BtaINT0044504 @ bosTau6
Intron Retention
Gene
ENSBTAG00000005784 | CSMD2
Description
CUB and Sushi multiple domains 2 [Source:HGNC Symbol;Acc:HGNC:19290]
Coordinates
chr3:112591484-112607937:+
Coord C1 exon
chr3:112591484-112591605
Coord A exon
chr3:112591606-112607833
Coord C2 exon
chr3:112607834-112607937
Length
16228 bp
Sequences
Splice sites
5' ss Seq
AAGGTAAGG
5' ss Score
10.51
3' ss Seq
AATCCCTGCTCCTTCCGCAGGTG
3' ss Score
11.24
Exon sequences
Seq C1 exon
CCCGCATGTGTGATGCCCACCTTCGAGGCCCCTCGGGCATCATCACCTCCCCCAATTTCCCCATTCAGTATGACAACAACGCACACTGTGTGTGGATCATCACAGCACTCAACCCCGCCAAG
Seq A exon
GTAAGGCTCGCAGGGAGCGTGGGTCGTGTCCTGTGGGCAGGACTGGATTGGAGACAGTTGTTCTACCGGGGAATTCAGACCCAGAACTTGGTTCTCATAGATTTTCTGAAGACAATTATTAAAAATTGTTTTTATTAAGTATCAAGTTGATACAAAAGCATACTTGTAAAATATGATATAAAGAACATCAATATAAGACACTACTGTGTAGCCATCTCCCAGCTCGAGGGAAAACAAAAAGCCCCACACATATCTTAGTGATCTGTGTCCCTCGTAACTTCATCCCATTCCCCAATCCTCAGGCCACCATTACCTCCACTGTGTACTTTATTATTCCTTTGCTTTTCTTTATAGTTAGCACATAAGTATGTATCCCTCCAAATGCAATGTTTAGCTTCCCAGTACTTGAACTTCATGGAAATGTAATCATGTTGTATTGATATGTAGTCTTAATCAGCTTTACTCAAAATTAGGTCCTTAAGGTTTTGCTGTATTGCCACGTTTCATTTTGTACTGGTCTGTACATTTTTTTGCATCTTTCTCATTTAGTGTTTTTTCCTGTGAAGTACCCTTTGCTTGCTAATAAATTTGATAAGTATCTTGCCAAGATCCACAAAATAACCTGTTAGAATTTTTAATTATACAAAAAATACAGATAAATTGAAGAAGAACTGGTACCTTTATGATTCCAAGTCTTCCAGTCTCTTAATATGGTATATCTTTCCTTAGAGCTTCTTTAATCACTTTCGATAAACTTGTGTAATTTTTTCATTAAAAACCTTGTACATTTCATAATACATTTATTTCTAGATATTGTAGTTGTTGCTTTTATAAATTGTATCTTTTAAAATGTAGTTTTCTACCTGTTTCTTGCATAGTGGTTAGAAATGCAATTAATTTTTATACGTTACAGCTATCCCATGGTAATTTATCTATGAATTTTTAGCATATTCTACAGAAGACAATCATAATCTGCAAAGAATGATGGTTTTGCTTCGTCCTTTTCAATCTTACACCTTTTCATCAACCTTTTTCCTGCCCCAGTGTTCTACCTAGAATCTCCGGTATAATGTCAAATCACTGTGAGGATGGTAGGCACTTTTGTCTTTGTTCAATGTCAAACAGACTGTTTTACTTCTTCACCATGAAGTATGATGTTTGCTGAAGTCTTTGTTTTAATTTACAGTTCCTTTCTAATCCTAGTTTACTAAAAGCTTATATTGTGAATGGATGTTGACTTTTATTGAGCATCTCTCTACATCTATTGATATAATCATATGATTTTTTTTCCTTTATTCGCCTGTGTGGTGAATTCCACTTTAATTTTTCTGTTGTTAAGCCAACTCTGTATTCCTGGGATAAACCCAATCTGGTCATTTAGTATTAGCATTTTTTAAATATACCTATATTTGAATTGCTAGCATTTTACATAGTCATTTTGCTTCTGTTTTGTTATGTATTACAGATTTAACAAAATAAAATATATTCTATATACATCACACACACACACACACTCTTGCCAGATTTCTATATCAAAATATTGGTAAAATGAAAGTGAAGTCGCTCAGTCGTGTCCAACTCTTTGCAATCCCATGGACTGTAGTCTACCAGGCTACTCTGTCCATGGGATTTTCCAGGCAAGAGTACTGGGGTGGGTTGCCATTCCCTTCTCCAGGGGATCTTCCTGACTCAGGGATCAAACCCAGGTCTCCTGCATTGCAGGCAGACCCTTTACCCTCTGAGCCACCAGGGAAGCCCAAGATATTGCTAGCCTCATAAAATGACTTAGACTTTTTCATCTCTTTCTATCCTACTGCCTGTTTTTAGTGTTTTACAGTTGTGGATATTTTGGTATTTATCCTACTTGATTTCATTAAACTTGAATCTATGGATGACATCTTTCATCAGTTTGGAAAATTTTTTAGCTATTGCTATTTCAACTGTTGTCTCTCCTTTATTCTCTTTTCTGCTTCTGGAAGTCTGACAAAGCATGTTAATGAGTCTCATTCTATCTTCTTTTCTTAACCTCTATCATTTTCTCCCATTCTGTTCAAGAATTCTCAGTTATGTCTAACCTCTGTTAATCATTCTCTGAAGATTCATTTTAATTTCAAATATTAGTATTTTGCATTTATGAAAGCTTATTTAGTTTTTTTGATTGCTTTTGAGTTTATTTTATAGTCTCTGGCTCCTTACATATATTTAAGTCATTTAAATATATTGAGGACATTTATTTTATATTCTGTGTCTCTTAATCTCAGTATATGAAACCTTTGCAAGGTTCACTCTGTTGCCTGCTGTTTCTCACCCCTTGCCCTCAGAATCATGTTTCTTTCTTTGTTGTATAATTTTTGACTGTGTGGTTAGAATCATAAACTGTGGGGGAATTCTTTGAGATTTGGGTAGAAGCTGGTGTATTTGTTACTGCTCTGTGCTTGGGGCCATTAGCAGTCAGCAACCTCTTCAGATTAAATTCTCAGTATGAAGGTTTCAAACCACCCAAGTAATCTGAAGACTGCAAACCCATATGAAAACAGATTTATCATGAGAGAGTCTCAGAGGAAGTTTTCTATTTGCTTTCATTCAGTGTCAAAATCTGAAATAAACGATCAGCCTTCAGATCTACCCAGAGGTTAGCAGAGCTGTATGAGAAGGAAGTAGGCTTATTTCTAGCTCAACCTCACACTAAGGGTGCAACTTTAACCAGTTCAGCCTTGTTCAGGGATGTCATCTGAAAGTTCCCAACCTTGGGGGGCCCTGACCTTTGTCTCCTGCTCCCTCTTCTCCACAAGGCCCTGAAAATCAAAGCTCTACTTCACCAGTTTTAAAAAATGTGCTTCATGCTCCAAATCACTTTTTGCATCTCTACATTCACTGGGGGTTAGACTCTGAGAGCTCTTGCCATCCTAGTCTTCTTGGGCTTCCATAACAAAATATAACAGATGGGGTGGCTCTAACAAGAGACATTTAGTTTCTCACAGTTCTAGAGGCTAGAGGTCCATGATCAAGATGCCAGCAAACTTGGTTTCTGGTGAGATCTACTCCCAGCTCACAGATGACCCCACAGACGGCCTCCTTCTCAGTGTGTCTTCCTGTGTTCTCTGTGCACATGCAGAGAGGAACGTTCTGGCGTCTCCTCCCCTGTTTTGAGGACACCAATCCCACTGGTAGGGCCCCATCCTTTGACTTCTTTTAACCTTAGTCACCTTCCTAAAGGTCCCATCTCTAAATATCATCATATTGAGGGTTTGGGCTTCAACATATGAGTTTTAGGGCAATATAATTCAGTTTATAACACTTATTAACTTGTAAAAAGCTTTCTTTTTCTTTTTAAATTTTACTCAACATTTTAAAACTGTTTGCGCCAAAGTGCTTAGTACCACAATACTTGGAACACTGGACCCAGATTTCCTCTACAAGTCATTTTGCAAATAAAGAATCATATTTTATCAAACCATTTGATGGTGAACCTAGTCAGTGGAGAAGGATGCTTCAGCCACATAGGGGTAGAAATGGAGGCTAACCCAGAAGAAGGACCTTGAAGTTGTTAAGTTGTTAACTAGAGGGCTATATCATGGGCATTGTTAAAGAACTACAGATGCTTATCTATGTTTGCTTTTGAATCTGAAGATGGAGTAGAGGGTGAAGCGTAGGAAAGTCCTGAAAATTTTTTGAGAAACGGTCTGATTAGCCCTCAGAAGACCTAACCTTGGCTGGTGTGTGGAGGTCAATGGCCCCATGTTAGTCACCACCCCACATGCCATGCAATAGGTCACTCCAGCCTGGGTTTCTGAAGCCAGTCCCTCTGAAAGGCACTGCCTCAGAGTTAGGTTATACAGAAGGATGTTCTTCGTGGGATCTTCATGGGTTCTTAGTGGGCTTCAGGTAGTGCTAGGGAAGCCCAGAAAGACTGAAGGGGGTTCCTCACTGACACAACCCAGGAGGAGAGCCAAGAGCATACAATGCAGAAAGGAGATTATAAGTCTAGAAACTCAAAGTCTGAGACTGAAGGGTAGGAGCTGCCTTCCTGCAAACAGCAGAGAAAATGTTTGCAGTGTATTCCTACCACTGTTCAGCAGCCAACAGGAGAGATTCAGTGCATTCAAGGACTGCCTGTCTGGTCACCTTGGGGACATCTCCTTTAGCAAAAATCACAGCCTTTTCACGTTCACAGTATGTTTCATGAGCTTAGCATTTATTCATTCATTGATTGTTGGTATGATCTCTGCCCTTGAGAAACATGCACGCAGGAGAGGAGGATGGGTAGAAACGTGAAGCTAGAGTTCAGACAAGTGCTAATGGAGCTGTGTCCAGAGTGTGATGGGAAAATCTAGAAAAGAGACACTAATGGAAGGCCAGGGAACTTGGCACAAAGGCAGTGACATTTGAACAGGGTCTTGAAGGATGAGGATATCAGAGCAGACACCTGTGCCGAGGCACTGAGGCTTGGGACAGTCTCTTAGAACTGAAAATAACTCAACATGCCTATATCAAGATGAGGCTGGAAAGTCCACAAGATCCAGATCAAGGTGAACCCGCAGGCTTGATATAGAGGCTTAGATTTTATTCTGAAACAGATTTCTAAGAGTAGAAGTGTTAGGCTATTTGTGATAATAGTAATAGCTATCTCTTATTCTATGCCTGTTATATGCCAAGAACTGAACTAGGCCTTCTGTGTAAATGACTTTATTTCATTCTCTTCATAGCACAAATAATTAAGTTTTAAAATACCCATTTGGTGGATGAAAAACCTGAATCATGGACAAGTTAAAGGTTAGGAAACTTGGTCACAGCACATAATCAGTATTTAGTGGCAGCACTGGGCTTTAAAGCCAGTCTTTCTGGGTCCATGGTCCATGAACTTAAGTAGATGTGCTGTGCCATTGGATGGAACATGGTCTCAGAATTGATGGGAGGGGTTGGGACTTGGAGCGCTGGGATAAGCCTTGGGAAGAATGAGGGCCACTCTTTCTTCTGTACCAGAGCAATAGCAGAAAGAATTTTTTAAAGATTACTGTGGCAGCAGTGGAGATATTAGAGAGGGATATTGAAGGGAGTGAGACCAGTTAGGAAGCTGAAGCAGATACCCAAGTAAGAAAAACGGGGTCATCAACCAAGGCTTAGGAAACATGGAGAGGGAGACAGATTTAAGAGAAATCTAGGGAATGAGGGCTTCCCTTGTGGCTCAACTGGTAAAGAATCCACCTGCAATGAGGGAGACCTGGGTTCGATCCCTGGGTTGGAAAGACTCCCCTGGAGAAGGGAAAGGCTACCCACTCCAGTATTCTGGCCTGGAGAATTCCATGGACTATACAGTGCATGGGGTCTCAAAGAGTCAGACATGACTGAGTGACTTTCACACTCATTAGAGAACGAGATGGGACTTGGTGGCTGATGGATATGTGATGGAGGGAAAAGGAGAGGTCTCATTCACCATTGTGTCCCAAGTGACCACCATAGTGTCTGGCATACAGTAGACACTCAGGAAACATTTGTTCAATGACCAAATAGATGAAAACTCCATGTTTTCTCACTTGGACTAATGGGAGGCTTTCAAAGGAAATACAAGAGGAGGAACAAGCTTGGCAGCAGTCGAGAGGGAAACATGGTGCTCTGAAGTGCCTGTGTTTCATCCAATGACATTTGGATACACTGGTTGAAAAGTGAATAAATCTGGGTTCAGGAGAGAGATGTGGGTATCATTGCATCGACACACAATTGGGAACAAGCGTAAGGGATGAACAACACTTCTTGGAAAGAGCAAAGAGATTGAAAAGATTCAGAATGGGTCTGGGAACACAATCCTTACAGATGACTGAGATCCAGTGAAAGAAGCAGAGAAAGAGCCATTGATAGGAGAATCGAGTTGCAAAAGCAAGAGGTTTCCAATCAGGATATGTCTGACAGTGGTGATGCTGAAAAACATCTTGTTGGAAAAGGACTGGAAAGAGACTGTTGGCTTTGGCCTTGGAAGAAGATCTTTCGGCTTTGCTTTGTGGGGCAGCATATTAAAAGGCAGAGACATTACTTTGCCAACAAAGGTCCATCTAGTCAAAGCTATGGTTTTTCCAGTGGTCATGTATGGATGTGAGAGTTGTCCATAAAGGAAGCTGAGCATCGAAGAATTGATGCTTTTGAACTGTGCTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTCCAAGGAGATCCAACCGGTCAATCCTAAAGGAAATTAGTACTGAATGTTCATTGGAAGGACTGATGCTGAAACTCCAATACTTTGGCCACCTGATGTAAAGAACTGACTCATTGGAAAAGACCATGATGCTGGGAAAGATTGAAGGCAGGAGGAGAAGGGGATGACAGAGGATGAGATGGTTTGATGGCATCACCAATTCAATGGACATGGGTTTGAGTAAGCTCTGGGAGTTGGTGATGGACAGGGAGGCCTGGCATGCAGTCCATGAGGTTGCAAAGAGTTGGACATGACTGAGCGACTGAACTGAACTGAGCAGAAGTGGGTGGGGAGTGCATGGATGGGGAGGGGGTTCTATAGAGGCCAGGCATGTGGACAGCCCTTTGGACAACTTTGTGGTAAAGGGAGGGCAGGAGCAAGGGCACGTGAGGGAGGCTGGGTGAACAGAAGGCTCTGGGCTACTTAGGATGTTTGTTGTTTAGGAGATTGGGATTTTGAGTGCGGTTGTAGACTGAGGGCAAAGCAAGCACAGAGGAAGAGAGTGACGATGTAGGATTAGAGGTTGGGGAGTGAAGGACCTGGAGTCAGTGAGAGGCAAACTGGACTGAGAATGCAGCAGCTCCTTTCACAAGAAGCAGGTGAGGAAAAATACCATCGTGAAAAGGGGCTGAGAGTTTCGCCTGTAGAATATGTGTCTGTAGAAAAGGACATGTGTCTCTTCTAAAAAAATTTTTTTTATTGTGGCAAAAGTCACACGATATAAAACATACTATTTTAATCATATTTGTTTTATTATTATTTAATCATATTGTACAGTTCAATGGCAGAAAGTACATTCACATGATTGTGCATCTGTTACCATCATCCATCTCCCAAATTTTTCACTTTGCTAAACTGAAACTCTAGCCCCATTAAACTCTACATTCCAACTCCCACTCCTCGCCCTCCACGCCTGGCCCCTGACATCTACCCGTGTACTTTCTGATTCTATGAATTTGGCTATTGTAGGCACCCCGCATAAATGGAATCAAGCAGTATTTGTCTGCACCTACTGTATATTAGGATGCATTTTCAAGGTTGACTTAGTACCACACATGTCCCTTTGGTCTCCTTATAATCCGGGAATGGTTACACATCCCTGGCGCCTGAGTGTAAGTGTGGCCATTTCATCTCCTTTGAGCTTGAGAGGGAGCTGGGAATGTTCCAGTGACTGGGGCCTCCAAGGGTGAACAGAAGCCCCAAACAAAGGCCAGCAATGACCTGGCATGGGAATGGCCAAGAACCTATGTCACGATGCCAGCCTCGACTGAGCGCGATGGGCTAAGCAGCTCTACCCTGTGGGAACAAGAATTGACAGTCTGATTGCAGAGGCCGGTGAAGGGTGTGTCTCTCCTCGGTGAACTAAGAATAAAACAACGAACACCACCCCGTCGTCCTCCCAGAAGTTGTGCAGATTCAGGGAAGAGGAACCGCAGCTCAGAACAAGTGAGGTTGGCCCGCTCTGCTGGGTGCACAGCTCCACCTTCTCGCTTGGATGGGGATGGCCTGGAGAAACAGGAGACCTGCCTCGGCCGGTTGGGCTATCTTAGTATTTGTAGTCATTCTGCCCACAATAATATTTCCCAAATTTGATCAATCGTCAGAAATACCTGGAGAGAGTTTAAAGACATAAATTTCAAAATCCTTTCCTCAAAGGTCTGATTAGTGGAGGTGAGATAAGAACCTGGAATTTGCACTTTTAAAGAGCATCCCTGTGGTTCTGACCAGCTCAGCTTATATGATAGAAAACAACCCCTTCCTGTCCCAGCAAAGCACACAGGGCCCTCCTGCCCGCCTCTCCCCAGGCAGTCCTGGCTTCAGCCACACTGCGCTCCTGGTTCAGACACAGCTGGCCCTTAATTTAAGACCTCTGTCCAGCACATCCTCCCCCAGTGTATCTCTTCCATGCAAATTCCTATCCGCCTTTGAGACACAGTTCAGACTTCCGCTCTGCAGAGAAGCCTTCCAAACCCCAGCAGGTCTTAGCGCTGCCTCTGTTCCTCCAGCACTTCGTCAGCCTCTTCTGTTTTGTGCATATGATGTTGCACTGGGTTTAGAATCTCTTTCCCCCATAGCTCAGCAGAGCCCCCCAAAGCAGGGGCGGCGTTTGTTTCTCTCTCCTGCAGTTAGCACAGCCCCCAGTACAGAGGAGGAGATCCGCAGGTGTTTGGATACATTACCAAGTGCTGGAGGAGACCTGTCCCTGGGTCAGGTAGCTCCTCAGGCACGGCCCCGCCCACTCTGGGCCCCAGAGCCTCCTCCTGTTAGGACCTTCCAGCTTAGCCTCCAAAAGGATGTGGCTGATGAAATTTTCATGGTTGGAACTGAAACCCAGGCCTGAGTCGGTGCCCCCTACCTGCATACACCTGCCTTCCTTTCACAGCTTCTCGGTATGAAATCAGGCCATGTGAGGCAATTTGCCTACGATCCTCACCGCATTTGATCAGGAAATTAATCCACCTGTGCTAGAAAAGAAGTAAAAGGCAGGCAGGAGAGAACGAGCAAGGTGGGAGGGAGAGGGAGAGCGCGTTTCATGAACTTCAAAGCCGAAGAGAACAGTGTTTCGATTACTCACTCCTTGGGGATTAGCCCTGTCACTCTTCCCTGTGTAGACCCGGAGAACTGAGAAAGAACTCTCCAGGCAGCCGTCACTCTCTCGTGCAAATGTCAGGAACCTCTGTGCTGGCCCATTTGTTCACTCACTTATTCATTCAGCAAACATTTACTCCTGTGTGTTCTATGCTGGGCCCCGTGCAAGATGCCGGCTGGTGATCAGAGAGGTTTTCCCTAATCGCCCCTGCAACTCATTCCTCGTGAGTGGGCGGCTCTAGAGGGACCCTTTCAGGGCCTCCTGCAGGTCCTCACCCAGATCCCTTTCCTTTCCACAGTTGTCCTCACTTCCCAGCATATCTTGGCATCCCCCTTCCCCTAGAGCTAGCTATGGGTCCCCACATGCCTTCCTCTGTGAAGACAAAGCGTGCTCCCTCCTCTGGATGGGACTTTGTGCCCTTCGCACCTGCTGCATCCCCAGCTGCCCTGACGTCAGCACTCACCACCCTGCGCTGTGTTCCCCATGGACCCATGTGTCTCCTCCTCTAGGCAGTGAGGTCTTGGGGTGGTATTCACATTTGTCTTGGCTCTGTTGCTTCTTCAAAGCCCAGTACTTGGCAAGGGCATATTAACAGTTGAATAAATCCATCAACCAACGAGTGAATGAATGCATGAAAGGGCTTACTACTCTCAGAGCCACCAAAATTCAACTTGAGGTACTGGCCAAAGTTCCACAACCTCTGAACCTTCTCAGTCTTTGCCCTTGGGCTTTCTTACCCAAACTCCTCGAAAGCATTTCGCAAAGATGCTGAAGATCTCTCTGCTTGAATTCTTGAGGGTTCAAGCCAGCCCTTCCACCGGCCTCCCCTTCTCCCCCGCCAAGAACCAGTTCTCCAGCCCCGCCCTGGGCCCTCAGCAAGACCCCTGCAGGAGTCACCATGCAGTCCATGCCAGGGGAAAGGGAATTCCCCTCCTTTCTTGGAGCTAAGAGTCAGGCTGCCCCAGGGCATTAGGAACCCAAGGCGGAGGGTTGAGGAAGCCAAGGTCACCCCTCAGGAGCCAGTGCTCTGAGGAGGAATAGGGAAGCAGTCCTGGAGCAGAGGATTGCAGAGGGGCTCTGACTAGGTGGGAAGGGCCAAAAGCAGGTCATGAAAAGTCTAGGGTTTCCATGCCAAGAAACTGAACTTTATCCTGAGGGTCAAGAGCTGATGAATTTTTCTATGGTAATGAAAGCCTTTCTTCAGAACCCACAGTCATTAGGTTGTGATTGGCTGTGAGTAGCAGAAAGCTCCACAGAAGCTTATACAAAACACAGATTATTTCTCCCACATCCCAGGGGTCCAGAAGTGAAGACTCCAGGGCTGGATTAGCAGTTTTCTCAGTGTCTTGAGCACCTCCTATTTTTCCCTCTGCCTTTCTTGGCTCTTATCCTCATGATCACAAGAAGGCTGCTCCACCTCTGTCCTCACATCTGTATTCCAAGAACGCAAGGAGAAAGGTGAGATAACGCCCTGAGGACTCCTTAGCTCATGTCCCACTGCCCAGAATCCTGTCACTTCCCTATCCTTAGCTCTGTGCTTAGCCAGGTCCATTGCCACATTTCAACAGCCAGCATTCTATTAAGAATGGTAAGCAGTGGGAGGGACAGTGAGTGAACCATTATCTGTGTCTGCCACAGAATCCCAACCATGAACTAGATCCAAAGGAACTGCTTTGGTTGGAGCAAGATCCAGGCCATTCTGGTCTTTTCCCACCTTTGTTTGTGCCCCTTTAGTATCTTTATGGAACCCTGGGGTTCCTGAGAACCATGTTGGAAAACCACTGCTCTAGGTCAGAGGTCAGCAAACTTTCTGCAAAGAGTTAGATTATAAATATTTTAGACTTTGAGGACTATGTGAGGCTTTTGTTGCACATCCTTCTTTGTAGTGCTTTACTTATTTTCTAACCCTTTAAACATGTAAGAATACGTCTTAGCTCAAGGTGCCAAACAAAAACAAGCCTCAGGCCTGATTTGGCCCAAGAGCCATGGTTACCCAACCCTCACTCTAAAAGGGTCGTGCAGCACAGAGTTTGGGGTTCAGAGTGAAGGATGGGCAGCAGACTGGAGCCTAGCTAGGAGACAGTTATAGAAATGCAGTCACTGGACAAAACAATCTCAGTCTAGATCTCTTGGCGCTTCCCAAAACATGCCTAAGAGCGGTCACATCCTCTGCAGCCACACTGAAACCTTGGACACAGGCTGACAAGACTGGGATTCCTGTCTTTAGCTGGTCCTGGATGATGCTCAGGAAGCAAGGAATGTCCTTCAGGCCCAGGGTGGGCACCCTCCATGGTCCTACTCCCATCCGCCACAGTTCTTGGGAAAGGCAGCAAGGTCCTGAGGGGTGCAGTCTCCAGGACTCAACTCCCTCCACCACCCTGCAGTGAACACAGGCTCCCCGAAGCCCTCCTGCTGCTGCTGGACCATGGACCGGCCTCCTGGCAGGTCTCTGTGCCCCCAGCCCCTCCCTCCATGCTGAGTGACAGCCTCTCCCCATCTTCACCCTCAAGTCCAGGCTACCTGTTCTGGCCTGCCAGGCAAAAGCCAACTGCAGACCCAGCCAGGCTGCTGTCTCCTCCCCTCACCACCCCCAGCTGCCCTCACCGGTCCTTGTTCCCCAAGCATCTCTGGGATGGAGCCCACACCCTTCTCTGCCTGCAGGGCCCAGCACGCCCACCTCCTCTGTGTGGCCACCTTTCATCTCTCCCTCCTCTGCTGTCCTCCAGCACTCTCCATCTGTACCATGCCTTTGGCATTTAGATTCTGCTCCACGTTGTCAGACAAGTGAGATAACTTACAGGCTGCAGCTAGCTCAGTGCTCGGCACATGGCGGGTGCTCAGTAATTACATCCTAGCGAAGGGTTCTTTTATTCATTTATCTAATGGGTGCAAATTGGGTGTCTGACTGTGCACACACGTGCCTCTTTAATCACGCCTGTTTCATGTGCTGTCACTCTCCTGCCTTAGAAAGACACTTTGCCAGCTTCACTCATCTGCATGTTAGTTAATGAATCATTACAGGATCGTGTCTTTAAACAAAGGCCAGAGAGAAGAGGGGAACAAATGAAAGCCCCAGCACACTGAGTACCAGGGGCCCGTCCCAAGGCTTCAACACTGAGTGTTTTGTGCTGACTGCTTGGTGTAATCAGCTCCCACATTGGGGTCAGATGCTCTAAAATGCAGCTCACATCAATGGTACTCTACTCGGTGATGTGAAACATTTTATGGCTCTGGGTTCTGGCCTGCAAAGCGAACTTTTCCCATCATGGACATAGTAATCACATACTCCCTTTTTTGGCACTGGCTTGGTGACCTGGGGCTTCCCGGAAGGGGTGAGGGTGGCAAGAATGTACAGGCAGGACCCTGACTTCTCCCTGCGGAGGCCGGGCCCCTGGGTCTGCAGAAGGCACAGCTGGCCTTAGAGTATTTTATGAGCAAGTGTTGGCTGAGCAGCTGGGATCCAGAGAAAGAGCTTAGGGAAGGTTGAGAGGGTAAGTCACGGCCCCCATCGTATGGACCTGAGACCTCCCTGGGATGCTGTGAGACAGTAGAGCAGGGTGGTAGGGGCCTGGCCTCTGCCTGATGAGTCCCAGGTCTACTGCTTAGCTGTGTGATCTTAGGGGAGCTGCCTAACGTCTTTAGGCTTGGCCTTTCCCATTTGTAAAATGGAGGGCTTCACAGTGGCCGTGGCTGTCATGAGTCTTTAGTGAGTTAATGTTTGTAAAATACTCAGAACAGCCAAACACATTATAGGTGTCGCTCTTGTGGTGATGAAGTCTCTCAAGAGAAGATAGTCAAAAACTGATTAAGTATCTCAAAGAATCTCCTAGACCAGGGGTCGGCAAACTACCACCTTTGAGCCAAATCTAGTGTATTGCTTATGTTCGTAAACTAAATTTTATTGGGACACAGCCACACTCATTGGCATGCATATCAATGTACGTGGATCATGGCTGTGCATGCTGCCTGAACATATGCAGCCATGGCTGTGTTCATGCTACAGCAGCAAAGAGGGGTCTTTGCAACAGATATCATATAAAATGCTCAGGTGAAAATACTTATTACCTGGCCCTTGACAGGAACAGTCTGCCGACCTTTGTTCTAGATGGTATCTCCTGTGAGAGATCCAAGAGCCTGGAGATCCGTCCATGCTTGAGGCTCAGGAAAGGTTTGGAAAGTATTCTCCCATTCAGCAGGGTCTGAGCGCGTCATGTGCCTGGCACGCTGACAGGTTCTGGCAGGTCAAAGGCCATGAGACCAGGCCCCTGCCCTCCAGGAAGTTCATGAAGTAGTGGGAGACCAGGTAAAGAGCTCAGTCACAGCACAACAGGTAAGTCCTGACACGGAGAAGAGAGGACGGGCAATCAGGGAGCCCTTGGATGAGAGCTCAAGGATGTGGAAATGTTGCTAGGGGAGCCGGGGACGAGGGAGGGGACTGTGCAAACCAGGATCATGAATGGGCTGGTATGAGAGAATGCTACATAGGCAGTATGATGGGATGGCAGCAGGAAGCAGGAGCCAAGGGTCCTTCCTTATGTACCAGGCTAGGAAATGGCATCATTCTGTGGGGCAGGACTAGGGACAGTAAGAGATAGGAAGCCAGTTCCAGCCTGACTAGATGATCCAATGATGACTGGTCATCAGGGAACATGGGAAATGAGCTTGCCTACCTGGTGAGAAAGCTAGAGGGATGAAGGCTTCCTCCCTGGGCTTCCCAGGTGGCTCAGTGGTAAAGAATCCACCTGCCAATGCAGGAGACGTGGGTTTGCGCCCTGGGTAGGGAAGATCTCATAGAGAAGGAAATGGCAACTGACTCCAGTATTCTTGCCTGGAGAATCCCATGGATAGTGGAGCCTGGTGGGCTACCGTCCATGGGATCACGGAAGAGTCAGACATAACTTAGTAACTAAACAACGATAACAAAGGCTTCCCCACTCACTGTAGATGCTCACCGGAATACATGTCTATATAGCCAACAAGGGTTTTTATCAGGAGGGTCTAGCATTTTTGTTGAAACTATCTGAGAGTCCCAAGCAGGAATCCCCTCCTCATGATACTTATCACCAATGATTGGGGTGCTCACTACCTCTGAACACAGTCCTTTTCATTGTGGGACAGTTCTGACAGTCACAGAGTTGGTTTTCAGTGCCTCTCGTCTCCACCTTCTGCCCTTGGACGGGGCCAGGCAGGGCTGCTGCTGCTGCCCCTGCCTCTGCCCTCGAGTCTCTGCTCTAGGTCAGTACCTCTAGTCCCTCCATCCCCTGTTTTCTAACAGCCCCCAACCACTGCTTCAGGCCCACACTTCTGTGCAGCCCAGACATTTTCCACCAGCCCTCAATGCCGTTTCTCCTAAAACAAAAAGCTCACCCCACACCTTCACTTACCTCTCTTCCTGGAGGACAGAGCCCAAGTCTGTGATACGACAGCCAGCGCTTCCTCATCCGGCTCCTCCTGCTTGTCTTGTGTCCCCACCCTCTGCTTCCCTCTCAGCCACCCAACTCCAGATCCACCCGGAGTTTCTGGACATGCCATGCACCCCACACCTCTGCGCCTGCTCCTCTCTCTGCTTGGACCACTTTCCCTTCCTTCTCCATTTATTGGACTCCTCCAGTCCACCTCCCAAACTCAGCCTGGGCTTCATGTCCTCCAGGAAGCCTCCTGTGGCCTCCTCCCAGACAGTGCCACCCCTCCTCCCTGTCCTGTCTGCAGCTCCTCACCGTGGGTCCCAGGCCCGGAGCCGAGGGCCCTGCACAGGCAGTACCGGGCTCACACACAAGCACAGCAGAGGTTTCCTTCCTGGGACCCTGAGAGCACCCTGGGGTGAGACTCTGCCGTGCTGTTTGGTTTGGACAGCAGAAGCCTGCACAGCCATAGGAAAATCTATCCATGGGAATTCTTTACTCCTAGAGTAGCAGAAGAGAAAACAAAGAAGCACTTTCAGCCTCCCTACGGGGAGACTGAAGATCTTCATCAGATTGAAACCAGACTGAAACAGACAGAAAGAGGACCAGCTGAGATGCTTAGGCGAGGCGACTCTGAGCGTCCTGTCTTCGTGAATGGCACCACCACCCACCACCCCAATTGCCCCAGCCGGGAATATGCAGGTCATCCCAAACCACCCCTCCTTCAGTCCCCACATCCATCAATCACAAAACCCTAAACACTCCAGGACCTGACTCTCTCTTCCGTCTGCATCACCCTCCTGCATCACTCACCTCACTGCCCCTGAAGCCTGGAACCATCCTCACCGCCTGGGCGTCACTGCTGCCGGGTCGTGACACTTGTGTCAGTTTCCACACAAGCCGCCAGCCCAATGTTCTCCTCCAGCACCTAGTGTCCCGTCACCCGCTGTGGACAGCTGTCCTGCTGCTGCTCCCTCAGGATGAATGCAGCTGTCTGGGGTCGGGGAGGCTATGAGCACCTGGCCGCAGGCAGCCTTCTCAAGTTCTAGACGTTCCTGAGTCGCCTCCTTGCACTGAAGGCCCAATCACATTGTCCCCCGGAGTGAGGCAGCCGGCCACTGTGTTCAGTTTCCAGACCTGCGCTGATAGACCCTGAGCACTTGTTCTGGAATGTTCCATCTCAGCCACAGCTCAGGCCTTCTGCACCTGACCCCTGCCTCTCCCAGCATCCCCTTTTGACCTGACAGTCTTCCAGAGCTGTCAAAACTCTCAGGACCTACCCCACCCTCATCACAAACAGCCTCCCCTCCTCCCCTCCCAGCAGGCTGGGTGAGCTGCAGGCTTCAAGTAGCATCTGTCACCTGGGGTTGTGATTATCAGTTTGTTTTTCTCTCTCCCCCCTCACCGAAGGCAGGGATCATGTCATGCTGACCACTGAAACCCTGTCTCCTAGGCTGGCACGTGGTGGGTCTTTAGTATATATATGTGGCAGGCAGGACTAAACCAAGTAAGAGAGAAGAATCTTGTCGAAATGTCTTTCCTGGAACATTCATTTATTCAACAAATAGACCAAGTGCATGGAGAAAAGAGGGCACAGGAGAGGCTGAGAGAAACTTCTGCAGGTCCCCGGGGACCACATAGCTGAGATTCCACATGTGGCCTGAAAATTTGCCACCAATTCTACAGGGATTTCTGTGCATTAAAGTGTGAAGGCAGAGTCTAATCATCTCACAGTTGGCCAGATGTGCCTGGGGTTGCCATGACAGCCCCCAGAATTGGCCAGATGTGCTGTAATCCACTTTGGAAAACATCAGGGAACCCCAGAGACTGTGTGGTCCAGAAGAAAAAAAAGTTCCCACTCTAAAAGGTGGCCTGGAAGTGCTCGGTGTGGACGGAGGGTTTCGTGGGGTGGTGTCACGGTGCTCTGAGCATCGGGACATGGAGCTTCTTGCTGTCTTCAAGGCCAAGGAAGGCTCTCCCGGCGGCCCCTGCCTGCTGCCTAATCCCTGCTCCTTCCGCAG
Seq C2 exon
GTGATCAAGCTGGCCTTCGAGGAGTTTGACCTGGAGAGGGGTTACGACACCCTGACGGTCGGGGACGGCGGGCAGGACGGGGACCAGAAAACGGTGCTGTACAT
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000005784:ENSBTAT00000007609:14
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.086
Domain overlap (PFAM):
C1:
PF0043115=CUB=PU(33.9=90.2)
A:
NA
C2:
PF0043115=CUB=FE(31.2=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]