FBgn0052105 @ dm6
Biotype
protein_coding
Gene Symbol
CG32105
Description
The gene LIM homeobox transcription factor 1 alpha is referred to in FlyBase by the symbol DmelLmx1a (CG32105, FBgn0052105). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (2 unique). Gene sequence location is 3L:12329232..12335901. Its molecular function is described by: RNA polymerase II regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity, RNA polymerase II-specific. It is involved in the biological process described with: neuron differentiation; positive regulation of transcription by RNA polymerase II. 14 alleles are reported. The phenotypes of these alleles manifest in: organ system; female reproductive system; anatomical structure; female-specific anatomical entity; female organism. The phenotypic classes of alleles include: fertile; phenotype; viable; visible. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of extremely low expression. Peak expression observed within 06-24 hour embryonic stages.
Coordinates
chr3L:12329232-12335901:+
Assembly
GENOMIC BROWSER[edit]
EXPRESSION VALUES[edit]
SPECIAL DATASETS
- Neural diversity
- Neurogenesis
- Neuronal activity
- Splicing factor regulation (brain)
- Splicing factor regulation (SL2)
Orthologous genes[edit]
Organism | Assembly | Gene ID | Gene Name | Orthology Type
|
---|---|---|---|---|
Human | hg38 | ENSG00000136944 | LMX1B | 2-to-2 |
Human | hg38 | ENSG00000162761 | LMX1A | 2-to-2 |
Human | hg19 | ENSG00000136944 | LMX1B | 2-to-2 |
Human | hg19 | ENSG00000162761 | LMX1A | 2-to-2 |
Mouse | mm10 | ENSMUSG00000026686 | Lmx1a | 2-to-2 |
Mouse | mm10 | ENSMUSG00000038765 | Lmx1b | 2-to-2 |
Mouse | mm9 | ENSMUSG00000026686 | Lmx1a | 2-to-2 |
Mouse | mm9 | ENSMUSG00000038765 | Lmx1b | 2-to-2 |
Rat | rn6 | ENSRNOG00000004642 | Lmx1a | 2-to-3 |
Rat | rn6 | ENSRNOG00000009401 | Lmo2 | 2-to-3 |
Rat | rn6 | ENSRNOG00000017019 | Lmx1b | 2-to-3 |
Cow | bosTau6 | ENSBTAG00000010228 | LMX1B | 2-to-2 |
Cow | bosTau6 | ENSBTAG00000012025 | LMX1A | 2-to-2 |
Chicken | galGal4 | ENSGALG00000003424 | LMX1A | 2-to-3 |
Chicken | galGal3 | ENSGALG00000003424 | E1C2D6_CHICK | 2-to-3 |
Zebrafish | danRer10 | ENSDARG00000020354 | lmx1a | 2-to-4 |
Zebrafish | danRer10 | ENSDARG00000068365 | lmx1bb | 2-to-4 |
Zebrafish | danRer10 | ENSDARG00000077915 | lmx1al | 2-to-4 |
Zebrafish | danRer10 | ENSDARG00000104815 | lmx1ba | 2-to-4 |