Special

ENSMUSG00000022311 @ mm10

Biotype
protein_coding
Gene Symbol
Csmd3
Description
CUB and Sushi multiple domains 3 [Source:MGI Symbol;Acc:MGI:2386403]
Coordinates
chr15:47580637-48792063:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
-
22.82
17.75
0
Alternative 5'ss
8
chr15:47947979-47947986
-
77.18
17.75
0
Exon Skipping
96
chr15:47755386-47755481
-
42.85
20.01
0
Exon Skipping
312
chr15:48313799-48314110
-
28.42
29.34
0
Exon Skipping
78
chr15:48292778-48292855
-
82.36
44.31
0
Exon Skipping
157
chr15:47899709-47899865
-
91.09
100
0
Exon Skipping
113
chr15:48151561-48151673
-
97.17
19.44
0
Exon Skipping
195
chr15:48001467-48001661
-
89.98
95.96
0
Exon Skipping
188
chr15:47976866-47977053
-
90.88
100
0
Exon Skipping
189
chr15:47969998-47970186
-
90.51
100
0
Exon Skipping
117
chr15:47954935-47955051
-
84.86
100
0
Exon Skipping
216
chr15:47949921-47950136
-
91.58
97.56
0
Exon Skipping
114
chr15:47755968-47756081
-
44.73
49.58
0
Intron Retention
7969
chr15:47849821-47857789
-
11.02
20.7
0
Intron Retention
64270
chr15:47756082-47820351
-
8.83
20.79
0
Intron Retention
1467
chr15:47753919-47755385
-
11.08
32.96
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000164796 CSMD3 1-to-1
Human hg19 ENSG00000164796 CSMD3 1-to-1
Cow bosTau6 ENSBTAG00000038281 CSMD3 1-to-1
Chicken galGal4 ENSGALG00000016111 CSMD3 1-to-1
Chicken galGal3 ENSGALG00000016111 CSMD3 1-to-1
Zebrafish danRer10 ENSDARG00000077905 si:ch211-236p22.1 1-to-2
Zebrafish danRer10 ENSDARG00000077920 CSMD3 1-to-2
Fruitfly dm6 FBgn0001083 fw 4-to-1