BtaEX0041301 @ bosTau6

Exon Skipping

Gene

ENSBTAG00000037981 | ZNF416

Description

zinc finger protein 416 [Source:HGNC Symbol;Acc:HGNC:20645]

Coordinates

chr18:64976079-64981097:-

Coord C1 exon

chr18:64981059-64981097

Coord A exon

chr18:64980519-64980645

Coord C2 exon

chr18:64976079-64977649

Length

127 bp

Sequences

Splice sites

3' ss Seq

ATCTGTCCCCCTCATGGCAGGCC

3' ss Score

8.73

5' ss Seq

TGGGTAAGG

5' ss Score

9.08

Exon sequences

Seq C1 exon

ACTCCCATGAGGACAGAAGTGCTTCGGGACTCTTCAAAG

Seq A exon

GCCTGTGTGACCTTTGAGGACGTGGCCATTTACTTCTCCCAGGAGGAGTGGGGGCTCCTTGATGAAGTTCAGAGACACCTGTACTGCAAGGTGATGCTAGAGAACTTTGCACTGACAGCCTCGATGG

Seq C2 exon

TTTGTTTGCATGAAACACAGACTAAAGAGACACCTTCTGAGCAAAACGTTTCTCTAGAAGCTTTGTCACAGGTCAGGACTCCAAAGGTAGGTCCATTCACCGAGAATGCTCACCCCTGTGAGAAATGTGTCCCAATCCTGAAAGACATTTTGTACCCTGCTGATTTACCAGGGCAGAAACCATACTTTACTGGGGCATCTGCAAACCTACAACAGCTTCAGAAGCATTTCACTACAGAGAAAAGTGACGTGGATAAGGCAGCATTTGTAAAAAGCTGCATAGTCCAGGTGTCAGGGAATCCCTTCACCTGTAGGAAGGTTGGAATGGACTTACCAGGTACAGTGGGTCTCCTCCAGCACCAGATCACTTCCAATGGTGAGAAACCCAACAAAATCACCAAGTTTGGGGAGACTTTTAATGGTAGAAAAAGTCATTACAAATTGCGTGAATGTGGGAAAGCTACCAGCCACAAACACAATCTTGTTTACCACCTAAGAGTC

VastDB Features

Vast-tools module Information

Secondary ID

ENSBTAG00000037981-'1-2,'1-1,4-2

Average complexity

C1

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.538 A=0.000 C2=0.052

Domain overlap (PFAM):

C1:

NO

A:

PF0135222=KRAB=WD(100=95.3)

C2:

PF0135222=KRAB=PD(0.1=0.0),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=4.8)

Main Inclusion Isoform:

ENSBTAP00000049250