Special

FBgn0261461 @ dm6

Biotype
protein_coding
Gene Symbol
RhoGAP18B
Description
The gene Rho GTPase activating protein at 18B is referred to in FlyBase by the symbol DmelRhoGAP18B (CG42274, FBgn0261461). It is a protein_coding_gene from Dmel. It has 6 annotated transcripts and 6 polypeptides (3 unique). Gene sequence location is X:19136107..19167082. Its molecular function is described by: GTPase activator activity; Rho GTPase binding. It is involved in the biological process described with: actin cytoskeleton organization; signal transduction; positive regulation of GTPase activity; regulation of GTPase activity. 71 alleles are reported. The phenotypes of these alleles manifest in: trichogen cell; mesothoracic tergum. The phenotypic classes of alleles include: phenotype; increased mortality during development; flight defective; visible. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 06-18 hour embryonic stages.
Coordinates
chrX:19136107-19167082:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
26.38
39.37
0
Alternative 3'ss
15
chrX:19164686-19164700
-
35
77.33
0
Alternative 3'ss
175
chrX:19164686-19164860
-
38.62
78.31
0
Alternative 5'ss
0
NA
-
88.27
26.47
0
Alternative 5'ss
68
chrX:19166789-19166856
-
11.73
26.47
0
Exon Skipping
1149
chrX:19150811-19151959
-
77.86
77.86
0
Intron Retention
18008
chrX:19146143-19164150
-
9.94
100
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Rat rn6 ENSRNOG00000012563 Arhgap29 1-to-3
Rat rn6 ENSRNOG00000013220 Arhgap45 1-to-3
Rat rn6 ENSRNOG00000027257 Gmip 1-to-3