2R:24693348-24693469
-
27.82
14.42
0
Alternative 3'ss
309
chr2R:24693348-24693656
-
58.38
15.38
0
Intron Retention
801
chr2R:24693470-24694270
-
87.73
22.47
0
Intron Retention
69
chr2R:24693218-24693286
-
32.48
89.36
0
Intron Retention
62
chr2R:24692261-24692322
-
9.84
77.78
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000073849 ST6GAL1 1-to-6
Human hg38 ENSG00000136840 ST6GALNAC4 1-to-6
Human hg38 ENSG00000144057 ST6GAL2 1-to-6
Human hg38 ENSG00000160408 ST6GALNAC6 1-to-6
Human hg38 ENSG00000184005 ST6GALNAC3 1-to-6
Human hg19 ENSG00000073849 ST6GAL1 1-to-6
Human hg19 ENSG00000136840 ST6GALNAC4 1-to-6
Human hg19 ENSG00000144057 ST6GAL2 1-to-6
Human hg19 ENSG00000160408 ST6GALNAC6 1-to-6
Human hg19 ENSG00000184005 ST6GALNAC3 1-to-6
Mouse mm10 ENSMUSG00000022885 St6gal1 1-to-6
Mouse mm10 ENSMUSG00000024172 St6gal2 1-to-6
Mouse mm10 ENSMUSG00000026811 St6galnac6 1-to-6
Mouse mm10 ENSMUSG00000052544 St6galnac3 1-to-6
Mouse mm10 ENSMUSG00000079442 St6galnac4 1-to-6
Mouse mm9 ENSMUSG00000022885 St6gal1 1-to-6
Mouse mm9 ENSMUSG00000024172 St6gal2 1-to-6
Mouse mm9 ENSMUSG00000026811 St6galnac6 1-to-6
Mouse mm9 ENSMUSG00000052544 St6galnac3 1-to-6
Mouse mm9 ENSMUSG00000079442 St6galnac4 1-to-6
Rat rn6 ENSRNOG00000001823 St6gal1 1-to-6
Rat rn6 ENSRNOG00000046515 St6gal2 1-to-6
Rat rn6 ENSRNOG00000046984 St6galnac6 1-to-6
Rat rn6 ENSRNOG00000048870 St6galnac4 1-to-6
Rat rn6 ENSRNOG00000049676 St6galnac5 1-to-6
Cow bosTau6 ENSBTAG00000000703 ST6GAL2 1-to-5
Cow bosTau6 ENSBTAG00000007309 ST6GALNAC5 1-to-5
Cow bosTau6 ENSBTAG00000010357 ST6GAL1 1-to-5
Cow bosTau6 ENSBTAG00000044129 ST6GALNAC6 1-to-5
Cow bosTau6 ENSBTAG00000046548 SIAT7B 1-to-5
Chicken galGal4 ENSGALG00000005063 ST6GALNAC4 1-to-6
Chicken galGal4 ENSGALG00000005298 ST6GALNAC6 1-to-6
Chicken galGal4 ENSGALG00000005550 ST6GAL1 1-to-6
Chicken galGal4 ENSGALG00000009021 SIAT7E 1-to-6
Chicken galGal4 ENSGALG00000009027 ST6GALNAC3 1-to-6
Chicken galGal3 ENSGALG00000005063 ST6GALNAC4 1-to-6
Chicken galGal3 ENSGALG00000005298 ST6GALNAC6 1-to-6
Chicken galGal3 ENSGALG00000005550 ST6GAL1 1-to-6
Chicken galGal3 ENSGALG00000009021 Q6ZXY4_CHICK 1-to-6
Chicken galGal3 ENSGALG00000009027 ST6GALNAC3 1-to-6
Zebrafish danRer10 ENSDARG00000036913 st6galnac6 1-to-8
Zebrafish danRer10 ENSDARG00000039220 st6galnac5a 1-to-8
Zebrafish danRer10 ENSDARG00000044514 st6gal1 1-to-8
Zebrafish danRer10 ENSDARG00000057433 st6galnac5b 1-to-8
Zebrafish danRer10 ENSDARG00000100804 st6galnac4 1-to-8
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