Special

FBgn0001083 @ dm6

Biotype
protein_coding
Gene Symbol
fw
Description
The gene furrowed is referred to in FlyBase by the symbol Dmelfw (CG1500, FBgn0001083). It is a protein_coding_gene from Dmel. It has 4 annotated transcripts and 4 polypeptides (2 unique). Gene sequence location is X:11992915..12003914. Its molecular function is described by: carbohydrate binding. It is involved in the biological process described with 6 unique terms, many of which group under: biological regulation; cell-cell adhesion via plasma-membrane adhesion molecules; eye morphogenesis; regulation of biological quality; homophilic cell adhesion via plasma membrane adhesion molecules. 38 alleles are reported. The phenotypes of these alleles manifest in: sensory system neuron; pupal spiracle; ovary; excretory system; epithelial cell. The phenotypic classes of alleles include: fertile; increased mortality; phenotype; visible. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of extremely low expression. Peak expression observed during late pupal stages.
Coordinates
chrX:11992915-12003914:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
146
chrX:12002242-12002387
-
9.64
35
0
Alternative 3'ss
236
chrX:12002242-12002477
-
16.07
40.42
0
Alternative 3'ss
278
chrX:12002242-12002519
-
65.93
69.17
0
Intron Retention
1227
chrX:12002520-12003746
-
15.55
34.61
0
Intron Retention
64
chrX:11995121-11995184
-
6.52
87.1
0
Intron Retention
72
chrX:11996569-11996640
-
5.42
57.96
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000121904 CSMD2 1-to-4
Human hg38 ENSG00000164796 CSMD3 1-to-4
Human hg38 ENSG00000165124 SVEP1 1-to-4
Human hg38 ENSG00000183117 CSMD1 1-to-4
Human hg19 ENSG00000121904 CSMD2 1-to-4
Human hg19 ENSG00000164796 CSMD3 1-to-4
Human hg19 ENSG00000165124 SVEP1 1-to-4
Human hg19 ENSG00000183117 CSMD1 1-to-4
Mouse mm10 ENSMUSG00000022311 Csmd3 1-to-4
Mouse mm10 ENSMUSG00000028369 Svep1 1-to-4
Mouse mm10 ENSMUSG00000028804 Csmd2 1-to-4
Mouse mm10 ENSMUSG00000060924 Csmd1 1-to-4
Mouse mm9 ENSMUSG00000022311 Csmd3 1-to-4
Mouse mm9 ENSMUSG00000028369 Svep1 1-to-4
Mouse mm9 ENSMUSG00000028804 Csmd2 1-to-4
Mouse mm9 ENSMUSG00000060924 Csmd1 1-to-4
Rat rn6 ENSRNOG00000002723 Sele 2-to-3
Rat rn6 ENSRNOG00000002776 Sell 2-to-3
Rat rn6 ENSRNOG00000002794 Selp 2-to-3
Cow bosTau6 ENSBTAG00000005784 CSMD2 1-to-4
Cow bosTau6 ENSBTAG00000009739 CSMD1 1-to-4
Cow bosTau6 ENSBTAG00000020243 SVEP1 1-to-4
Cow bosTau6 ENSBTAG00000038281 CSMD3 1-to-4
Chicken galGal4 ENSGALG00000001175 C4BPA 1-to-5
Chicken galGal4 ENSGALG00000015721 SVEP1 1-to-5
Chicken galGal3 ENSGALG00000001175 C4BPA 1-to-5
Chicken galGal3 ENSGALG00000015721 SVEP1 1-to-5
Zebrafish danRer10 ENSDARG00000001559 csmd2 1-to-4
Zebrafish danRer10 ENSDARG00000013526 SVEP1 1-to-4
Zebrafish danRer10 ENSDARG00000077905 si:ch211-236p22.1 1-to-4
Zebrafish danRer10 ENSDARG00000077920 CSMD3 1-to-4