Special

FBgn0035842 @ dm6

Biotype
protein_coding
Gene Symbol
CG7504
Description
This gene is referred to in FlyBase by the symbol DmelCG7504 (FBgn0035842). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (2 unique). Gene sequence location is 3L:8131429..8137498. Its molecular function is described by: transcription termination site sequence-specific DNA binding; RNA binding. It is involved in the biological process described with: termination of RNA polymerase II transcription. 5 alleles are reported. No phenotypic data is available. The phenotypic classes of alleles include: viable; female sterile; female fertile. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression. Peak expression observed within 00-06 hour embryonic stages.
Coordinates
chr3L:8131429-8137498:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
128
chr3L:8137119-8137246
-
14.87
24.08
0
Alternative 3'ss
147
chr3L:8137119-8137265
-
77.49
24.04
0
Intron Retention
57
chr3L:8137266-8137322
-
17.46
81.2
0
Intron Retention
60
chr3L:8133987-8134046
-
4.01
92.16
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000138658 ZGRF1 1-to-1
Human hg19 ENSG00000138658 C4orf21 1-to-1
Mouse mm10 ENSMUSG00000051278 Zgrf1 1-to-1
Mouse mm9 ENSMUSG00000051278 4930422G04Rik 1-to-1
Rat rn6 ENSRNOG00000013267 Helz2 1-to-1
Cow bosTau6 ENSBTAG00000013198 ZGRF1 1-to-1
Chicken galGal4 ENSGALG00000012068 ZGRF1 1-to-1
Chicken galGal3 ENSGALG00000012068 C4orf21 1-to-1