Special

ENSG00000162761 @ hg38

Biotype
protein_coding
Gene Symbol
LMX1A
Description
LIM homeobox transcription factor 1 alpha [Source:HGNC Symbol;Acc:HGNC:6653]
Coordinates
chr1:165201867-165356715:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
102
chr1:165211236-165211337
-
11.14
58.66
0
Exon Skipping
97
chr1:165212959-165213055
-
8.67
50.41
0
Exon Skipping
78
chr1:165210699-165210776
-
97.24
12.83
0
Exon Skipping
70
chr1:165208063-165208132
-
90.39
61.54
0
Exon Skipping
351
chr1:165207482-165207832
-
12.73
59.63
0
Intron Retention
2864
chr1:165210777-165213640
-
8.28
21.13
0
Intron Retention
2566
chr1:165208133-165210698
-
13.48
23.31
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000026686 Lmx1a 1-to-1
Mouse mm9 ENSMUSG00000026686 Lmx1a 1-to-1
Rat rn6 ENSRNOG00000004642 Lmx1a 1-to-1
Cow bosTau6 ENSBTAG00000012025 LMX1A 1-to-1
Chicken galGal4 ENSGALG00000003424 LMX1A 1-to-1
Chicken galGal3 ENSGALG00000003424 E1C2D6_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000020354 lmx1a 1-to-1
Fruitfly dm6 FBgn0036274 CG4328 2-to-2
Fruitfly dm6 FBgn0052105 CG32105 2-to-2