HsaEX0074329 @ hg19

Exon Skipping

Gene

ENSG00000197128 | ZNF772

Description

zinc finger protein 772 [Source:HGNC Symbol;Acc:33106]

Coordinates

chr19:57980954-57987154:-

Coord C1 exon

chr19:57987028-57987154

Coord A exon

chr19:57986392-57986514

Coord C2 exon

chr19:57980954-57985789

Length

123 bp

Sequences

Splice sites

3' ss Seq

CTGTTCTATCTTTCCCTTAGGAC

3' ss Score

12.12

5' ss Seq

CTGGTGAGT

5' ss Score

10.1

Exon sequences

Seq C1 exon

GGGCAGGTGAACTTTGAGGACGTGTTCGTGTACTTCTCCCAGGAGGAGTGGGTGCTCCTTGATGAGGCTCAGAGGCTCCTGTACCGTGATGTGATGCTGGAGAACTTTGCACTTATGGCCTCTCTGG

Seq A exon

GACATACATCTTTCATGTCCCACATAGTTGCCTCACTGGTGATGGGTAGTGAGCCCTGGGTACCTGACTGGGTGGACATGACCCTAGCTGTTGCCACAGAGACTCCAGGTGGGAGTGACCCTG

Seq C2 exon

GTTGTTGGCATGGAATGGAGGATGAAGAGATACCTTTTGAGCAGAGCTTTTCTATAGGAATGTCACAGATCAGGATTCCCAAGGGAGGTCCTTCTACTCAGAAGGCTTACCCCTGTGGGACATGTGGCCTGGTCTTAAAAGACATTTTGCACTTGGCTGAGCACCAGGAAACACACCCAGGGCAGAAACCATACATGTGTGTGCTGTGTGGGAAACAGTTCTGCTTCAGTGCAAACCTTCACCAGCACCAGAAGCAGCACAGTGGAGAGAAACCCTTTAGAAGTGATAAGAGCAGGCCCTTTCTTCTGAACAACTGTGCTGTGCAATCAATGGAGATGTCTTTTGTGACAGGGGAGGCTTGTAAGGACTTCCTAGCCAGCTCAAGCATTTTCGAGCACCATGCCCCTCACAATGAGTGGAAGCCACACAGCAACACCAAGTGTGAGGAGGCCTCTCACTGTGGAAAAAGGCATTACAAATGCAGTGAATGTGGGAAAACC

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000197128-'2-8,'2-3,5-8

Average complexity

C2

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.055 C2=0.064

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF0214814=zf-UBP=WD(100=24.8),PF134651=zf-H2C2_2=WD(100=6.3),PF099474=DUF2180=WD(100=14.1),PF134651=zf-H2C2_2=WD(100=6.8),PF0009621=zf-C2H2=WD(100=6.0),PF134651=zf-H2C2_2=WD(100=6.8),PF134651=zf-H2C2_2=WD(100=6.8),PF0013017=C1_1=WD(100=13.8),PF134651=zf-H2C2_2=WD(100=6.8),PF127602=Zn_Tnp_IS1595=WD(100=13.8),PF134651=zf-H2C2_2=WD(100=6.8)

Main Inclusion Isoform:

ENSP00000341165