Special

ENSMUSG00000060924 @ mm10

Biotype
protein_coding
Gene Symbol
Csmd1
Description
CUB and Sushi multiple domains 1 [Source:MGI Symbol;Acc:MGI:2137383]
Coordinates
chr8:15892537-17535586:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
-
21.33
20.9
0
Alternative 5'ss
8
chr8:16196080-16196087
-
78.67
20.9
0
Exon Skipping
114
chr8:15998752-15998865
-
98.15
11.49
0
Exon Skipping
45
chr8:15909130-15909174
-
54.52
60.22
0
Exon Skipping
113
chr8:16501280-16501392
-
92.95
88.52
0
Intron Retention
21354
chr8:16037309-16058662
-
7
23.66
0
Intron Retention
1888
chr8:16000627-16002514
-
15.65
33.7
0
Intron Retention
5969
chr8:15992783-15998751
-
6.89
26.25
0
Intron Retention
3379
chr8:15921906-15925284
-
8.16
37.83
0
Intron Retention
515
chr8:15921214-15921728
-
7.81
35.38
0
Intron Retention
4796
chr8:15895877-15900672
-
11.28
32.08
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000183117 CSMD1 1-to-1
Human hg19 ENSG00000183117 CSMD1 1-to-1
Rat rn6 ENSRNOG00000030719 Csmd1 1-to-1
Cow bosTau6 ENSBTAG00000009739 CSMD1 1-to-1
Chicken galGal4 ENSGALG00000016341 CSMD1 1-to-1
Chicken galGal3 ENSGALG00000016341 CSMD1 1-to-1
Fruitfly dm6 FBgn0001083 fw 4-to-1