BtaINT0154766 @ bosTau6
Intron Retention
Gene
ENSBTAG00000012827 | TTLL11
Description
TTLL11 protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:A7E2Z5]
Coordinates
chr11:92852151-92867478:-
Coord C1 exon
chr11:92866903-92867478
Coord A exon
chr11:92852247-92866902
Coord C2 exon
chr11:92852151-92852246
Length
14656 bp
Sequences
Splice sites
5' ss Seq
CAGGTAACC
5' ss Score
8.66
3' ss Seq
TCTGAATTATGTTTATCCAGATT
3' ss Score
4.91
Exon sequences
Seq C1 exon
GTTCGAATGGTGAAAGATGGGGACCCCTCCTGGAAGCCCACTTTTATTGTGAAACCTGACAGTGGTTGTCAGGGTGACGGAATCTACCTCATCAAAGACCCCAGTGACATCCGCCTGTCAGGGACGCTCCAGAGCAGGCCGGCGGTGGTCCAGGAGTACATCTGCAAGCCCCTCCTCATCGACAAACTCAAGTTCGACATCCGTCTGTACGTCCTGCTAAAGTCTCTAGAGCCCTTAGAGATCTACATAGCCAAAGACGGACTCTCTCGGTTTTGTACGGAGCCGTACCAGGAGCCCAACCCCAAAAACCTGCACCACATCTTCATGCATTTGACCAACTACTCCCTGAACGTCCACAGTGGGAACTTCGTCCATTCGGACAGTACTAGCACGGGCAGCAAAAGGACTTTTTCTAGCATTCTCTATAGGTTGTCCTCCAAGGGTGTTGACATCAAAAAGATCTGGTCCGATATCATCTCCTTGGTGATCAAGACCGTCATTGCCCTGACTCCAGAACTCAAAGTGTTCTACCAGTCAGATATACCCGCGGGGAGGCCGGGCCCCACCTGCTTCCAG
Seq A exon
GTAACCAGCGCCAGTTCCCAGCCAGTTCTTGGCCTTGACCGGGCTCTCCCTGGTCTCCTGTGGGGTGAGGGATGGGGGCGGGGTGGTCAGAGGGGTGGAGGGATGGTTGCCCGAATGGGCTTTGGTGTGAAAGCAGGGTCCAACTTTCTGCTTTCTATTCGCTGGCTGTGTGACTTGGGGCAAGTTACTTCCATTTTCTCACCTGTAAAATGAGACTAAGAGTAAACCTCCCTTAAAGGATGCTTGTAAGAGTCAAATGAGCAGTATGGAAAGCCCCAGTGCCTCCCGTTCATTCTTTCTTCCTGTAGTTTTCACCAGCTGCTTAGCAGGGGCCTGGCACTGTTCGAGGTACTAGTGAGACAGGAAGTCAGGTCCCTGCTGACTGATGCAGAGAATCTGTGCTCTTGTGGGAGATGAATAAGTTAAAGAGCAATTTGTATAGGGACTTCCCTGGTGGTCCAGTGGTTAGGAATCCACACTTCCAGTGCACGGGGCCTGGGTTCACTACCCGGTGGGGGAACTAGGATCCAACATGCTGTGTAGAATGGCCAGAAAACGGAAAAAAAGCCATTAGTATGAAGTGTCACGAGTGCTGGAATAGAGGAAACACACCAGGAAACATACCAGGTGCTGTGAGATTGTGGGGCCATCTAACATTTTCTGAGTGGGAACAAGGGTGGTCTGGGAAGACTTCCCAGAAGTAGCAGCAGTTAAACTAGGACCTGGAGTAAGAGTTAGATGGAGCAGGCTAGACTGGAGAGGGCTGGGGAGACAAAGAATCCTGCGGGAGACATGCTTGCAGCCCCAGATGTGAGTCTGGATGGAGGGTGGGGTTTGAAGCAGAGACATGGAGGGAGATGAGGAAGTTGAGGTGGGAGAGGTCGGTGGGGTAAGTCATGGAAAGCTGAGGGCAATGGGGTCCATGGGAGGGTGCCCAACGGGCACAGATGCACTCAGGTTTGCATGTGACAAGGACCAAACTGGCCACAGGGTGAAGACCAGATTGAGGGGAGGCTAGGAGCAGGGTTGTGGGGAGAACTGGTGAGCTGAGTGCTTTCCTATGACCAAGAGAGGATGCCAGCTTGGGTTGTGAAGGGCTTGGTGGTGTTGGAAAGAACAGATGTGAGAACCATGGTGGTGGTGGTGGTATAGTCGCTCAGTCATGTCTGACTCTTGCAACCTCACAGACTGCAGTCCGCCAGGCTCCTCTGTCCGTGGGATTCTCCAGGCAAGAATGCTGGAGTGGGTTGCCCTTTCCTTCTCCAGGGGATCTTCCCAACCTAGGAATTGAACCTGGGTCTCCTGCATTGCAGGCAGATTCTTTACTGACTGAGCTTTGCAGGAAGCCCATGTGAGAACTATGAAAGGGGTCAAACAACCAGACTTGGTGATTGGCTGGGGCTGGGGGACAGTGGAGAGACCGTGGCGGGAAAGATGCAGGGAACCCAGACCAACTCCTGGCTGGCTTAGGTGCTTGGATGGATGAAGAGAAGCCGCCGGAAGGGGGCCAGGCTTGTGGGCAGGAGTCAGGAGTTGGACTTGAACATGCCTCTGAAGGGCCTGTGTGACATCCAAGTGGGGAGGTTAGGTGGACATTGGGCATCTGATCCTGGAGTACAGGAGCGGGAGGGCTGGGCGGGACAGAGATGGGGAGCATCAGTGTTCAGATGGTCATGGGGCCGTGAGATGCTGCAGGGTGAGCAGAGGCCAGAGAAGACCCCCTTGGGCACCGCCATTCAGTAAGGGACAGGGTGATGTGTGGAGCACTGGGTCAGCCAGTGGGCAGGGAGGAGATGGACACGGGGGTGGTGCATCCTTCCAGGTCATTTGGCCATGAAGGTGGTGGGGGGAGACCTGGAGTCTAGGTGCTTGGTGGGGACACAGTTTCCTGCAGATAAATTGGAGTAGGGAGCAGATGATACGAAACACCACCTCTGGGACCCCCGTGATCTAATCTTGAAGCAGTTAGTATATAAGAAAGAATACGTGGAACATGTGTGTAACCTATGAAGCAGAAGCACGAAACCATCATCTCCAGCCTACCTCCCAACCCAAGGTCCCCAATTATAGTGCTGCTCCCTGATCCCGTTCCTCACCCCGAGGTAACCATCGTCCCGAATGTTCTCGTTATCATTTCCTTGCTTAAAAAAAAACCTTTTATTATATGCGAATATATCCCTGAGGAATATATGGTTTTGCTTGTTTCCGAGCATCATAAAAACACTGCAATCACGCACATAGTCTTCTGCCACTCTCTTTTCGGCTCTACGTGGAGGTAGGTCGTTGGTTCGCTTTCATTTGCACGGTTGTACATCCCATTGTAAATACGCATGATTTGTTCATCGGTTCTTCTATCATTGAACGTTTGAGTTGTTTCTAGTCCTTTAAAGGCTGTGGCAGGAGAGACGCAGGTAGCGTGGAACAGGAAGGGGGAGGGGGAGGCAGCGGGGCGGCATCTCTGACGGAGAGGATGCTCGTTCGGCAGCAGGAGAGGAGGCTGGCCCCAGGATACAGCCCCAGATCCAGAGAGGCTACCCTAGTAGTGGGCACCAGTCAGCGGGCTTTCTGGGAAGGCCGGTGGAAGCCTTTGACGGGGCATTCAGGCAGTGGTCAGTTTGGGGGGTGGGGTTGGGGGTCGTGGTGGTGGAGGTAATTGTCATCCAAAATCTGTCCTTAGGCACTTGGACCCCAGGCAGGATGTCCAGCTCAGCCATCAGGCTTAGGGCGTTAGAAAGGGGAGGTGGGCACAACTTAGAGGCAGGACCAGAGAAAACAAATCCTGGCTTGAGCCACAGGAAGGTGAGGGCGAAGGAGAGAGTTGCAACGTGGAGGCATCCAGGGGTCATCCCAGGGGACTGCGTGGTCACATCTGTTCGACAGTGACAGCTATTCCGGGAGCGTCATGTGGGCCCTCGTGCATGGCCAAGCCGCAGAGCCCTGGCACAGCGAGGGTGCAGGGTGGAGGGCCAGGCCGTGGTTTTTCTGCCTGTCTTGCTGTGGACCAGTGGCATGGGGAGGCCATGGGCTGGAACCAGGGCCCCAGCTGCAGGGCAGACAGAGAGGGAGCCGCTGGTTTGGACAGAGCACAGCTGGCACATGAACCACAGGCCCGTAAGCGTTTTCCATTGCTCGACCACGCTGAGTGCTGCCAGGCCTGGGGTCGGGAGAGGAGCACAGGGCCGGAAGCAACCCTCCGGGAGGAGTTCATCCTCTTCCCGGCTGGGGGTCCCGTGGGCACGTTTCCTCACCACCCCGAGCCTCTGTTTCTTTCTCTGTGAATCACCTACACTCACCTCCTTACCTGCCATCTTGGGAGCAGTGTGAAGTAATGAGGGTGAAATCCTTTGATGTGGTATAAAGCACGTGGTGGTTTAGTTGCTCAGTCGTGTCCAACTCTTACAACCCCAGGGACTGTAGCCCATCAGGCTCCTCTGTCCATGGGATTCTCCAGGCAAGAATACTGGGGTGGATTGCCATTTCCTTCTCCAGGGGATCTTCCTGATCCAGGGATCGAACCCACATCTCCTGAACTGCATGAGGGTTTGTTACCGACTGAGCCACCAGGGAAGCCCACAAAGCATTAGATACTTGAAATCTGTTTTAAAGTACATTTCAGATTCACAGTGATTGAGAAAACAGTGTTTTGTTCTCCTTGGAGTCCTCTCTTGCTTTCTTTATCCTTATCACTTGTTGAAACACTTGTTAGTTTAGGTCTCAAACACCTGAACTAACTTGGAACCCAAAGATTTGGGGACAGCACATGGTTCTGACATGGACTTGCCGTGTGACGTTCTATAAGCCGCTTGACTTTTCTGTGCCTCCGTTTCCTCACCTACATCACAGGGTTGTCGTCCAACTCACATGAGATCAAGATGATAAAGGGCTTTGCAAACTATAATGTTTTGTGCATATATAATGCATTTTTTCTTTGTCATGGACGCCCCTTTTGCTTGTAGCCAGGCCTGGCCCAGACTGCAGCATTCCAGAACATACACTCTAAGCCAACAAAATTACATTTATCCTAAACATGTGACTGTGACCCCTTTCCAATCACAGCCACAATAACTACTTGGAAAACTGTGATGGCCCAGAGCAGGGGCTGGCATGGCTGGGCTGTGGGCAGGTTTCCTGTAATCTGTTGCCTAGGAACGTGGCTGCCCTGTCATTCTGGTCTGTCCCCCTGTCATTGCCCAGACAGCCCTCAGCAACATTTCCCCCTGTCAGTCTTCTGGAGGGCAGCTCTGTGACCCCGGCTCAGAGAGTCAGGCCCGTCTGGGTGTAGACGATTCATGTGGCAGAAATGCACACGCAGCGGAGAGCTTTCCAGCAGAGTTCAGCTCTCGTGAACTTTTCTATCTCAGTTCTGCAGCTGGGTTTCTGTCGTCGTCTCGCTCTGGGTCCACTTCTCTCCTTGGCTGTGATCCTTTCCCTTCAGTGTCTGGAAGAGGCACCTTCCGTGAGTGCTAAGGTGCTTCTTCTTTCCCTTCTTTGCTCTTCTGATCTCCCCCACCATCAGCCCCAAACACCCCACAGGAAGGAGGGGAAGGAACAGCCCAGCGCTCACACATGGGCTTGAGTTTAGTTCTCAGACGCCCTGGATTTGAGCTAACCCCAGCTCCTGCTTCCAGCAGCTCCAGCTGGAGAGCTTGGCAAGCTAACCTTTCTCTGACTCAGTTTCCTTATCTGCAAATAGAATATTGGTCCCTGCCTCACAGAGTTGTTGTGAGACTGAGTGAGAGAAAACTGTGTTGAAGAGTACCCAGCAGGCAATCACTTAATAAACAAGGTCATATCGTTTGCTATCGGTCATGACAGTTGTTCTCAAACTAGTCTACGAAGAAGTGCCTTGAACTTAGGGGGAAACCAGGAAGCAAGTCACATTTCCAACTTAATGGAACACTGGTGTTCCAAGGAGCACAGTTTGAGAAACAGGTCCTGACCCCTGCTGCCTCCCAGCCTGGCCCCAGCCTCGCTTCCCCGTTCCTCCCAGATCCATGCGAGTCTGCCAAACACAGCTGACTCCTGTCTCTTGGACATCCTCCATGTTTCCCCACTTCTGCCCTTTTGTTCTCTCCTGGCTTGGCCCCTTCTGCCACACTCTGTCTTCTGCCACGCTCTCTCATCTTCTCCCTCTCTTGTAAAATCTAGTGCTGGCAAAGTACAGCTTGAATCCCACCTTCTCCATAAAGCCTTCCTCGACCACTTTTGACATGTAAACTTTTTTTTTTTTCCTTCTTTAAGACACATATGTTGGCCGCCCACTGACACAAGCCCTGAGCTAGCTGTGGGCGTGTGGTATGGGCGAGGTTGCAGTCCTGCTCCTAAGAGGTGCACGGTGTGCTGGGGAGCACTGCCACGTGGGAGTCGTGAGCACCATGGAGGGACATGTGCAGGATTATGGGAGAACACAGACAAGGCAGCTTGTCTGCACCCCCTGCGTTGGAAGTGCGGAGTCTTAACCACCGGACCACCAGGGAGATCCCAGTGTGACCACTTCTAACCAACACCGCTGCCTCCATCCCAGTCCAGACAGCCGTCATCTTGTACTTGTATCACTGCAATTGCCTCCTAATTGATGTTCGTTTTCCCACCCTTGCTGCTTGTAGCCTATTTTTCTCACTGTAGCTAAAGTGATTCTTTTAAAACATGTCAGATTAAATTACTTCCCCGTGTAAAGTCTCCAATGGCTTTCTCATTGCACTTAAAATCCTGGCTCCTTACCATGGCTTGCAAGATGCTACATGATCTATCCCTTGCCATTCTGTCTGACCTCATCTCCTGTCTCCCTCCCTCTCACTCCTTGCTGTTCATCAGAAGTGGCCTGTGTTCTTGCCGTTCCTTCTGCTTGGGACGCTCTTCTTCAGCTCTTCAAATGACTTATTTGCTCACTTCACTCAGTCCCTGTTCATACATCACCTCCTGAGTCTTTGGCTTCTGGTCGTGATGGAGTAACAAAGACTGGACTTAACCTTCTTTTGAAAACAACTAGAATACCAGACAAAATACACGAAAGAAGTGTTTTCAGATTTTGTACCACAGACAGCTCGGCATCATAATCCCAAAGGAAAGTGGGGAACAAAAGCCGAGATGTGTCTATGGTTGCCTCACCTTTCTGTCTGGGGGCACTCTCTAAGACACGGGCGGGGGTGACGGTGCACCTAAACAGAGTCCTGTGACCTCAGTGAGTTGAGGAGATGGAGATAAGCATTTTAGTGATGCCAAGGTGGCTGGAATTCTGTGGGCAGAATTCTTTAAAGGAGGGACCCAAGCAGGAAAAGAGCTACAGGAACCTGCATGGGAATCCCTGTACACCTTTGCTGAGTGCTGGGCTATTCATATGTAGAGGGTTAATCCATAGAGTTGGGCAAGAATGACCAGGGAACTGAGAAGATGAACCAGAGCTCACACAGAGCAGGGAGATGTCCAAGCTCCAAAGAGTCAGTGTGGAGAGTGCTTGGTGGTTACTGGACACATTCAAGGGAGACTGCAGAGAAGTTATGTCCTAATGGATTGAATCTTCCCTGGGATGAAAGTTACTCTAGACTCAACCTGCTGCTGCTGCTGCTGCTAAGTCACTTCAGTCGTGTCCGACTCTGTGCGACCCCATAGACAGCAGCCTTCCAGGTTCCTAGTAAAGCTTAAATAATAGGCCTGGAAGGTATCAGCATAATCTTTAAATAACTGAGTACCTAAAAATTTCAGTTCAGTTCAGTCGCTCAGTTGTGTCAGACTCTTTGTGACCCCCTGGACTGCAGCATGCCAGGCTTCCCTGTCCATCACCAGCTCCCAGAGCTTAGTCAGCTTAGTCATGTTCATTGAGTTGGTGATGCCATCCAACCATCTCATCCTCTGTTGTCTCCTTCTCCTCCTGCCTTCGATCTTTCCCAGCATCAGGGTCTTTTCAAATGAGTCAATTCTTCACATCAGGTGGCCAAAGTATTAGAGTTTCAGCTTCAGCATCAGTCCTTCCAATGAATATTCAGGACTGATTTCCTTTAGGTTTGACTGGTTTGATTCCTTGCAGTCCAAGGAATTCTTAAGAGTCTTCTCCAACACTGCAGTTCAAAAGCATCAGTTCTTTGGTACTCAGCTTTCTTTATGGTCCAGTTCTCACATCCATACATGACTACTGGAAAAACCATCACTTTGACTAGATGGACCTTTGTCGGCAAAGTAATGTCTCTGCTTTTGAATATGCTGCCTAGGTTGGTCATAGCTTTTCTTCCAAGGAGCAAGCATCTTTTAATTTCATGGCTGCAGTCACCATCTGCAGTGATTTTGGAGCCCAAGAAAATAAAGTCTGTCACTGTTTCAACTGTTTCTCCATCTATTTGCCATGAAGTGATGGGACCAGATGCCAGGATCTTAGTTTTGTGAATGTTGAGTTTTAAGCCAACTTTTTCACTTTCCTCTTTCACTTTCATCAAGAGGCTCTTTAGTTCTTCTTCGCTTTCTGCCATAAGAGTGGTGTCATCTGCATATCTGAGATGTTATTGATATTTCTCCCAGCAATCTTGATTCCAGCTTGTGCTTCATCCAGCCTGGCATTTCACACGATGTACTCTGCATATAAGTTAAATAAGCAGGGTGACGATATACAGCCTTGACATATTCCTTTCCCAATTTGGAACCAGCCTGTTGGTCCATGTCTGGTTCCCGCTGTTGCTTCTTGACCTGCATACAGGTTTCTCAGGAGGCGGGTAAGGTGGTCTGGCCTAAAAACTTCACACTTTTTAAAAAGAAGACAAATCCAGATACTGAGCATTAAATGTCCAGTATCCAATAAAAAGCCACTAGATATTCCCCAAGGCAAGAAAAGGTAACCTATACCTAGGGGGAAAATCAATAGGAACAGTCCCATAAATATTAGAAATAATGAAACTGATAGAAAAAGGATGTTAAAACAGCTACTACAACTGTGTACAAAAGTTTAAAGGAAAATAGTTTACTGTAGAGAGAAATGAAGCTATGAAAAAGAACCAAATGGAACTTCTAGGAACCAAATGGAAGAAAACGCAATATCTATATTGAAAATTTCACTGGATTAGGATTAACAGCAAATTAGATACTGTAGAAGAAATGATCAACAAACTTGAAGACATAGCAATAGAATTTATTCAAAATGAAACACAGAGAGGAAAGTGACAGGAAAAATAAGTGAACAGACCCTCAGTTACCTATGGTACAATATCAGATGGTCTAACATCTGTGTAATTGGAGTTTCCTGAGCAGAGGAGACAAGGAAGATACAGAAAAATATTTGAAGAAATGGCCACACATACAATAATGTGTACACACACACACCAAGGCTTATCAAAGTCAGATCAGTGACAATAAGAAAATCTTAAAAGCAGCTAGAGAGAAAAGACACATTATGTTCAGAGGAGTGAAGGATAATTGAAAACCTTTCATCAGAAACAGTGCAAACCAGAAGACAGCAGGATGACAAATCTCACAAATCCCAGGCCTTTCCTGACCACCAAGCCCTTCCCTCCATCCACTGCACACACTCTGTGTTCTTACCTGGTCATAGATATTTACTTGCTTGTGGTCTCTCTTCTAGAATGTAAGCTCCAAGAGGGCGGGAGTTAAAATGAACCTTGTCTTCTTCACTGCTTTATCCCCAGTGGCTGGAATACTACGTAGTGCTGCTCAATAAATATTTGATAAATAAAGTTGTCTTCCAAGTAGAAGACAGCAGAGAGTAGGAAAGCATTCTAGAACGACTAATGTTGTTTAGTTGCCAAGTCACGTCCAGCTTTTTCACAATCCTGTGAACTGTACCTGCCAAGCTCCTTTGTCAAGGGATTTCCCAGGCAAGAATACTGGAGTGGGTTACCATTTCCTTCCCCAGGGCATCTTCCCGACCCAGGGATTGAACTCGGGTCTCCTGCGTTGGCAGACAGATTCTTCACCACTTGGGAAGCCCAGAATTACTAACAGTTCAGCACAATTAGAGCCCAATACATGCAGCGTTGAGTTGGAGGAAATAAAGCTAGAGTTTGATAGAGATGCTGGTCATAGAGGAACTTATTGGACATGCTCTGGAACTTGGGCTTCCTCCTGTAAGCCAGGATTTTAGGTGGAGGGGGTCCTAACATTTTATTTGCATTTTAGAAAAATTACTCTGGTAGCCCTTTGTGCGAGGTGATTTTGAGAGCAGGGAAATGAATGGGGGAAGGTATTAAAGTAGTCCAGGTGAAAGGTGGTGTGGGTTTGATCTAGACTAAGAACAGGGAGATTGGGCCAGGTCTAGAAAGCTGTTTTGGAGGTAGAATGTACAGAGCCTGTGAACAGCTGGATGTGAAGGAAGGAGAGATTTCTGGCTGACTGCTGCTGGCTCAAAGTCCCTCACAGGCTACAGTTAACATATTGTCTAGGACTGCAGTCATCTTGAGGCTACAGGGGAAAGATCCCCTCCCCAGCTCACTCACATGGCTATTGGCAGGCCTCACGTCCCCCTTGCTATCGGCTGGGACATCAGTTCCAGAGGCCATCTCAGCCTCTCCATCCAGCGGCTCACAACGTGGAAGCTGGCTTCCCTTAGTGTTGAGGGAACAAGAGAGTAAGAGAATGCATCTCAAGATGCAAGCCACAGTCTTTTTATATAACCTAATATTTGAAATGCTAAGCTAAGTCACTTCAGTCGTGTCTGACTCTGTACGACCCCATAGATGGCAGCCCACCAGGCTCCCCGTCCCTGGTATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGGGAAGTCGCTCAGTCATGTCCGACTCTTAGCGACCCCATGGACTGCAGCCTACCAGGCTCCTCCACCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTCCCTTCTCCATATTTGAAATGATATCCCATAATTTCTGCCCTGTTTTGTTTGTTAGAAAAACATTATTAGGTGCAGCCCACTCTCAGGGAAACGGGCTTACAAAAGGGTGTGAATACAGGAGGTGGTATCATTGGGACTATCTTAGTCTGCTGATCACAGATAGTGAGTTTGGTTATGTTGAATGTGAGGGGTGTGGGGTCTCCAAGTTGGGAATATTCTGGATGCAGATGGATGTGTAGTTCTGGGGCTCAGGAGGTAATTCCCTCATTGGAATGTAGGTTGGAGGCTTTACCTGAGTTTACAATGAATGGCTCAGGGCCCTTTTCTCTCCAGCTTGCTTTGGAAGCTTCCGGAAGTGAGGGATGAAGGACAAGATATCTTTGAGTCCCCAGGGCACCCTGTAAGTAGCAACACATCATTGCTAATTGAATGACTTGGAGGGTGGAGAGTATCACATAATTGAAAAGTTTTTTCTCTCTTTCCATTTGACATTTCCTGCTCTGCCACCAAACTAGAGGGAGGTTTTCCTGTTTCTAAGCTGCAAGTTTCTAATGTGCAAAGTGGATGTTAGATTAGATTAGTAGTGTTGTTGTTCAGTCTGACTCTGCAATTCCATGGACTGTAGCCCACCAGGCTCCTCTGTCCATAGAATTCGCCAGGCAAGAATACTGGAGTGGGGTGCCATTTCCTTCTCCAGGAGATCTTCCCAACCCAGGGATTGAACTCAGGTCTCTTGTATTTCAGGCAGATTCTTTACCACTAAGCCACAAGGGAAGCCAGGACTAGTAGTATATATATGTATATATACTTGGATCACAATGAACTGTGGAAAATTCTGAAAGACATGGGAATACCAGACCACCTGACCTGCCTCTTGAGAAATTTGTATGCAGGTCAGGAAGCAACAGTTAGAACTGGACATGGAACAACAGACTGGTTCCAAATAGGAAAAGGAGTACGTCAAGGCTGTATACTGTCATCCTGCTTATTTAACTTCTATGCAGAGTACATCATGAGAAACGCTGGGCTGGAAGAAGCACAAGCTGGAATCAAGATTGCCAGGAGAAATATCAATCACCTCAGATATGCAGATGACACCACCCTTATGGCAGAAAGTGAAGAGGAACTAAACAGCCTTTTGATGAAGGTGAAAGAGGAGAGTGAAAAACTTGGCTTAAAGCTCAACATTCAGAAAACGAAGATCAAGGCATCTGGTCCCATCACTTCATGACAGATAGATGGGGAAACAGTGGAAACAGTGTCAGACTTTATTTTTTGGGGCTCCAAAATCACTGCAGATGGTGACAGCAGCCATGAAATTAAAAGACGCTTACTCCTTGGAAGAAAAGTTATGACCAACCTAGATAGCGTATTGAAAAGCAGAGACATTACTTTGCCAACAAAGGTCCGTCTAGTCAAGGCTATAGTTTTTCCAGTGGTCATGTATGGATGTGAGAGTTGGACTGTGAAGAAAGCTGAGTGTTGAAGAATTGATGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGAAGATCCAACCAGTCCATTCTGAAGGAGATCAGCCCTGGGATTTCTTTGGAAGGAATGATGCTAAAGCTGAAACTCCAGTACTTTGGTCACCTCACGCGAAGAGTTGACTCATTGGAAAAGACTCTGATGCTGGGAGGGATTGGGGGCAGGAGGAGAAGGGGATGACAGAGGATGAGATGGCTGGATGGCATCACTGACTCGATGGACATGAGTTTGAGTGAACTCCGGGAGTTGGTGATGGACAGGGAGGCCTGGCGTGCTGCGATTCATGGGGTCGCAAAGAGTCGGACACGACGGAGCGACTGAACTGAACTGAACTGAATCTAGTATAGATAGATGTGTAGATATAAATATATACTTTTCCCATGGGAACCCCAGGATGTAAAAAAGATAAAAGTAGATCTGATCTGGTCTCCCCAGTGCTTCCCCCTCAAAATAATCTCATATTGAAAAGCACTGAACCAAATAAATTCCTGATTTTCTGCCAGATCTGACATTCTGGGATCTTATGAAAAGACCAACTTTTGGCTCCTCCAAGTTTTGTGATTCTGTTTCTTGAGATCCACTGCTGCTGCATTTTTCATTAAACTTTGGGGGAAAATTCATCTTTCCTTGAACTCGTGAAGAACTATAAAGATGACTTTCATTAAATACTATGTGTCAAGTACCATGCAAAACATTTTACATCCCATTATCTTTACTTCCTCCTATCTCCCCAACTCGAGTGTAAGCTCCATGAGGGTAAGGACTTTGTCTAGTCCACTCCTGTATTTCCAGAAGCTGGAAGAGCCTCTAGGGCACAGGAGGCATTCAGTACTTAATGAATGAATGGACTAAGGTAGGCACTATTCTTATGCCCATTTTACAGATGAGGAAACTGGGGCTTGGAGCTGCTAAGTCACTTGCTGGTAGTTACACAAGTTGAAGGCAGAACTAAGATTTGAAATGAGTTCTTCTGGACTCCAAAGCTGCTAATGTCATTTCTTGTTGATGCGATCAGTAGGAAACCGGAAAGGCAGCCAGCGTATATTGAGTGCTTTCTTTAAGATGGGCATAACTCTAGGGACATTTTTGCTTCCATTGTCAACTACCCTGCAAGGTAGCTGTTGTTATGCCCATTTTTTTCCAGATGAGTTATGTGAGGCTCACAGAGGCCTAGAGTTGTGTAGCAAATATGAGAGACTGAACTGGATTGAAGCCCAAGTCTGGCTCCAAAGCACTCCTACACAAGACTCAACACAGTCAACTCCATGCACCAAAGTTTAGGCCCTGGAAAGTTCTGTGCTGCTGCTGGGTGCGGGTCTGTACAGTTGGCGAAGCTTTGCTACTCCTCTTCTGCAGCTTTCCCATAGCTGTGGATTCATGAAATCCCTATGCACTGAGCTGAGATGAATCCACCAGGCCGAGAAAGGACAAGTCCAAGCTTCTAAGATGTAGCAAAAAGTAAGCGTCCGTGACTCAGGATGATAAACGTTGACACTGCCTCCCATTGTTCTCTGTAGGCTCATCAACATCAGGTCTCAGACCAGGTCTGAAGTTAGACTGATGATGTCACCAGAGTCTCTTACAGGCCTCATTACTCATATCCACTTGTCATATATTATTAAGCAGATCTATAATACATGTAACATTTTCTACTGAATTTCCATTCCTTTCTTCTTATGATCAGGAAAAGAAAAATAGAGTGAAGATGACTTTTCCCAACTTTTCATCCTTATTGTCTTTTCTTGAAGAATAGCCTTATCTTGAATTACACACCCTGCCCCCCACCCCCAAATGGTCATTCCGGCTCTGAGTTCATTAATAAGGATGAAGCTACACTTTAATAATTATCATTTAACTAATGCATATTCTAGATAGACAAGTAAATGGATTTCCCCTCATATTTTCTTCTTGAGTCCACAGAGGAGGCGATGCAGCTGTGTCTTTGTTCTCTCCCCTCCTTTATTCTCCATGTTACTATTTGAAGCTCATATTAGAAGTTTTCTTCTACCTTATCACCTCCTAGAGAGATAATGACAGTCCTCCCGAGAATCCTGCATCCTCATAGTCCACGTCTGAATCCAATTAGAAACTGTGATCTCAAGGGTGAGGAGATATTATCTAGATAAAGGGCTATTTCAGGCCTAGGGAATGAAATGCACAGGGTGACTTATCCCAAGCAGGGGACTCCTGAGGAATTGAAACAGTCCACAAGACAAAGCCACACCTGAGGCAGAATGCCGGGTTCAAGAGCAGGAGGTGGGCCGGTCGGCAAGGGTGCTAAAGCTGGCCATGGGTGCAGGCTGGCTCCAGGGGCTTATGGGCTGTGCTGTCACAGAGGGCCCCACACTCCGAAGGGTTCCATGCTTGGTTTAATGCTCTTGTTTCAGCATCATGAAATTTGTTAATACTTTTTGAACACTGCATTTCTATCTTGCACCAGGTCCCACAAACTGCATAGCAGTTCTGCAGTTCTGAAATCCAGCTCTGTCCTTTATGAGAGGAGCAGTCTCAGGGAAACCCACTGGCCTTTCCAAGACTCACTTTCTGCTTCTGTGAAATGCAGAGCACAATCCCTACTTCAAATATGCTGTCGGGAGAATGAATCAAGATTGTGAATAATTAGTGCATTGTATCATAATTGGTGCCTAGTGGGCACCTAATAAATATTCCCTTCTTCTTGGGTAGGAGGGTCCATCAGAATTATCCAGGGGATTTGCTACTGAAAATACACTGGCTGCGTTCCACTCTGAAAGACTCTGACTCACAGGTGTGGGTTAGGGGTGAGCAGTGGTTTTGAAAGGGGTCCCTAAGTGATTCTGATATATACCCGAGGTTAAGAAACATAGTCTCGGGTTTTTTAGAGATCCAGCTAAGAGGCAACTTAAAAGAGGAGAACAGAAGGAGAGGGAGAAACTGATGGACAATTACTGATCCTTAACATAATAAAAAACCTGTTAAAGAAGAGCGAGGTCATCATCTTACAGCCCTTCAGACAACACCGATGGTGCTGAAATGAACCATGGGACCTCATCCCATTACCAAGACCCCTATAAAATTTTCTGCTGTCCATTTGGCCTGACAAGTCCATCCGGAGGAAGAGGGGCTATGGATGAGAGAAGCCAGGGTCAAGGCCCAGGTTGGGGGCGGAGGTGGAATTTAGTTTCACCTTAATACCCCTAATATAGTACCTAATTCCTGAAAAGACACTGCAACTAATTCTGAATTATGTTTATCCAG
Seq C2 exon
ATTTTAGGCTTTGACATTCTTCTCATGAAAAATCTGAAGCCTATACTACTTGAAGTAAATGCAAATCCCAGCATGAGAATCGAACACGAGCAAGAA
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000012827:ENSBTAT00000017043:2
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion (1st CDS intron)
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.047
Domain overlap (PFAM):
C1:
PF0313310=TTL=PU(75.9=99.5)
A:
NA
C2:
PF0313310=TTL=FE(12.4=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Human
(hg38)
No conservation detected
Chicken
(galGal4)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development