BtaEX0041347 @ bosTau6

Exon Skipping

Gene

ENSBTAG00000019844 | ZNF467

Description

zinc finger protein 467 [Source:HGNC Symbol;Acc:HGNC:23154]

Coordinates

chr4:113425036-113430244:-

Coord C1 exon

chr4:113430128-113430244

Coord A exon

chr4:113429308-113429421

Coord C2 exon

chr4:113425036-113426546

Length

114 bp

Sequences

Splice sites

3' ss Seq

GGTAGCCTGTTCTCTGCCAGGGC

3' ss Score

5.44

5' ss Seq

CAGGTGAGT

5' ss Score

10.67

Exon sequences

Seq C1 exon

GACTCTCTGTGGGACAGCCGGAGATGACCCCCCAAAGTGAGCCTGGGGAACAGTCCCACGATGCCCAGGAGCGGATGTCTCCTCCCCAGGAACAGAGAGTGCTGGGTACAAGCTCAG

Seq A exon

GGCGCGAGGCCCCCAGGCCGGAGAAAGGTGCCCGCACGGAACAAGCTGAAACTCCCTGCAGAGAAGACCAGGTGTGTGCACCACGCAAGCCTGAGCCCACGGGCTCCTGCCCAG

Seq C2 exon

GGGACGAGTGGATGATTCGGAAGGTGAAGGTAGAGGAGGAGGAGGAGGATCGGGAGGCCCACAAGGAGGCGGAATGGCCCCAGCATCTGGCATTACGCCCCAGCCCCTTTCCCCCGCCTGACCTGGGGTCTCTGGCCGCCGCGTATAAGCTGGAGTCGGGGGCCCCAGGGACACTGGGTGGGCTCGCGCTGGCCGGGTGGGTCCCGACCGCCTCGGAGAAGCCCTACGGCTGCGGGGAGTGCGAGCGCCGGTTCCGGGACCAGCTGACCCTGCGGCTACACCAGCGGCTGCACCGCGGCGAGGGCCCGTGCGCCTGCCCCGACTGCGGCCGCAGCTTCACGCAGCGCGCGCACCTGCTGCTGCACCAACGCAGCCACCGCGGCGAGCGGCCCTTCCCCTGCTCCGAGTGCGACAAGCGCTTCAGCAAGAAGGCGCACCTGACCCGCCACCTGCGCACGCACACGGGCGAGCGGCCCTACCCGTGCGCCGAGTGCGGCAAG

VastDB Features

Vast-tools module Information

Secondary ID

ENSBTAG00000019844_CASSETTE1

Average complexity

S*

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=1.000 A=1.000 C2=0.412

Domain overlap (PFAM):

C1:

NO

A:

NO

C2:

PF134651=zf-H2C2_2=WD(100=5.2),PF134651=zf-H2C2_2=WD(100=5.2),PF134651=zf-H2C2_2=WD(100=5.2),PF134651=zf-H2C2_2=WD(100=5.2),PF134651=zf-H2C2_2=WD(100=5.2),PF0009621=zf-C2H2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=5.2),PF0009621=zf-C2H2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=5.2)

Main Inclusion Isoform:

ENSBTAP00000026440