Special

FBgn0035103 @ dm6

Biotype
protein_coding
Gene Symbol
Vdup1
Description
The gene Vitamin D3 up-regulated protein 1 is referred to in FlyBase by the symbol DmelVdup1 (CG7047, FBgn0035103). It is a protein_coding_gene from Dmel. It has 6 annotated transcripts and 6 polypeptides (1 unique). Gene sequence location is 3L:176306..178963. Its molecular function is unknown. It is involved in the biological process described with: negative regulation of gene expression; protein transport. 3 alleles are reported. No phenotypic data is available. The phenotypic class of alleles includes: viable. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of very low expression. Peak expression observed within 06-24 hour embryonic stages, at stages throughout the pupal period.
Coordinates
chr3L:176306-178963:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
-
84.82
44.74
0
Exon Skipping
284
chr3L:178022-178305
-
76.9
42.91
0
Intron Retention
148
chr3L:177874-178021
-
72.2
61.52
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000197070 ARRDC1 1-to-1
Human hg19 ENSG00000197070 ARRDC1 1-to-1
Mouse mm10 ENSMUSG00000026972 Arrdc1 1-to-1
Mouse mm9 ENSMUSG00000026972 Arrdc1 1-to-1
Rat rn6 ENSRNOG00000007622 Arrdc1 1-to-1
Cow bosTau6 ENSBTAG00000012147 ARRDC1 1-to-1
Chicken galGal4 ENSGALG00000008475 ARRDC1 1-to-1
Chicken galGal3 ENSGALG00000008475 ARRDC1 1-to-1
Zebrafish danRer10 ENSDARG00000068148 arrdc1a 1-to-2
Zebrafish danRer10 ENSDARG00000079839 arrdc1b 1-to-2