BtaINT0112900 @ bosTau6
Intron Retention
Gene
ENSBTAG00000032515 | PLA2R1
Description
Bos taurus phospholipase A2 receptor 1, 180kDa (PLA2R1), mRNA. [Source:RefSeq mRNA;Acc:NM_175051]
Coordinates
chr2:36397902-36411669:+
Coord C1 exon
chr2:36397902-36398075
Coord A exon
chr2:36398076-36411495
Coord C2 exon
chr2:36411496-36411669
Length
13420 bp
Sequences
Splice sites
5' ss Seq
CTAGTAAGA
5' ss Score
5.2
3' ss Seq
CTAATGGATTTTGTTTTCAGCAT
3' ss Score
5.88
Exon sequences
Seq C1 exon
ATTTGTACACAATCAAAGGGAATGCCCATGGGACTCCGTGCATGTTCCCCTTCCAGTACAATCAGCAGTGGCACCACGAATGTACCCGGGAAGGACGGGAAGACAACTTGCTGTGGTGTGCCACTACCAGCCGATACGAAAGAGACGAGAAGTGGGGATTTTGCCCAGATCCTA
Seq A exon
GTAAGAATAAAATCTAGTCTTCCCTATATGTCATGAATGAATCAAGGATGATTAGAAAGTTATTATATCCAAAGAAAAGCACTGAGATTGAGCTATTGAAGTCTGAATAAGCTTGCTGAATCCACTTAACCAGATTTTGATTTTGTTTGTTTTTGCCTTGAAAAGACAATTCTGATGTATATTGCTTTTTCCCCCCTAAGTTCAAAGATATTAATTAGTCATTCCTCACTAAGTTCAGTGCATAAATATGCTTTAACTGGAATCAAATTTTAATACTCTGTGATTTCATTAATTCCAGCTTCCAGGCCGGATACTTCAAAACAAAACTGAATGCATATGAAGTTTTGCTATCCTTCCAGTCCACTCCTTCTTATGAGCTCCTTCACCTATCCAAGTCCTGATTGCTTGTCCTGCTCATTGTCAAGCCCAAACATCAGCTGGCCCTTGATGATCTTTTTAAAATCACAGTTGCCCTCCCAGTATTTCTCAACAGTGATTCCCTTTCCTTATTACTCAGTTTCTAGCTATAACTTTAAACTCTTTTTCTCTACTTAACCTGATTTTCAAGGTCCAGTAATAGCTTCAATGTTCTAAATATTTTGTCAGTAAGTACTGTATTATTTTATTGTATTTTCATTTAGCTTAAAAGTTGCCAATGGTCCTTAAGTACTGGGGAATGTTTATATATATCTTCTATTTTCTTTCTTATTTATTTATTTTTGGCTCTGCTGAGTCTTCATTGCTGCAAGGACTTTTCTCTTTTTCACTCTCTCTTTCACTTTCATCAAGAAGCTCTTTAGTTCTTTGCTTTCTGCCATAAGGGTTGTGTCATCTGCATATCTGAGGTTATTAATACTTCTCCTGACAATCTTGATTCCAGCTTGTGCTTCATCCAGCCTAGCATTTTGCATGATGTTCTCTGCATATAAATAAGCAGGGTGACAATATACAGCCTTGACATACTCCTTTCCTGATTTAGAACCAGTATGTTGTTCCCTGTCCAGTTCTGTTGCTTCTTGACCTGGATACAGATTTCTCTGGAGGCAGGCAAGGTGGTCTGGTATTCCCATCTCTTTCAGAATTTTCCATAGTTCGTTGTGATCCACACAGTCAAAGGCTTTGGTGTAGTTAATAAAGCAGAAGTAGATGTTTTTCTGGAACTCTCTTGCTTTTAGATGATCCAATGGATGTTGACAATTTGACCTCTGGTTCCACTGCCTTTCTAAATCCAGCTTGAACATCTAGAAGTTTACGGTTCACATACTGTTGAAGCCTGGCTTGGAGAATTTTGAGCATTACTTTGCTAGTGTGTGAGATGAGTGCAATTGAGCAGTATTTTGAACATTCTTTGGCATTGCCTTTCTTTGGGATTGGAATGAAAACTGACCTTTTCCAGTCCTGTGGCCACTGCTACATTTTCCAAATTTGCTGGCATATTGAGTGCAGTATTTTCACAGCAATATCTTTTAGGATTTGAAATAGCTCAGCTGGAATTCCATCACCTCCACTAGCTTTGTTCGTAGTGATGCTTCCTAAGACCCACTTGACTTCACATTCCAGGATGTCTGGCTCTAGGTGAGTGATCACACCATCATGGTTATCTGGGTCATGAAGGTCTTTTTTGTACAGTTCTGTGTATTCTTGCCACCTCTTCTTAATATCTTCTGCTTCTGTTAGGTCCATACAATTTCTGTCCTTTATTGTGCCCATCTTTGCATGAAATATTCCCTTGGTATCTCTAATTTTCTTGAAGAGATTTCTAGTCTTTCCCATTTTATTGTTTCCTGTATTTCTTTGCATTGATCACTGAGGAGGTCTTTCTTATCTCTCCTTGCTATTCTTTGGAACTCTGCATTCAAATGGGTATATCTTTCCTTTTCTCCTTTGCCTTTAACTTCTCTTCTTTTCTCAGATAAATAAGCCCTCCTCAGACAACCATTTTGCCTTTTTGCATTTCTTTTTCTTGGGAATGATCTTGATCACTGTCTCCTATACAATGTCACAAACCTCTGTCCATAGTTCTTCAGGCACTCTGTCTATCAGATCTAATCTCTTGAATATACTTGTCACTTCCCCTGTATAATCATAAGGAATTTTATTTAGGTCATACCTGAATGGTCTAGTGGTTTTCCCTACTTTCTTCAATTTAAGTCTGAATTTTGCAATAAGGAGTTCATGATCTGAGCCACAGACAAGTCAGCTTGTTTTTGCTGACTGTATAGAGCTTCTCCATCTTTGGCTGCAAAGAATATAATCGATCTGATTTTGGTATTGATCATCTGGTGATGTCCATATACAGAATCTTCTCTTATGTTGTTGGAAGAGGGTGCTTGCTATGACCAGTGTGTTCTCTTGGCAAAACTCTGTTAGCCTTTGCCCAGCTTCATTTTGTACCCCAAGGCCAAATTTCCCTGTTACTCCAGGTATTTCTTGACTTCGTACTTTTGCATTGAATCCCCTACAATGAAAAGGACATCTTTTTGGGGTATTAGTTCTAGAAGGTCTTGTAGGTCTTCATAGAACTGTTCAACTTCAGCTTCTTCAGCATTACTGGTTGGGGCATAGACTTGGATTACTGTGATATTGAATGGTTTCCCTTGGAAATGAAGAGATCATTCGTTGTTTTTGAGATTGCATCCAAGTACTGCATTTCGGACTCTTTTGTTGACTATGAGGGCTACTCCATTTCTTCTAAGGGATTCTTGCCCACAATAGTAGATATAATGGTCATCTGAGTTAAATTCACTGATTCCAATCCATTTTAGTTCACTGATTCCTAACATGTCGACATTCACTCTTGCCATCTCCTGTTTGACCACTTCCAATTTACCTTGATTCACAGTGTTGGAGAAGACTCTTGACGGTCGCTTGGACTGCAAGGAGATCTAACCAGTCCATCCTAAGGGAGATCAGTCCTGGTTGTTCATTGAAAGGACTGATGTTGAAGTTGAAACTCCAATACTTTTGCCACCTGATGCAAAGAGCTGACTCATTTGAAAAGACCCTGATTCTGGGAAAGATTGAGGAAGGAGAAGAAGGTGACAACAGAGGATGAGATGGTTGGATGGCATCACCGATTACATGGACATGAGTTTAGGTAAACCTCAGGAATTGGTGATGGATAGGGAGGCCTGGCGTGCTGCAGTTCATGGGGTCACAAAGAGTCGGACACAACTGAGCGACTGAACTGAACTGAACCAATGTACCTAACATTCCAGGTTCCTGTTGCAATATTGTTCTTTACAGCATCGGATTTTACTTCCATCACCAATCACATCCAAAACTGGATGTTGTTTTTGCTTTGGCTCCATCTCTTCATTCTTTCTGGAGTTATTTCTCCACTCTTCTCCAGTAGCATATTGGGCACCTACCAACCTGGGGAATTCATCTTTCAGTGTCCTATCTTTTTGCCTTTTCGTAACTGTTCATGGTGTTCTCAAGTCAAGAATACTGAAGTGGTTTGCCATTTCCTTCTCCAGTGGACCATGTTTTGTCAGAACTCTCCACCATGACCTGTCTGTTTTGAGTGGCCCTACATGGCATGGCTCATAGTTTCATTGAGTTAGACAAGGCTGTGGCCCATGTGATCAGTTTCATTAGATAAGCATCTAAGCTACTTTTCATAGTACTTAGTACTCACCAGGATTACCACCACCATCATCATGTCACCATTAGGTCTAACATCCTTTCAACATGTGCTTCTGAATCAATGATCCTTCCTCTTTATCATCTTTGTCACCAGCACTAATTAAGCATAGCGTTAGTGAAAGGTTGTTGTAGAATCACGAGAAGACACCGGGATTCTTGGCCCCGGGAGGAGAAGAATTCAATCCGGGGTCAGAGACGAGGCTTGATCGCTCAGAGCTTTTGTGTAATAAAGTTTTATTAAAGTATAAAGGAGATAGAGAAAGCTTCTGACATAAGCATCAGAAGGGGGCAGAAAGAGTACCCGCTTGCTAGTGTTAGCAATGAAGTTATATACTCTCCAATGAATCCAAAGAATGTCTGGAGGTTGTAAAGACCTCACCAGACCTACTCACATAATTTACATTTTAAGATAACAGAATTAGCCAGAAGGTTTAATTCAGAGACTGTCCTCAGGCAGGATACATTATTGTTATATAATCCTAAGGAATATAGAGAAGGAAAAAAAGTTTGTCCTTTCTTCCTCCTTGAGAATTCCAGACCCCTCTCTCCTTGGGGACCCCTAGACTCCTTATCAACCTGCCTAGGAAATGACTCTCTCATTAGGACTTAGATTCCTCTCTCCAAAGAACTTGGCCCAGATGGAATACAGGACAGACAGATTTGTTCCATGCCTGGAAATGGAGACTACATTTGATAGGACGCTCTAGAATCATATAGTTTAAAATGTAGATCCTTGTCCAGTCCTGGAGATGCAATGAGCATTTACATTTTTGACAAATGGCCCAGGTGATCAACATGCAAGTAATTCCACATAATATCTATATACAGGGGTGATATTAAGACACTTAGCAACCAATTTGGTATGGACTATTGGCCAATTTAAGTGGAGACCTTAATGTGGAGGCTTGGAGTCCTGGACACCCACTACTGGTATTAGCCCCTTATCTGCTGTAATGTGAGGGGATGCTGAGGCAGCAAGAGGCACTTGATGAGCTCAGGAGAGCAGCTCTTCACCAATCAGCATGAAAGTATTTCATTATTTATTAACTGTCAGATCATTAGCCTTCTCTATCTGAATCTGAATGTCTCTGAATGTCTGTGTGGAGGAATATGTGCATGTAATCCCTACACTCCTTAGATCCTTGAGTCTGATGTCACATTTTTTACATCATCTTCTCTTTCTGTTTCCATCTCCAATAGATGTCATTATTAAAAGTAAATAAACAGAGCCCTGGTTTGAGTTCCCTGAGTCATACAGCAAATTCCCACTGGCTATCTATTTTAGATACGTTAGTGTATCTGTTTCCATGCTACTCTCTCCATTAGTGGGAAGAAGGCTCAAGAGGGAGGGGATATATGTATACGTATGACTGATCTATGTTGATGTATGGCAGAAACCAGCACAATATTGTAACTCAAACATCTTACAATAAAATTTTTTTAGGAAATAAATAAGCAAATATTAATAAAAGTAACATGTATTTCACATAGCCCTAATACTATTTTTTAAACTATACTAGTCTCTTTGATGGAGAAGGAAATGGCACCCCACTCCAGTACTCTTGCCTGGAAAATCCCATGGATGGAGGACCCTGGTGGGCCGCAGTCCATGGGGTCGCTTAGAGTCAGACACGACTGAGCGACTTCACTTTCACTTTTCACTTTCATACATTGGGGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGAGAGCCTGGTGAGCTGCCGTCTATAGGGTCGCACAGAGTTGAATATGACTGAAGCGACTTAGCAGCAGCAGCAACAACAGACACCTTGAGATTCTCCAAAGAACACTGTCACCATCCTCTGTCACTTTTAGCCAATTATCATTTCCCAGGTGGAAGCCTGGGTTTAGTGGTGCCCAGGGCTTTTAGATCCCTGGACTATTTGTTCAGCTTCCTACAGTTCAGAAACATCCTCCACTTGACAGCCTGCCATATTCCAACTCTCTTGCCCTTCACAAAACCAGCAGAGAGAATATTTATTTGTACAATGCTAAATTACAGTTCCAATTTTCTTCCTTTCTTTTACTTTTGGTTCCTGGTAGCCAGCATAACTCAAAATAATGTGCCAGAGACTGGAATCTGAGCACACTGATTGCTTTTTCCATGGGGTCAGGAAGTGGACAGGACAGAGAGATTAAAGCAAAGATTCATACTCCTGTATCTCATCTTTCTTATTCAGAAATTTTTTACTATCTCAATGTAGAATGATGCCTTTATTTTTAAAAAGTTGATTGTAAGTGAACACAGTGTAAATTTAGTCCTAATAAACACATACTAAAACACACGAGCAGGGAGGGATGTGATAAAACTTCTGTTGCTATAGATCTTCAGGAACGAGGATGACATAAAGGAATCTCTCTGGTTTTATTTAGAGGTGATTCTGAGTCATACTATGTCTGTCCTGATTGTATGTCTTACACAGCTGGAGAGTCAGGCTTAGTTAGTTTGAGATATTTTTAGGATACCAGCCTTTGGGTGAAGGCTTCCCCAGTGGCTCAGCATTAAAGAATCTGCCTGCAGTGCAGGAGACACAGGAGACACGAGTTTGATCCCTGGGTCAGGAAGATCCCCTGGAGGAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGAAAGTCCCATGGATGGATTTTCATGGGTCCATGAAAAGCCTGGCAGGCTCGTTGCTCTGGAACCTCATTCACCTGATACAGTTTTTATCAGTAATTTGAATGATAGCACAGATTGGTACCAATTTAGATGTATGACTACCAACCTTTGCTTCATCAGCAGTATTATTATATCTCTCTTCTCAAGCTTCTATCTCACTCCCCAAAGGGCCATATAAATCTTTCTTCTCCCCTGACTTTCTAACCTTGCCCTACATTCTCCTTCCAAACTCTTAAGAGCCGACTTCAAAGAAAATAGGATCCCTCAGAGGGGAAGTTTTGACAACTTCCTGCTCACAGGCCTGCTCTTTAAGCCTACCGTGGTTTGGATCCATCTCTATTTTCTCCCTCCCAAGCAATAGTGGTCCTCCTCCTACCGAGGGCGAATCTCCCCACCTGGACTCTGGAGCCTCCCATCCAATCTTCTCCAACTTTATTTCAGTGTTTCTCAAAGCATGGTCCCTGTTCCAGATTGGAAAGGGAGATGTAACACTATCTCTCTTTGCAGATGTCATGATCTTGGATATATAAAATTCCAAAGAATCCACTAAAAAACTACTATAACTAATAAACTCATTCACAGGACACAAGAGCCATATACAAAAGTCAATTGTACTTTAGTACAGTAGCAATGAACAATCCATAAATTAGATTAAGAAAACAAATCAAACAAAGAGAGAGAAGTCCATTTATCCTAACATCCAAAAGAATAAAATACTTAGGAAAAATTTAACAAATGACATGAAAAACTTACGTCTAAAAACTACAAAACATTGAAAGAAATTAAAGAAAATTAAATAAATGGAAAGACATCCCGTGTTCATGTGAGCAGAAGGCTTTTTATTGGTAAGATGGCACTGCTACAGCAATCTCTATTAATTCCTAGCTGACTCCTTTGCAGAAATTGACAGGCTCTTCCTAAAATTCATATGGAAATTCGAAGGACCCAGAAGAGCCAAAATAACAATGAAAAAGAAGAAAAAAGTTGGAGGACTTAGATTTCTCAATTTCAAAACTTATGGAAAGTTTGAAAATTATCAAAATGGAATAAAACTGAGAGGCCCACACTTATGATTTTTGATTTCTGACAAGGATGCCAAGACAATTCAATGGGGAGAGAATAGTCTTTTCAAAAAATGGTACAGGGAAACTGGATATTCACATCCAAAAGAATAAAATTGAACTTCTGTCTATCACCATATAAAAAACTAACTCAAGATAGATTTTGAAAACTTATATGGAAGAGATAAGACTATAAAACTGTTAGAAGAATCTGTTAGTAAGTTCAGTCGTGTCTGACTCCTTGCGACCCCATGGACTGCAGCACGCCAGGCTTCCCTGTCCATCACCAACTCCCGGAGCTTACTCAAACTCATTCTTCTTAGAAGAATACATAGGGGTAAAGTTTCATGAATTCTTAGATATGACATCAAAATGAAAGCAATGAAAGAAAAAAATAGATAAATTGAACTTCATCAAAATTAAAAATTCTGTGTTTCAAAGGACACAATCAAGAATGTGAAAAGATAACCCACAAAATAGGATAAAATATTTGCAAATCAGATATCTAATAAAGGACCTATGTCTAGAATATATAAAGAAAGCTTGTAACTCAATAAAAAGACAACAGTCCCAATTTAAAAATGGGTAAAATTGTCTGAATAGGCATTTCTCAAAAAAAAAAGAGATTGACAAATGGCCAATAACCAATGAAAAGCACTCAGTATCATGAGCCATTAGGGAAATTAAAACAAAAACCACAGTGAGATACCACTTTACATCTCACACGATGGCCACAATCGAAAAGACAGACTAAAATAACAAGCACTGATAAGGATATAGAGAAATTGGGACTCTCATACACTGCTGGAAGGATTGTAAAAGGATACAGCTGCTTTGGAAAACAGTCTGTCAGTTCCTTAAAAGGGTAAATATTGGGTTACCATATGACCTGCAATTCTCCTAGCTAATTATCCAGGAAAAATGAAAACACATGCCGACACAAAAACTTGCACACAAATGCTTATAACAACATTATTTATAATAGCCAAAAAATAGACACAACCCAATGTCTATCTACTGAGGAATACATTAATAACACATAGTATACCCATACAATGGGATATTATTGGGCTATATAAAGAAATAAAGTATTGGTACATGCTACAACATGGATGGCCCTTGGACACATTATGCTAAGAACCCAGTCACAAAAAGACCACACAGTACAATTCCATTTATGTGAAATTTTCAGAATAAGCCAATCTATAGAGACAGAAACTAGTTTAGTGGTTGTCTCAGACTGGGAGTAGGGGTGAGGACTGAGGGAAAAGTGGGGAGTGATTGCTAATGGACACTGGGTTTCTACAAAAATGTTCTAAACTTGATTGTGGTGATGGCTACACAATGCTTTGAATATACTAAAAACCATTGAACTCTATACTTTACATGGCATGTTATATGGCATGTTAATTGTATCTCAGCAAAACTATTTTTTTTTAAGAGTAAATGGGAGATGAGAAATTGGAGACAGCATATGTATGGAACTATGTGATTAACAGGGGTAGAGAAAAGGCAGAGACTGGGATGGGGCAGCCAAGGGAAGGAGTTTTTTTGTTTCTTGTTTTTTAAAGGTGAGAGACACTAAGTCATCTTTGAGTGCATCTGGAAATGATCAAAGAGAAAGAGGTTGAAGATGCAGGAAAGTGAAACAATTGGTGAAATAAACATGGTCTCTCAGAAGGCAGAAGGAAGTGGGGTCCAGATCCTAGATGGATGGACTAGCCTTTTATGGATGTAAAAACAGCTTCTCCGTAGGAGAGAAGAAAGAGAGCATAGTACAGGTCCAAGAAGGTTGATGGATTAAGTGATGGGGAATATGAGGAGTAACCAGCCCAGACCTGTGGACTTGGAAGAGGGGAAGAAGGCATGAGAAGTTCAGACAACAGGAAAGGTGTGAAATGAACATGGTGGCTGCTGGGAGAGCAAGCTTACTGGAGAAAACTGGTCACATTTCCAGGAAGTTTCAGGGGTGGTTGATAATGAATCAATCAGATGACTTTTCTTGGCAGTGCTCATCAGTTGGATGCAGGCACAGAGCAGGCAAATGATTGGGTTAATCTGCTGAAACAGGCTCCAGAAAGTTACTAATGACTTAGGCCTCACTGTACTCCAAGATTTGACAATAAGTAACAAAACTGATATTATCTCTTTCCTTGGGTTTCTGGGGCCCATGCCTACTAGTTTTCTTCCTTCTTTTGTGGTCACCGCTTCTCATCTTCCTTTGATATCATAGTCTCCTTACCCAACTACCTTTAGGCACTGATGGGGAAAAAGATGGAACATGGTACTGCTTTCCTGATACTTAATTTTATGAGGAAAAACAGACAATCAATAAGCAATCACATAATGCATCATTTAATATCAACTGCGATCAGGGCTACCAAGGAACTTGTATGGCACTGGGAGCAGGAAGTCCTGACTTGGTTTGGTATCCCTTTTACAGGAGATTTACTACCAACACACTTTGCAGGGAACAGATATTCAGTAACTATGTGCCGAGTATATAAAAGACCAAAGAGAGAGAAAATAGTAACTTTGTAGCTTGGAGTTGCTCTAATAGTATGTGTATTTTTTGTTTGTTTGCTTTGTAAGAATTCAACCATTTTTTTAAGTGGCAAGAAAGAGTATACGTGGGACAATAACAAAGCTGTATCCTTAGGGAAGACAAAAAAAGCCATACTAATAGAGAAGGAGAAATGGCTGCATCTCAGTCATGATCTATAATAAAATCAGTATTGACTTGAATACACTTCAGTTCATTAGAAAAGAAGTGTGTTTTGAAAGGGGAAAAAAAATCACCTATTTATAGCATCTTGCAAAAAAGACTTTTGGCAGTCTTTCTTCAAATAATAGGAGATACAGAGATATATATGACATAGTTGTTTCTTTCAAGGAGCTCATAATTTAGTGACAGAAGAGATGATATAAAGACAACCAAAGATGCAAAGAAATATGATGGTTTACATTAGAATTTTTGGAGAAAAAGTAAGAGTACCAGCCTTCAATCTTGTTTTCTCAGTGGCTTGAAAATAAAAATTAGTTATGAAGAAAGCAAGAGGATTAAAAGTAAATACATGCAGATGTCTCATGCCAAGATGGGAACCTCTGACAGGAGGGGTTCCAGGAAGTAGTCTTAGAGGCCAAGATGAACCTGCAGGAGGTCTCTTGGGGAGTAGTCTCAGGCTCGATACATATGGAAAGGAAAGGAAGAAAGCAGGACTGCTCAGGACTGTGATGCAGGACTGGCAACCCCCAGATTGACCCACAAGGAGTTCTCAAGCTGTATTTGGCCCTGGTTGGGGTGAGAGGAGGGGTCTTATAGCTCTGTGGTGACCATCATGGTTTACAAGCTGCTCTTGAGAAGGGAGGGTGACATTGGGCAATGAGCCTCGTCAGCCAAGGCAATCGTTGAAGGAGAGGTGTCTGCTGGCAGGTGGGGAAATACAGCTTGGTCCTGAAGGGAGATCAGAAGAGCACATCACAGTGCCCAGGCCCAGGGTGGCACTTCCATTCCATTTGTTACCATAAGATCCTCAAATAAGATTCGTGGAGTGATACTCAAGCCATCCAGAGGAGCAAAGAGAGGACTGACTGCATAGAAGTGTACATTCTTATATTTAGTTCAAATTTCAATGACAAATGGGCTGACTTGTTAGAAGATTAGGGGCATCTGTTGCAAACATTTGAGATATTCCTTTTGATTAACCTTAAGAATTAGCACAGATAACACCAAGCCAAGGAAAAACTAACAAAACTGAGCTGGGCAATTTGTAGCACAGACAAATCACCTGCAAGCCTTCTATCTTAACTGTTTAAGGTATCGAATTCAGGCTTTGCTGTACAGAATTCAGGTTTCTGCCAAAGGCTGTGTTTACGCAGCTCAATCCATGTGCTGTTGAAAGGGTAGGACCTTTCCTTGCCAGTTTTTGGCAAAAATGGGAACAAGATCGACTGAAGAGTCATCAGGCCTTTTCTTATCCTGACATGGCTTATCCTGGAGGCTTATAGTTAGGACTCGTTATCGAAACTTTCCCCAAGGCAGGAGACAAGAGGCACGTACCGGGTACCCAGATCTCTCCTTTGACATTCTCTCCAGTCTCCTCTTCTGACCTCCTCTCATCTAGTAGCCAGGGGCTATTTGTACCTGCTCTTCTTAGATGTTAGGAAGTCTTAGAAGTCCTTCAGATGTTTTCTTTCAAGCCTGTGTTTCCCAGTATTTGCATTGTGGACCATCTGCATTAGAATGTGGACCAGTGGCATCAGGAATATGTTTGAAAACCAGTTTTCTGAATCCCACCCCAGACCTACCAATTCAGAATCTCTGAGAATGAGAACCAGGAATCTGTGGTTTTTTCAGAAGTCTGCTAAATGATTTTCATGCACAATGAAGCACCACCCTGCTCCTCTCTCATGGACTCAGCTCTCACACAGGATGAATAGGGCTAAAATGAAGTCTGATAATGCTTAGCATGTGTCCCATCTCACAGATGGCATAGCTTTTTAACTGGAAATGGTCTCTAAGGACTCAGACTCAACGTGGAAATTTCAAACATCAGAGCAAGATGATTACTAGAAGCATCCTCCTTCCCTTCTCCTTTCCTACACATTTTCTTTGGTGATACAGACTTGTCTTCTGCTCTCCTTCAATCTTGGATCCTTCTATACATGTGTAGGTCAGGGAACTCGGTAGACAATCTCAGATTTAATATATTTATGTTTAATAACTTCTCATTCACTAACTCAGTACTGGGGAAGGCACGTTGCAACCAGACATGAAAACAAACTTCTGCATTCCCAAGGGAGCCATCTAACTAAGCATTGTGTCAAAAAGAAAGCAAACAGAAAAGATTTCATATTGTCAAATAAGTTTGAAGTATAGTGAATTAAAAGCAAGCCTTTTCTTTACTAGAGAACTTCTCAGAGCCTTTAATATGCTAGTGTACATTGTGAATTCCCCAGAGGAGGTTACATATGCACTACATCCCAGCTTCTCTTGGGGAGCTCTTGAAATTGTAATACTCTGTGGATTGCACTTTGGGAAAGATTGTTCTAGATTTAAGCAGATTGCCTGACCATAAGTTATACTCTTGCTGTTGCACGGTTCACACTGTCTACATTCTGAAAATTTTTGGCTGAGTTTGATTTCAGGTAATTACTATGACTGCTTAGGTTCACCTTGAGGTTTGATTTAAAATTTCATCAAATGTACTTTTGCTTTCATTTTCTGTCATTTTAAGAAACTTCAGAGTTCAGATCCGTGTTTCATACTTTGTTAAATTTACTTTAAAGCAAACTACTCAACACTTGGCCAGTGTTTTGCAAGTGGATTTTGTTTCTCCTCCTTTTGATTGAAAGAATTTTAAAACATTTTTAAAAATTGAATTATTAGTGGAGAACAGAGGAGCCTGGCAGTCCATGATGTCGCAAGGATTCAGACACCACTCGTGACTGAACAACAGCAGAAGTTGATTTACAGTGAAAGAACTTTCTAAAACTAAATATCAATGTTCCTGTTCTCAGTGTTTATTTGAAAACTTCTGTTCATTAGAGACTCCTATTTCTACTTTATCCCTTTTAGTCTGTCTAGTGTTTTGGTATTTGCAGGGAAAAGCCTCCTGAAAGAGCATTTGCATCTATCTTAAATAAGTATTTCAATTCATACAGTTTTCAGTATAAAGTTCTGTCTGCTTTTTAAAGAATTCAGATGTTATTTTCACAAAGACTTCACTTATATTTACTTCTCTTAAAAATGGCTACTATCATTTTCCCAGAAAGGGTCAGAGCTTCTTTATTGATAATTTATTGAATTTCCTTTAAATCTTGAACAAGTTTTACCATAAAGTGCCAGTGGGAAAACAATACAGATTTTTGTCATAAAGACCTAATCAAGAATAGATAAGAGCACTGAAGTTTTAGGAATTACAAGTTGGAATCATGCCATTCAAATTAATCTCAGAAGTATGTCACTGTATAGATAAAAAAAGGGTATAAAGTTCTAATGGATTTTGTTTTCAG
Seq C2 exon
CATCCACAGAGGTGGGCTGCGATGCAGTCTGGGAGAAGGATCTCCATTCACGCATTTGCTACCAATTCAATCTGCTTTCCTCCCTGTCCTGGAGTGAGGCTCATTCTTCATGCCAGATGCAAGGAGCTGCTTTATTAAGTATTGCAGATGAGACTGAAGAAAATTTCGTAAGGA
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000032515:ENSBTAT00000046112:3
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0004014=fn2=WD(100=71.2)
A:
NA
C2:
PF0005916=Lectin_C=PU(29.6=54.2)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]