BtaINT0044581 @ bosTau6
Intron Retention
Gene
ENSBTAG00000038281 | CSMD3
Description
CUB and Sushi multiple domains 3 [Source:HGNC Symbol;Acc:HGNC:19291]
Coordinates
chr14:54074830-54086226:+
Coord C1 exon
chr14:54074830-54075021
Coord A exon
chr14:54075022-54086081
Coord C2 exon
chr14:54086082-54086226
Length
11060 bp
Sequences
Splice sites
5' ss Seq
TAGGTATGA
5' ss Score
6.99
3' ss Seq
TTTTGTTTGTTTGTTTTAAATTA
3' ss Score
-0.74
Exon sequences
Seq C1 exon
GTTCTGTTGCCACTGCGTGTCGTGACCCAGGGGTTCCCATGAACGGAACTCGAAATGGAGATGGACGAGAACCTGGAGACACTGTGGTTTTTCAGTGTGACCCAGGATATGAACTTCAAGGAGAGGAAAGAATAACCTGCATTCAGGTAGAAAATCGATACTTCTGGCAGCCCAGCCCACCAGTTTGTATAG
Seq A exon
GTATGAATTTAGAACAATTAAAATTTTATGCAACTGTGAAATGATGGTTAAAAACTAGTTTCAGTGTTATTAAGAACGTTATTCTAGAATAGGTTCTAGATCTCAGAGGTCTATGACCTTCCAAAAAATGCACAAAATTGTAAATCATTATTTTTCCCCTGAGGAGAGAGTGGGTCTATAATTTCATTATATGCTTAGTGGTTTTAACACTCTTTTAAAAAAGTTAAGAATCAAAGTTCTTGAAAAACCTTCATCTTGCCTTATCTGCTACGTTGTTGTTCACTGTTGTTCAGTCACTAAGTTGTGTCCAACTCTGTGTGACCCCATGGACTACAGTACACCAGGCTTCCCTGTTTTTCACTATCTCCTGGAGTTTGCTCAAACTCATGTCCATTGAGTCATTGATGCCATTCAACCATCTCATCCTATGTCACCCTCTTCTCCTCCTGCCCTCAATCTTTCCAGAATCAGGGTCTTTTCCAATGAGTAGACTCTTTGCATCAAGTGGCCAGAGTATGAGGCTGCCAAAGTATATATTATCTGCCAAACAAATGTAGTTATCCAACACTTTTAAAATTTAAAGAACAGATTCAGACACTGTATTTGAAATGGGTCATATTTATCTTGCCTCTCTAATGGCTATTTCTTCTAAGAAAGAAAGTTGTATCAGAATTTAAATTTGAGTTTTAGGGCTTTGATTTTTCCTTCAATCCATGTATTCCAGATCAGTTTTTATTTTGATGATCTAAGGATTTGCAACCACTTGGTTCATACTTCCAACTCTCTGTCTTTTGCTTCCATGCCCTGTTCTTGAATCTTCAGGTTAAACTCTTGAAAATCAAGACACACATTATTTCTTTACCAAGTGTGAGAAAAACTTTATACCACCTTTAGAATGAAAATAGTGAGAAAATATGCTGTGTAATCTTAACAAAAAAAGATCTCATCATTAAGGTTCTTACATTCAACTAATTCAGTCTCAAACCTGTGGTTCAAGAGCTTTTAAATTGGTGTCATCTAGAATATGTAATACATTTTGACTGAAATTTGTATTGTCTACTCAAAACTTTATTTATATGCATATCCTTTCCTTTGGTACACTGTAAGCAAGTAGAGAGAAGATTCCATTTCTTGTTCATTGTATTTCTTCTAGAATGCAAATTTAGCACATTCAGGAGAGAAAGACTTATTTTTGTTCTCTTATATCTAACTCATAAATACATTTTCACTAATTATTTCACAGAGTCACATGATAATAGGGAATGAGTGTTTAGTACTTAAGCACTCAATTATTCAGATTTATTTTATTCATTTTATATTTCTTATGCATGAGATGGAAACTCAAATTCATAAGTGTGTCCTACACATTGTTATAGACATGGAGGATTTAGCATTAAAATAATATAGAAGAGTTCTCTGTTTTTGTGAACCTACTCCTAGTAAAGTGAAAACTAAACAGTCTGGATTTTCATATCACATATTTTGCATTTTATAGTTTGGAATTAACAAAAAGCACTCAATATGGAAAATGAAACATATCTAAAGACTCAAACCAGCCAGGGTTTGACTTCTAGGTATTTCTAGACTTCTGTAGAAAATGGGACAGATGATAAGGACAAAGCTTATTAAAGAGGCTGAAAAAAATGCACAGAATAAGTACATACCTTGAGCCACTTCAGATTTAGCCATATTTCCCTTTACAATTTATTATTTCCATTTATACCTATGTTGCTCACTATGCATGTATCACTGAAAGATTCTAAATAATCAGATATCTATTACTTTGCATTTTATTATAACTTCACTCATAAATGCAGACAAAAAATACAAGGAAAAAATGCTTTCAAAGGAAAGACTGAAACAGTGAAATGTTCATTTATTTGTGTACTGCACAGATTATCTAGAAAATGCCAATTAAACAAAAATACCACATTCCAATTAATTGGAATCTGGCTGAGCATCTTGTAAAGGGCATCTGTGTAAAGAGAAAATGACAGAACTTCAGAAACTTACTTGGAATTTCTTGATTTATTGTGATTTTTTTTCAATTTATTTAATTTTTAAACTTTACATAATTGTATTAGTTTTGCCAAATATCAAAATGAATCCGCCACAGGTATACATGTGTTCCCCATCCTGAACCCTCCTCCCTCCTCCCTCCCCATACCATTCCTCTGGGTCGTCCCAGTGCACTAGCCCCAAGCATCCAGTATCGTGCATCGAACCTGGACTGGCATCTCGTTTCATACATGGTATTTTACATGTTTCAATGCCATTCTCCCAAATCTTCCCACCCTCTCCCTCTCCCATAGAGTCCATAAGACTGTTCTACACATCAGTGTCTCTTTTGCTGTCTCGTACACAGGGTTATTGTTACCATCTTTCTAAATTCCATATATATGCGTTAGTATACTGTATTGGTGTTTTTCCTTCTGGCTTGCTTCACTCTGTATAATAGGCTCCAGTTTCATCCACCTCATTAGAACTGATTCAAATGTTTTCTTTTTAATGGCTGAGTAATACTCCATTGTGTATATGTACCACAGCTTTCTTATCCATTCATCTGCTGATGGACATCTAGGTTGCTTCCATGTCCTGGCTATTATAAACAGTGCTGCGATGAACATTGGGGTACACGTGTCTCTTTCCCTTCTGGTTTCCTCAGTGTGTATGCCCAGCAGTGGGATTGCTGGATCATAAGGCAGTTCTATTTCCAGTTTTTTAAGGAATCTCCACACTGTTCTCCATAGTGGCTGTACTAGTTTGCATCCCCACCAACAGTGTAAGAGGGTTCCTTTTTCTCCACACCCTCTCCAGCATTTATTATTTGTAGACTTTTGGGTCGCAGCCATTCTGACTGGTGTGAAATGGTACCTCATAGTGGTTTTGATTTGCATTTCTCTGATAATGAGTGATGTTGAGCATCTTTTCATGTGTTTTTTTATTATAATTACTAGAAAGGCTATAGTATATCAAATGTTATGTTGAGAATTCTGAAATATTGAACAGCTTTACACTGAAATTCTAGAAACACAAAAATATGAAGCATAAAAGACTAAATCAGTTCAGTTCAATTCAGTTCAGTCACTCAGTCGTGTCAGACTCTTTGTGACCCCATGAATCGCAGCATGCCAGGCCTCCCTGTCCATCATCAACTCCTGGAGTTCACTCAAACTCACGTCCATCGAGTCAGTGATGCCATCCAACCATCTCATCCTCTGTCATACCCTTTTCCTCCTGCCCCCAATCCCTCCCAGCATCAGAGTCTAAATAGGCTGTTATAAAATTCCATTTGTAGACAAGACTTTAGTCAGCAGGTAATAATTTTAGGAAAAACATGTTGAACACTAAATTTTACTTAAATGGAGCAGGTTTGGAGAATTTTTTATAAGGATTTTGGTGCTGTGTATTATTTTTTTTTTATAGGGAAAGATCACTTGAGGAGAGGATATGCATTAGAGCTTCTCAGAAGAAAATAACCTAAAAAAAAGTCTGAAAAATTGCTGAGCCTGCAGAGAGCTTGATCTCTGAAACTGATAAGAAAGGAGTCCATGATTGGAAATACTATGCCAAAGATTAAACCCTCAACTTTTTAGAAACTTCATAAGTCTATGTGTCAGGCCATGGGGGCATAAAGCATTTTGCTTGTATGTAGAAGTAGTCAGCCTTATAGCAAATACCAAACAGAAGGACAGTCATCTTTAAAAGAGTTAATAGAATTCATTCCAACAAAATTGACAGTGTGAAGATTACTTTGGCATTGCCAGATAGAAAGTAACAGCACTCAACATGAAGGTAAATAGCAAAACCATTAGTGTGGGTGGACTGCTGAGAAAGAGAGTAGACACAAGTAAAACTGAATTGGGGAGAAAAAATAATAATATTGTAAAACCATTATAAATAGTTTTCCGTTTAACTGTCTCATAGAAACTACACTCAGAACAGTTCATTAATGTCAGAATTCCATGGAACCTAAATAAAATTTTAATTCATTAATGTATTTGATTTAAAGAGAATCTTATTTTTGGTGCTTTATGATTAGGTATATAAAAATAAAAATGTATTTTCCAAATGTTATTTAAAGTTTTATATATTTAAAGCAAAGATAATTTTCTTTATTGTTGATTTGTTTGGGATTTATACAAATGTCAGATAATGTCTCTGCTTGTCTCAAAGGTTTTACAGATTTTCAGAATCTACTGCAGCAATGAAATTTATCAGGAAAACCTCAATAAGTAATTTAAATAATTGAATTAAAAGAATTTTAAAAGACTTTATGCTCAAAGAGTAGTATAATCACAAAATATATTCAGTAAGTTACTTAAAATATGTATAATGGATTTGCCTATATCCTAGGTGATAAAGAATATATACTATAAATGTAAATGTAGATGTGGCATGTGCATAAAATTGCTAATGATAAAAGATCACTATTTCCTGTGAAAAATAAAACTGAAACAAACCAGTAAAATTGCTACCACAGTCCCCCCAAATTACAAATAACACCACTTCCTTAGAATGTGAAAGAAAACACAAAAATATTCTTGCCTTAATTCATACATATATGCATTTGCTATTAGACATATTTTTCTAATACTTTCCAAATTCACATTTGATTTCAAAAGTTCCAAAGACAAAATATGCCATTATTTTTATCAAAGCATGTAGCTACAAATTAGGTTGTCATTCAATCTAGTCATAATTAATCTTCACAAGGAATGCAAGGAGCCAGTAACAATTCAGCAACATTTATAGAATGTGTAGTATATGCTAAATCTCACATAGAAAATAACATATAAGACAGTTTTTAGGTTATGGTTAAAGATGAATGCAAACACCTGAAAGGAATATTTAAATAATATATAGTAAGGAAAGTGATAGAGATAGGCAAACGTTGCTATGAATACCAGGTTGTTCTAGAGAGAGCTGCCATAAAGCCCTGGCTGAAAATTTCTAGGAAAACTCCCTGGTGTGTGCTCAGTCACTCTGTCATTTCTGACTCTTTGTGACCCCACAGACTGTAGTGGCCAGGCGCCTCTGTTCATGGGATTTTCCAGGCAAGAATACTGGAGTGGATTGCCATTTCCTTCTCCAAGGCATCTTCTCAACCCAGGGATGGAACCCATGTCTTTTGAGTCTCCTGTATTGGCAGGCGAATTCTTTACTACTGGAAACTCCCTAGAGGTAGTGATGAATCTTGAGACATAATAAAGAGGCACACAGATGTAGAAGGGAAACAGACACTTCAGGAAAAACAAATAGGATGCATGCTGCTGCTGCTGCTAAGTTGCTTCAGTCGTGTCCGACTCTGTGCGACCCCATAGATGGCAGCCCACCAGGCTCCCCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGGGAAGTCGCTCAGTCATGTCTGACTCTTAGCGACCCCATGGACCGCAGCCCACCAGGCTCCTCTGTCCATGGGATTTTCCAGGCAAGAGTACTGGAGGGGGGTTCCATTGCCTTCTCCAAATAGGATGCATAAATGCATGTTAATACAAGGAACAACTAAATAATTATTTGAGTGTAAATTATGTGTATAGATTGGTGGTTGATGCAAATGGAAAGGTTGCAAGGGTTAAGGCATGAAAGCTGTACTGGAGTCAGGGCATTATCTTTTAGGCAGTGTGAAGTAACAGCAGAATTTTATGCATGGGTATAATCTGATAGGGCTTCCCCAGTGGCTTAGCAGTAAAGAATCCACCTGCAGTGCAGGACACGCAGGTTCAGTCCCTTGGTGGAGAAGATACCCTGGAAGAGGGCATGGAAACCCACTCCAGTATTCTTGCCTGGAAAACCCCATGGACAGAGGATCCTGGCAGGCTATGGCCCATAGGGTCACAAAGACTCAGATACAACTGAAGGGATTTACTTGGAAGATGTATTGGAGGAAATAGATTACACTGTATGTGTCCTCAGTCACTTGGTGATGTCCGACTATGCTAGATTATACTAGAGGCATGAAAAACAAACCAAAAAAAGCAATAATTCTGGAGGCATTTAAGAGTCAGATCTAAAAATGTGGTATTAGAGAAGAAAAGATAGAGTGAAATATCTATGAAGAACTATGAAATGGTGTCTTGGTAGTGCTTACTGATAGACTGGAGTCAAAGGGGCAGTGAAGAAAAGGAAGAATCTTGTGTTCCTACCTTGGGAATATATGTGGATGGATAATAGTGACAATTAAACAACCTAGGAATATAGGAGAGATTTGAGTTAAGGTTTGGGTATATTGGATATTCTGTGTTTGATGTACCCATAGGCTATCAGGTAGAGAGATAAATCAGTAAGCTTGGAGATATGGTTTAGAATTAATCAGGGAAATCTGCTGGAGATGATAGGAAAAAGGAGTTATCAGTATATAAGTGGAAGATAAAGTAACAGTTTGGATATGGAATTAAAAGATGTCAAGGTCCTTGGAAGGAAAGTTATGACCAATCTAGACAGCATATGAAAAGCAGAGACATTACTTTGCCAACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGTCATGTATGGATGTGAGAGTTGGACTGTGAAGAAAGCTGAGCACCAAATAATTGATGCTTTTGAACTGTGGTTTTGGAGAAGACTCTCTTTAATCCCTTGGACTGCAAGGAGATCCAACCAGTCCATCCTTAAGGAGATCAGTCCTGAGTGTTCATTGGAAGGAAGATGCTAAAGCTGAAACTCCAATACTTTGGCCACCTCATGCAAAGTGTTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGGGGGCAGGAGGAGAAGGGGACGACAGAGGATGAGATGGCTGGATGGCATCACCAACTCGATGGATATGAGTCTGAGTAAACTCCGTGAGTTGGTGATGGACAGGGAGGCCTGGAGTGCTGCGATTCATGGGGTCACAAAAAGTCAGACATGACTGAGCGACTGAACTGACTGAACTGAATGGGAAGAATGTAATAGAGTGTAAATTAGAGATGATTATGGAAGTAATTCAGGAAAATTACCAAAATTATAAGATGAAGTGAAAGTGTTGCTTGCCAATAAAACTGAGGTCTGTACAAAGACATCAAAAAAAAAAAAACAGTGAAATTCCAAAAGGAGAGTGAGTTTAAGGTGAAAGTCAACAGTTAAGGATGATTACAGATATGAAGAGAAAGATAAAGACAGAAATTGCATCTTTGTTGTCAGTACCAAAGTCATCTGAGGATGAGCTAAGAAGGGTTTGTGTCAGAGGCAAGGGGGCTAAGAGAAATAGCAATGGCTGGAGAGAGAATGAGAAGTGGGGAGGAACAAATAAAGACATCGAGAATCCCTAAGGAATTAAAAGATTATTGTCTCTCTGTAATTTAAAATGAAAAAATTCTATGCCTGACATAAGTTTTCTCAGGATAAATACTTTGGTGCTTTTCTTTGAAAAATAAGAAACCATATTTTTTTTTCCAATGTGACATTCTTTGCTAATTATGTTAGTCTGCCTATAGGTACATATAGTACATATGTGATGAAAGAGAATGAGATTAGACTCTTTTTTAGAAGGCTTAGTTGTAAAATAAAAATAAATAAATTCAAAATAATTAAGGAGATAATTTTATTAAAATGAATTATTATAGAATTTTACCATTGTAATATATAGCAATAACAAATCACTAAGTAATACACCAAGAACTAACAGAGTGTTGTAGGTCTATTGTAATTCAAAAACAATCAAAGTCATAGAAAAAGTGATCAGATTTGTGGTTACCAGAGTCAGGGAGTTGGGGAAAGCCACTTGTATGAAGATGGTTAAAAACACAGGATATTTAGCTATCCAGTTAATAAGTCCTAGTGATATAATGTATAATATGATATGAAACACAACTGTATCTTATATGAATATGTAACAATTGTTAGAGTAAATCTTAAGAGTTCTAATCACAAGAATTTTAATTTTTTCTTTAATTTTTTATCTCTATGATAAGACAGATGTTCACTCAATTCATTGTGGTGATCATTTGCAAGCTAAAAACGGTTATTACAGGATGGGGGCAGGAACAGACTACTGTGATAGGAAAACATGTGAAAGTAACATCTTCAAGCATCTGAGAAATTAGGAAAAAGGGATTTTGCTCTTATAGAAAAGAGTACACAAGGTGAAAAAAGAGCAAGGTGTGGGAAGTGAGTTGAAAGGGTGGCCCAGAATGTTGTTCTCTGGGTCCAGCCTGTCCTTAGGTTGTGTGCCGGCTCAAGGCTGAAGGAGAACCAGAGTCCAAGAACCTAGAGAAAGGAGAGAAAATTGAGCAAAGTTTGGTTGTATGCAGCTTATTGTGATTGATCTGTGAGTACAAGCAATTCAACTAATCATTTGAGTCAAAGAAAGGGAGTTTACAAGGTCTTTGCCTGGTTTTGTCACAGAAAACTGAGGGGTCTTATTTAGGATGTTTTATCTAAGATAAGTGAACCTTATATAGTTAGATGGTAAGGAGAGGATATTCACTGTGAACCCATATAACCAAACACAGAAGGATAAAGGAATTTCTTAACTGTTAGGTAAAATTCAATATTTTCAGCTGAAAAAAAAAAAAAAAAAAAAGTGAAAGGAAATAGGTTAGAGGGAGCTTTGTTTTATTTTTAGGATGAAAGAGATTTGAGTACCTGTGGACAACAAGGAAGAAGCCAGAGAATAAAGGAGATGAATGAACATAATTCTCAAAAAGAGAAACTGTGTGACCAAATGTAGGGTGTTATCCTGGATTAACAGGAGGGACTCATTACCCTCTGATGATAGAGAAAAATACTCAGGGAGCATTAAAGTTTGAAGAGGGAGATCTAGAGAAAGCTGAGATAGTCTGTTTAATCATTTGATATGATATCACAAAAACATACAGGTGATAGGGTAAATAAATTAAGGCTAAGCAAATAAATATTCTAGGCAGAGTAGTCATCTGTTGTTACAGTGACACTGAGGGCAAGGTTGCAGAAGGTCATAGGGAAGTGAAATAGCAGGCACCCATTATTTAGATGCTTCAATTCAGTTCGGTTCAGTTGCTCAGTCGTGTCCGACTCTGTGACCCCATGAATTGCAGCACGCCAGGCCTCCCTGTCCATCACCAACTTCTGGAGTTCACCCAAACTCATGTCCATCGAGTCAGTGATGCCATCCAGCCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCCCCAATCCCTCCCAGCATCAGAGTCTTTTCCAATGAGTCAACTCTTCGCATGAGGTGGCCAAAGTACTGCAGTTTCAGCTTTAGCATCAGTCCTTCCAAAGAATACCCAGGGCTGATCTCCTTTAGGATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACAGTTCAAAAGCATCAATTCTTCAGCGCTCAGCCTTCTTCACAGTCCAACTCTCACATCCATACATGACCACTGGAAAAACCATAGCCTTGACTAGATGAACCTTTGTTGGCAAAGTAATGTCTCTGCTTTTGAATATGCTATCTAGGTTGGTCATAACTTTCTTTCCAAAGAGTAAGCGTCTTTTAATTTCATGGCTGCAGTCACCATCTGCAGTGATTTTAGATGATAAAGATTACCAAATTCTAATAATATTACATATCTGGGCTCAGGCAAAGAACAAAAATCTGAAATGTTGCCAGAATCAAAATTCTCCTTTGAAAACCAGTTTTGTGCTGTCAAAAGAATCCAGTATAACTTATAACTCAATGATAAAATTTACCTGTGAAAAACTGTTACTTCAAAGCTGAGATACGAGAATGATGATATATGTGCACGAGACATCATATGGCACCACAAGAACCCCAGTCTCCATCTCAGTCACTCTCTCTCAGGTGCTCACGTGTTTGTTTACCTCCACACTGTCTCACTCCACCACCAGGACCGTCCATACCTCAATTGCTCTAAGTTTCCTAAGCTGCCAACTTTAAATATTATTTTCTTATCAAGCTGTGTTTAACAGGCACTAACAATAATCCCTTAAAGAATCTATTCTCTGAATTTCTCTGACAGTTTTTTGGACCTCTCCACTGAAGTGTTACAGAAACCTTTGTCAGGCCATTATAATAACTGTGGTAACTGTCCATTTTCGTTAACAAGTCAGGAAACTAGAATTTAAGAATGTCCTAACATTCAGTTTGTTCTGTGCTGTGCTTAGTCACTCAGACGTGTCTCTTTGTGATCCCCTGGACTCTAGCCCGTCAGGCTCCTCTCTCCATCCAGGCTCTCTAGGCAAGGATACTGGAATGGGTTGTTATGCCCTCACTCAGTGGATCTTCCTGAACCAGGGATCAAACCCAGGTCTCCTGCATTGCAGGCAGATTCTTTACCAGCTAAGCTACCAGGGAAGTCCTAACATTCAGTTTAGGAGTGTTTTATTATAAAGTTATATTGGTTCTCAGTTATCCATTTTCACATGTTAACTATTATCAAAGCCTCTTCTTCCATAAATAAAGGTATCAGGGAACATTTGAAAATGAACCAAATACTTCATATTCTATTATCCCACATATTACTAGAGATTTTGCTTTGCTTTGTTTCTATCTTTTTTTCTCGGTAACCTTCAGAGTTTTTCTTAGTAATTATGAGGAAATCATTTTTACTCCTCTTAATGTGTTTCTTTTATAAGAATCAAAATAGTAATAGCAAGGGAGAGAAGTATAAATGTAACTTTTTCTTGTCTTTTAAATCCAATAAAGGAGCTAAATTCTCTCTATGCATGTATTTAGTATTTTAATGGTCTTTCTTGAAAAATCATGCAGTATTTAAGCATCCAGTACTATAAAAAATTGAGTTTGTACAAAAACCTCTAAACTTTTTTAGATATGTGTTTTCTAAATACTGATAGATAATTTTATTAATCACTTAAGGGATTTTGTTTGTTTGTTTTAAA
Seq C2 exon
TTAAAGCACCCTGTGGAGGCAATTTAACAGGATCTTCAGGATTTATTCTTTCGCCAAACTTCCCTCATCCATATCCCCATAGTAGGGACTGTGACTGGACCATCACCGTCAATGCAGACTATGTTATCTCCTTGGCATTTATCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000038281:ENSBTAT00000027766:22
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.277 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0008415=Sushi=WD(100=87.7)
A:
NA
C2:
PF0043115=CUB=PU(41.5=89.8)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Rat
(rn6)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development