BtaEX0041530 @ bosTau6

Exon Skipping

Gene

ENSBTAG00000040358 | ZNF772

Description

zinc finger protein 772 [Source:HGNC Symbol;Acc:HGNC:33106]

Coordinates

chr18:64856654-64859207:-

Coord C1 exon

chr18:64859081-64859207

Coord A exon

chr18:64858451-64858573

Coord C2 exon

chr18:64856654-64857801

Length

123 bp

Sequences

Splice sites

3' ss Seq

CTGTCCTGTCTTTTCCTTAGGAT

3' ss Score

12.38

5' ss Seq

CTGGTGAGT

5' ss Score

10.1

Exon sequences

Seq C1 exon

GGGAATGTGACCTTTGAGGACGTGTTCGTGTCCTTCTCCCAGGAGGAGTGGGGGCTGCTTGATGAGGCTCAGAGGCTCCTGTACCGCGAAGTGATGCTGGAGAACTTTGCACTGATGGCCTCACTGG

Seq A exon

GATATGCATCTTCCATGTCCCATGGGGTTTCCCCACAGGAGCTGGGCAGGGAGCCCTGGGTCTCTGACTGGGCCAACACAATTCCAGCCCTGACCAGAGAGGCTCAGAGTGCAGGTAGCCCTG

Seq C2 exon

GTTGTTGGCATGGAATGGAGGACGATGAGATCCGTTTTGAGCAGAGCATTTCTATAAAAAGAGTGTCTAAGGGCATGATTCCTAAGACGATTCCGTCTTCCCAGAAGGCTCACCCCTGTGAGACATGTGGCCCGATCTTGAGAGATGTTCTGCACATGGCTGAGCACCAGGAAACACGTCCTGGGCAGAAACCATACTTGTGTGTAGCATGTGGGAAACAGCTGTGGTTCAGTGCAAACTTCCCCCTCCACAATCAGCACAGTGGAGAGAAACCCCACAGGAGGGACGTGCACAGGGCCCTTCTTGTGAGCAGCTGCCCTGTCCAGTCGTCAGAGACACCTTTTACCACCGGGGAGGGTTGTGAGGACTTCCCAACCAGCTCAAGCATGTTTCAGCAGCATTACCCTCTTAGCAAGTGGAAGCCACAGAGTGACACCCACTGTGCAGAGGTCTTTCACAGTGGACAGAAGCATTATGAGTGCAGCGAATGTGGGAAGGCC

VastDB Features

Vast-tools module Information

Secondary ID

ENSBTAG00000040358_CASSETTE1

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.190 C2=0.084

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=6.8),PF134651=zf-H2C2_2=WD(100=6.8),PF0009621=zf-C2H2=WD(100=6.0),PF134651=zf-H2C2_2=WD(100=6.8),PF134651=zf-H2C2_2=WD(100=6.8),PF127602=Zn_Tnp_IS1595=WD(100=13.8),PF134651=zf-H2C2_2=WD(100=6.8),PF134651=zf-H2C2_2=WD(100=6.8)

Main Inclusion Isoform:

ENSBTAP00000055306