BtaEX6084021 @ bosTau6

Exon Skipping

Gene

ENSBTAG00000030470

Description

Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:F1MV65]

Coordinates

chr18:58703860-58711966:+

Coord C1 exon

chr18:58703860-58703948

Coord A exon

chr18:58706623-58706749

Coord C2 exon

chr18:58710990-58711966

Length

127 bp

Sequences

Splice sites

3' ss Seq

GATATGTGTTTTCATTTCAGCAG

3' ss Score

7.02

5' ss Seq

TGGGTGAGG

5' ss Score

6.74

Exon sequences

Seq C1 exon

GATAGACCTCTGAAGACTCATGTTGCCTGAGGAAGCCCAGAAGAGGAGGAAGGTGAAAGGAGGAAGAGTCTGGAATGGCTCTTTCTCAG

Seq A exon

CAGCAGATGACCGTCGAGGACGTGGCCATCAAATTCACTCCTGAGGAGTGGGAATGCCTGTCCCCTGCGCAGAGGACTTTGTACTGGGACGTGATGCTGGAGACCTACAGGAACCTGCTCTCTGTGG

Seq C2 exon

ATATCTCTCCCATACATATTATCAAGAAATTACAATCAAAGGAGAACACTAACTCAACAGATACACTCCAAACAGTGATTTTGGGAAGACATGAAAGCCATGGAGTCCAAGATTTTTACTTAAGGGAAATACGAGGCAATACGCTTGAGTTTGAGTGTCAGTGGAAAGATGACGAAAGAAATTACAAAGGAGTGCTTGTAATCCATAATGAAAAGCTCACTGATAGAAAAGATCAACGTGGTAGAAGCAATGCAGGAAACAATGCAATTGAAAATAAACTTGCGTTAAGCTTTCAGGATGAATTGCAGATATTTCGAATGGAAAGGAAAATTTTTGAATGTAATCAAGTTGAGAATGTTATCAACAATAGTTCCTCAATTTCAGCTCTCCAAAGAATTCCTCCGAGTGTTCAAACCAACACTTCTAACATGTATGGGAATAATTTTATCCATTCTTCAATACTGACAAAAGACCATAAAGCGCATAGGGAAAAACCTTAC

VastDB Features

Vast-tools module Information

Secondary ID

ENSBTAG00000030470-'6-9,'6-5,8-9=AN

Average complexity

A_C3

Mappability confidence:

100%=75=75%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.000 C2=0.153

Domain overlap (PFAM):

C1:

NO

A:

PF0135222=KRAB=WD(100=95.3)

C2:

PF0135222=KRAB=PD(0.1=0.0),PF134651=zf-H2C2_2=WD(100=8.6),PF134651=zf-H2C2_2=WD(100=8.0),PF134651=zf-H2C2_2=WD(100=8.0),PF134651=zf-H2C2_2=WD(100=7.7),PF134651=zf-H2C2_2=WD(100=8.0),PF134651=zf-H2C2_2=WD(100=7.7),PF134651=zf-H2C2_2=PU(19.2=1.5)

Main Inclusion Isoform:

ENSBTAP00000016857