Special

FBgn0052105 @ dm6

Biotype
protein_coding
Gene Symbol
CG32105
Description
The gene LIM homeobox transcription factor 1 alpha is referred to in FlyBase by the symbol DmelLmx1a (CG32105, FBgn0052105). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (2 unique). Gene sequence location is 3L:12329232..12335901. Its molecular function is described by: RNA polymerase II regulatory region sequence-specific DNA binding; DNA-binding transcription factor activity, RNA polymerase II-specific. It is involved in the biological process described with: neuron differentiation; positive regulation of transcription by RNA polymerase II. 14 alleles are reported. The phenotypes of these alleles manifest in: organ system; female reproductive system; anatomical structure; female-specific anatomical entity; female organism. The phenotypic classes of alleles include: fertile; phenotype; viable; visible. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of extremely low expression. Peak expression observed within 06-24 hour embryonic stages.
Coordinates
chr3L:12329232-12335901:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)


Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000136944 LMX1B 2-to-2
Human hg38 ENSG00000162761 LMX1A 2-to-2
Human hg19 ENSG00000136944 LMX1B 2-to-2
Human hg19 ENSG00000162761 LMX1A 2-to-2
Mouse mm10 ENSMUSG00000026686 Lmx1a 2-to-2
Mouse mm10 ENSMUSG00000038765 Lmx1b 2-to-2
Mouse mm9 ENSMUSG00000026686 Lmx1a 2-to-2
Mouse mm9 ENSMUSG00000038765 Lmx1b 2-to-2
Rat rn6 ENSRNOG00000004642 Lmx1a 2-to-3
Rat rn6 ENSRNOG00000009401 Lmo2 2-to-3
Rat rn6 ENSRNOG00000017019 Lmx1b 2-to-3
Cow bosTau6 ENSBTAG00000010228 LMX1B 2-to-2
Cow bosTau6 ENSBTAG00000012025 LMX1A 2-to-2
Chicken galGal4 ENSGALG00000003424 LMX1A 2-to-3
Chicken galGal3 ENSGALG00000003424 E1C2D6_CHICK 2-to-3
Zebrafish danRer10 ENSDARG00000020354 lmx1a 2-to-4
Zebrafish danRer10 ENSDARG00000068365 lmx1bb 2-to-4
Zebrafish danRer10 ENSDARG00000077915 lmx1al 2-to-4
Zebrafish danRer10 ENSDARG00000104815 lmx1ba 2-to-4