Special

ENSMUSG00000051278 @ mm10

Biotype
protein_coding
Gene Symbol
Zgrf1
Description
zinc finger, GRF-type containing 1 [Source:MGI Symbol;Acc:MGI:1918893]
Coordinates
chr3:127553489-127618023:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
10.26
100
0
Alternative 5'ss
54
chr3:127590055-127590108
+
89.75
100
0
Alternative 5'ss
118
chr3:127560921-127561038
+
5.49
29.31
0
Alternative 5'ss
161
chr3:127560921-127561081
+
94.27
29.31
0
Exon Skipping
154
chr3:127594460-127594613
+
4.35
66.93
0
Exon Skipping
144
chr3:127595879-127596022
+
96.32
100
0
Exon Skipping
115
chr3:127598701-127598815
+
97.05
100
0
Exon Skipping
160
chr3:127602398-127602557
+
97.93
100
0
Exon Skipping
186
chr3:127560896-127561081
+
97.06
17.31
0
Exon Skipping
139
chr3:127584656-127584794
+
73
100
0
Exon Skipping
197
chr3:127587941-127588137
+
95.52
26.79
0
Exon Skipping
186
chr3:127573140-127573325
+
95.54
16.72
0
Exon Skipping
124
chr3:127581446-127581569
+
36.02
78.63
0
Exon Skipping
148
chr3:127608485-127608632
+
94.23
28.12
0
Exon Skipping
177
chr3:127615127-127615303
+
99.59
26.19
0
Exon Skipping
260
chr3:127600980-127601239
+
98.26
100
0
Intron Retention
5770
chr3:127590109-127595878
+
27.67
80.72
0
Intron Retention
2678
chr3:127596023-127598700
+
15.16
42.44
0
Intron Retention
393
chr3:127561082-127561474
+
9.91
36.92
0
Intron Retention
4409
chr3:127563219-127567627
+
13.25
13.55
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000138658 ZGRF1 1-to-1
Human hg19 ENSG00000138658 C4orf21 1-to-1
Rat rn6 ENSRNOG00000036980 Zgrf1 1-to-2
Rat rn6 ENSRNOG00000053387 AABR07013288.4 1-to-2
Cow bosTau6 ENSBTAG00000013198 ZGRF1 1-to-2
Cow bosTau6 ENSBTAG00000026936 1-to-2
Chicken galGal4 ENSGALG00000012068 ZGRF1 1-to-1
Chicken galGal3 ENSGALG00000012068 C4orf21 1-to-1
Fruitfly dm6 FBgn0035842 CG7504 1-to-1