Special

ENSG00000197070 @ hg19

Biotype
protein_coding
Gene Symbol
ARRDC1
Description
arrestin domain containing 1 [Source:HGNC Symbol;Acc:28633]
Coordinates
chr9:140500106-140509812:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
18.87
56.94
0
Alternative 3'ss
4
chr9:140507912-140507915
+
79.36
58.18
0
Alternative 5'ss
0
NA
+
81.13
56.92
0
Alternative 5'ss
4
chr9:140507459-140507462
+
18.87
56.92
0
Intron Retention
7060
chr9:140500288-140507347
+
25.16
32.3
0
Intron Retention
453
chr9:140507459-140507911
+
41.18
74.85
0
Intron Retention
104
chr9:140507963-140508066
+
8.36
53.38
0
Intron Retention
262
chr9:140508222-140508483
+
17.28
64.27
0
Intron Retention
84
chr9:140508667-140508750
+
9.26
49.43
0
Intron Retention
83
chr9:140508928-140509010
+
10.2
54.43
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000026972 Arrdc1 1-to-1
Mouse mm9 ENSMUSG00000026972 Arrdc1 1-to-1
Rat rn6 ENSRNOG00000007622 Arrdc1 1-to-1
Cow bosTau6 ENSBTAG00000012147 ARRDC1 1-to-1
Chicken galGal4 ENSGALG00000008475 ARRDC1 1-to-1
Chicken galGal3 ENSGALG00000008475 ARRDC1 1-to-1
Zebrafish danRer10 ENSDARG00000068148 arrdc1a 1-to-2
Zebrafish danRer10 ENSDARG00000079839 arrdc1b 1-to-2
Fruitfly dm6 FBgn0035103 Vdup1 1-to-1