RnoINT0005628 @ rn6
Intron Retention
Gene
ENSRNOG00000019339 | AABR07051518.1
Description
tubulin tyrosine ligase like11 [Source:NCBI gene;Acc:689746]
Coordinates
chr3:15226686-15239708:-
Coord C1 exon
chr3:15239133-15239708
Coord A exon
chr3:15226782-15239132
Coord C2 exon
chr3:15226686-15226781
Length
12351 bp
Sequences
Splice sites
5' ss Seq
CAGGTAACC
5' ss Score
8.66
3' ss Seq
GTGTTGTCTGTTCTGCCCAGATT
3' ss Score
7.52
Exon sequences
Seq C1 exon
GTCCAAACGGTGAAAGACAATGACCCCACCTGGAGGCCCACTTTTATTGTGAAACCGGACAGTGGTTGTCAGGGCGACGGAATCTACCTCATTAAAGATCCCTGTGACTGCCGCCTGACTGGGACCCTGCATAACAGGCCGGCAGTAGTCCAGGAGTACATCCGCAAGCCTCTCCTTATCGACAAACTCAAGTTCGACATCCGTCTGTATGTCCTGTTGAAGTCCTTGGACCCCTTAGAGATCTATATAGCCAAAGATGGACTCTCTAGGTTTTGTACAGAGCCATATCAAGAACCCAACCCCCAGAACCTGCACCATGTCTTCATGCACTTGACCAACTACTCCCTGAACATCCACAGCGGCAAGTTCGTCCACTCAGACAGCGCCAGCACAGGCAGCAAGAGGACTTTCTCTAGCATTCTCTGTAGACTGTCTTCCAAAGGTGTGGACATCAAGAAGGTCTGGTCTGATATCATCTCCTTAGTTATTAAGACTGTCATCGCCCTGACCCCAGAGCTCAAAGTTTTCTACCAGTCAGACATCCCAACAGGGAGGCCGGGGCCCACCTGCTTCCAG
Seq A exon
GTAACCATGGCAGCCGCCACCCTGAGTTTTAGCCTTGAGTGGGCTGAGGAAAGGCTCCTTGGCTATGGGATGAAGGATGGGTAGGACTGCATCGTCAGGTGGGGATACACAGGTGGTGGCCAGTCTGGGCCACCTTTCCCAGTCCAACTTTCAACTTTGACCCTAGGTGACTTGGGGCAGGCTACTTTCCTTCATTTAACTGTGAGTCTGTAGGCTTCTTGTGAGAGCACATATGTCACACATGCATTCTTTGTTCAGTGGACAGTTGTTACTGCCTACTCAGGAGGGGGTCAGGCATTGTTGTAGAGTCCTGCTGCCCAGTGCCAAGAATCCAGGGTGTGAGAAAGTCATTAAGAAGGCATTGACATGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGGAAGTGCAAGGCCCTGGGTTCGGTCCCCAGCTCCAAAAAAAAAGAAGAAAGAAAAAAAAAGACAAAGTAATTAAGAAGGCATTGACACAGAGGGTTACATGTGGTGGAATCAAGTAAGAAATGGACCAGGTGCTATGGGGTTATGGACCCATCCACCATTCCTGGCTCAATCCAGGAAGTCTTCTTGAAAGACATGACGGTTCTACTGAAAGCCGGGGAGAGCGATGGAGCAGGAAAGAATGACTAGGGATCGTCACAGACTGTTCTAGGTGAAGACATGCTGCTTTGGAGGTAAGAGGGAAACCCGGTATGTTTGAGATAACCAAAGAAGTTCAGTGTGGCTAAGGCATGCTTCCAAGCATAGAGGAAGAATGTGAGAAAAGATGAGGTGGGGGCGAGCAGGTTAAGCCCAAGTTGTGGAGAGCCCTGGGGGCAGTGGCAGCCATCATCAGAGGATTATAAATGGGACAGATGGCACCCAGCTCAAAAGCACAGAGTTCCATGATAGCGAGTTATGGCTTAAGCCAAGGCTGGCTGCACGGAAATTGCTAATGCATGTGCTTGGTATAAGCAATGGAAGACGCTGGCTTTGAGTAGGAAGGTCTTGATAGACGAGAAGAGCAAAGGTAAAGTGGAATCCCATCTGAGGATTCTGATGGCCCGGCGACTGCGGGGGCTCTGGGGAAAGAGAAAAGAAAGGTAGCAGACACAGGAGGAGTTCCTGGGTGAACATGCACTTGGCGCCTTGAAAAGATGGACAGAGGCTACTTGTGGAGGAAGATGGGGGTATCAGGGAAGGGCCAGAATCTGGAGGCAAATGCCTGTATGGCAGTCGAAAGGAGAGGTTAGATTGCAAGTGGGTATTTGGACTGGCATTTGGAAAAGACAGGAGTGGGTTGGAGAAAGAACTGGGAACTGTCCACTGCAGTGACTAAAGGCATGAGGGTGGTGTGGGGAGGACCCTGTGATGCCCCCACATTAATAGAAGAATGGAAAGAGGCAGGGGAACCAACCAAAGGCGACAGAAAATGGTCAAGGGGGATGGTGTTCAAAAATGGCAGGAGAGGGGTGCTCAGAGAATACCTGGGCATGGCTTAGCCCCAACCGTTGCCTGCACTGTTCCTGACATTTACGCTTTCATGACTGTCCCGGAGACTCGGGCAAGAACTGTCTTGGGCATCCAGCCAGTTTGTGAGAGGGAAGGAAATGGTGTAAAGGAGCTTTTAAGCACATTTTAAAAACCTAGCTCTCAGGGGTGAGACAGGGGCATGGAGACCAGGCACTCACTGGGCACACCCTTCCTGCCACCAGACCTGTCAGACCAGGCCAGAGAAAATAAAATGAAGCTCTGGGATTCTCTCCTCCTAATCTCTGCTATTGTTGCATAGCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATAAAACAACACAACACACTTGTAAGGATCACACCTGACCCAGTGCCCAGCTCCAGTGTGTGTTCTTCCCTAGTCTCTTCCCCAGCCCGTGCTGTTCTGAATGTTATGTTCAGTTTTCAGAACTACACATGGTCATGCATGTATGTCCCCCCAGACAGGACACCACCGTATCTGACTCGTTTCAAAGCGACAAAGCAGTCCCCGTGCAAAATCCTGAAGTGCCTGCTCCTTGACAGGCAATGGTTCAAACGTCTGTCCCATGGCTGGGGCTGGTGGCGTGGCTTTGCTTGCACTGGTGCACAGCACATAAACACGTACAGTTCATCATTTTCTGTTGAGGGAGACCTGGGTATTTCCTGCCTGGACTAGGAGGGGCAAAGGCAGCAAGGGCCAAGAGTGAAGAGAGGGATCAGAGCGATGGCTCTCACAGTTGGATACCTACTGACTAGCCCACAAGAAACTGGGTAGCTCCAGATCCAGAGACTCTGGGACTGGGTCCCCATCAGCAGGGTCATCGGGTGAAAGCCCCTGGACAGGGACGGGGACAATGGGAGAAGTAGTGATTGCCTGTAGAGCCCCATCCATGGTCCTATGCCAGCCCCACCCTCCGTGCCTTCAGTTCTTAAGCAGGTATGTACAGTAGCCATGGGGAGATGCTTAGAAAGAGCTGCTGAGGAAGACTTCCAGACAGAGCCAGAACAAAGACGCCCTGACCCAGGCCACCACAAAGTGAGGGCAGAGGAGCCACTTGTAGTAACGGTCACACCCTAGGTTCATCCCTGAGGACAAGTATGGCCATGCCTGTTTGGCAGTGACAGCTATTCTAGGAGCATCAAATGGGGCCAGGCAAGCACAGCAAACTGCAGAGGCCCAGCAAGGAGGACCGAGAGGTCATTATGTGTGTGTCCTCAGTAGACAGGTCGCAACAGCCATCAGGATTGGGGCAGGGCCAGCTGTAGGGCACTGAAGGTCTGGGTCAGGAGCCACTGCTTTGGTCAGGCCTGGGCAAATGGGCAAATGGGCCCAGAGCCTCACGACCGTTTGCCACTGCTTGATCACACACAGTAAATGCTTCCAAGGTGAGGAGACAGGCTGGGAATGAAGCCCTTTCTGGCTTGGTGAGTACTGGAGTCTTTCTCACCACCCAGTGCCTCTTAGGTTCCCTGTGTACACTCACACTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGCACGCGTGCTGGAAAGCGATGTGGGTGAAGAGGCTTTAAGAAGGTGTCAAGTGGTATCTGCTTAGCATTTCTTGCTCTGAGTGTCTCAGACACATGGTGAGGGAGAGGATTTGGTATCCTACTCGAAGCTGAGTCCACTCCTGCTTGCTCTGTCTGAATCACCTTTCAGGATGCTGTTAGCTGGGCTCCAGCCATCTGAGCAGATCTTGAGCAGGTTTCCATGGTTCTGATGTCCATTTGCCATGTGACCCGTCCTAAGTCACTTAACTCTGCAGGAGTTCAGCTTCCTCCCCTGCCTCATGGGGTCGGCGTCCAACCTCCGAGAGACAGGGATCACGTAGGAAACACTTTGCAAACCGCTGAGACTCTGCACAAGTGCAGGAAGTTAGTTTCTTACCTGGGTAGGCCTTTCTTGTTTGTGGCAAGGCCTGACCAGATGGCAGCATTACCGGAGCATAAACCCTAGCCAACCAGATTCCACTCATCTGGGGCATGTGACTGTGACCCTGTTCCAGCCATGACCGCAGTAATGACTTGGAAAACATGGTGGCCAGGCGACAGCTGGCATGGCTCTGTCGTGGTCAGATTTCCTGTAATCTGCTGCTGAGGAACACAGCTGCCCTGTCATTCTAGCCTCTCCCTTGTCATTGCTCAGGCAGCCCCAGCCACAGAGCCTCACATCTGCCATCTTGAGGGCAACAGTGTGATCCAGCTTAAATATCACGGTCAGCCTGGGTGTAGGCGATCATGTGGCAGGAACACACAGAGGGAACAGGCTCTGTGGCTTGGACTGTATATTTGTCGTGTTCCTTATGTCTAATTCTGGCCTCAGCCATGACCTTCCTGTTGGGTGTCGAAAGATTCAGCTTTCCTAAGACCTACCTAACCCTCCTCTTCCTCTGTCCTCTGCCCAGACAGAAGTGGAGAATCAGTGTCTGTGTTGGTAGGGAGGGGTTGTCAAGGGCTGGAGCTTCCTTCTCAGACGGACTGGGTTTGAGCTTGTCCCAGCTCCTGCTTACAGCAGCTGTCGCTGGTGAGCTTAGCAAGTCAACCTTTCCTAGTCCGGATTTCTGTGGATACAAGGAGGTAGCTTGCCTGTAGCTATATCCCAGAGTTGTCCCGGGCTCCAGTAAGAGGGAGCTGCGTGGACCAGTCACCAGCACACAGCAGTCACTTAATAAGTGAGAGGATGGGTGTTTATTACTATGGCAACAGCTCTCACACCTACCCACGAGAAAGGACCTTGAAGTTATGGTACATCAGCAACTATTCTCATTTTGATGTTAACTAGGACATCGGTGATACAAGTTTGGAGCCAAGTCTGGAAACCTGGTGTTTTAGCCACATCTCAACCTAGCTCCCTAGCTCCCCTGTGCCTCAACCTTGGTTCTCCCATACCAGATCTGCTTCCTCTCCTGTGGTTGTCACCAGTGCCTCCCTGGTCGTGCCGTTGGTTTTCCTCTTTCTCTGCCAGGCTGGTCTGATCTCTCCTATTCATTGTTTCAATATTCAGTACCTTCCAAAGTACAACTCAAAGACCTTCTTTCTCTGTAAAACCTTCCTTGACCACTCTGACAGCTACATTATTTTCCTCCTTTGCAATCTAGCACATACCCAGGGTACCCACCGAGATGAGGCCTGAGATAGGTATGGGGCATGTGGCTAAGAACAAAGGGAGGCCAGGGCCTCTAAGGGATGCTCCGTTTAGTGTGAAAGACTCACAGAGATAATCCCTGCTCCTTATACACCATGCTATCCAAGGGCACACATGAGATGAGAGGGAAGAGTTAACTGCCCAAGCAAAGCCTTCCAGAGGAGGGGATGCCCAAGTGAGTTCAAGGCATAATGAAGAGGTTTTCCCAGCAGACACCAAAGGGTCCCACATTTTCATGTTTCCCTGCTACCTTCCTGGTTGCTCTTCCCCCAGCCTCTTCCTCTGATCCTGTATTTATTGGAGATATATTGGAGATATATTGGAGATCCCTGGAGATCGATTCTTAGAAATTTGTCATTGTACACCTACCAGCTCTTCCTAAGTGATCTCATCCTGCCCCATGGCTTCAGGGATCAGCTGCGTGCTGTTGGACTCACATTGCTAATCTTGAGCTCTGCTGGAGCTCCAGGCTGACATATACCATTGATCACTTGCTCTTCTATTGGGATAGCTGGTGGGCACCAAACCCCAGAGGCAATAGCAAATCTGCGCCTTCCCTCCTAGAGCCTGCCATCCACAGCCCTTCCTGCTTTAGTGAGCGAGCAGCACTCACATGGACCAGAAGCTGGAATCACCCTTAGCTCTTCCATCCCCTTCTTGCCACATGCAAGCCACAAACGACCCTACAGTAGCCAACAGGATGCTTTAGAGATTCCAGTCAGATGACATTGACTTCCTTTGCTCAAATCCTGCAATGGCATCTGCACTGCCCTCATAGCCCTGACTGCTATGTGGTTTATAAGATGCTGTCTAATCCATCCTCTCTGTTCTATCAGAGCTCAGCTCCTGTACCTGTTAGTCATCCACTTGGTCACTCAAAAGTAGCCTCTGTTCTCAGTGTTCCATTCTGGAATGCTCTTACCAGCCCTTCAAACAAAACTCACTCTCTTACTTTACTCGTTGTTGACACATCACCTCCTGAAATCCACAGTTGTGGTCATGATGGAGCCACAAAGACTCACCCTCAACCGCTAGGCTGCCAGGAACATGTCACACAGGCATCTGAGTAAGCGTCTTGAGCTTTGGGCGGTTGAGGTGGCCTTCCACTGTGAGCCCAAGAAAAGAGTGGAATCAAGGCCAATCCTATTGCTGTCCCTGTTTTCTGTTAGAGGCAGCGTCTGGAGTATGGGACAAGGATGGGGTACCACACAGACCTGGCGACCTCAAGGAAAATGACTTGTGATATGGGCTAGGTTCTGGAAAGCTGCTGGTTAAGTCAGGAAGGAGCCTTAGAAATCTGTCCGAGGATCCCAGCAAGTCTTATTGGAGTCCTAGGCCACTTGTGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGTATTCATCTACCAAGCTGGCAAAGAATGACACAGAACTGATAATGGGACCTTCTGAAGCTCACACATGATGGGGAGGAGTTCTAGTCTTGCACAGAGTCCAGACCTGAGCTACAGTCCAGAGGCCTTGCTGGTTACTGAGGGTGTTCAATGAAGATGTCAAAGATGTTCTGTCTCCACAAGTTGACACATGGTTTCTTCCTCAGTTGACACAGCCCATCTGACCATAAACAAGATTTTAAGGTATCGGAATAACTCACAAAGACTGATTGCAGCACAAAGCCCAGAGTCTTGAGATGGATGCTAGACATCCGTCATGGTGCCACCCTGGTGCCCAGCACCCAACCAAAGAAAACACTGGCAGTGCACACGGGAAGGAGAGCTGGGGACAAGCTGTTCACTAGATCCAAAGTCTAAACGATGATGGAACCAGCAGGAAAAGAGTAACAAAATAATTATAGCGATCACAAGAACTCAAGGGAAATACTATGTTAATGAAGATAGAGCTAGGCGTCCTTTAAAAAAGCAAGTCAAGCTTCTAAAAAGACTAACATCTAAGGCAAGCATGCTGGTCCACATCTGCAATCTTAGCACCGAGTAGGCTGAGGCTGAGGCTGAGCCTGAGGCTGGGGCTGAGGCTGAGGCTGGGGCTGAGGCTGGGTCTGGGACTGGGGCTGGGGCTGGGGCTGGGGCTGAGGCTGAGGCTGAGGCTGAGGCTGGGGCTGGGGCTGAGGCTGAGGCTGGGGCTGGGACTGGGGCTGGGGCTGAGGCTGAGGCTGGGGCTGAGGCTGGGGCTGAGGCTGAGGCCGAGGCCGAGGGATGGAGGCCAGCCCGGGCTGTGTAGTGATACCCCATCTTAAAGAAAAATAAAGAAGCAGTAAGAAAACAACCAAAATGGAATCTTGTTAGTGATGTGAGGTTTCACTGACTGGGATTCATGACAAACTGAAGAAAGTAGCAGTTACCTTGAAGACACCAGCAGAGCCATGCAAAACTACACAGAGGAGCACAGGGAAGCAAATCACGGAACAGACCTGGAGACCTCACACTCGTTCATCTGGGTCCCAGGACAGCAGAGGAAAGAAAGTACAGAGAACACGGAAAGAACGGGTAGTGAAAACTTTCCAAATACGGTTAAACATAACAGAAGTTCATTCTCCAAGAAGCTAAAACAAAACAAAAGATTAAAAAAAAAACAAACTAAAACAAAGCAAAAACACCAAGAAACTTCAAACAGGACACACGTCATACACCCCCACCCCAACCCATCACCCCAACCCACACACACCACCATAAGACTTATAATCAAACTGTGAATAACCAGTAATGATAAGAACAACCTTACAGCAGCCAGGGAAAAAAGACTGATTCCACTGAAAGGAAGAAGGACATGTACACAGACAGACAGACAGACAGACAGACAGACACACACACACACACACACACACACATTCTGTGAGAGGCTGTGTGAGTCAAAAGACAGTGGCTAACAAAAGATTCCTCCTCAGGAAGGCCTTCCCTGGCCTCTACCCCTGTGCCAGGCTCTGTGTTCTTACCTTGCTCATGGTCCTCTCTCCTCAAAAATGTGAGCCCTGGAGACCACAGAGCTTTATTTTGAGTTGCTTTGAGTGACAAAGAAATAGTGCCATCCAGGAGGAAGAGAAGAGAAGAGGGTCGGAGAGACACAGCAAATTAAAGCAAGCTAGAGCTGTGTGATTAGAACCGCGATGAGCAGGAGTGAGAGGAGGTAAGGATGCTGTGAGAGACCCTTAACTGAGGGGCACGCCACAGGGCTTGGACCTCTATGGGCAGAAGTGAGGCAGAGGAGGAGTAGTGTTCTACCTGCATTCTAGGAGTTACCCTGCCATCTCACACCAGATAATTTAATTTAAAAGTATGAGTGTGAAATCAGATAGGTGAGAGCTGAGAGCCGGGTTTCAGAAGTGGAACTGGACAGATCTAGAAAACTCCTGTGGGAGCTGGTGACCAGGCAGCTGTAAGGTGAAGGGAGGAGTTTTGACTCGATCGATGGTTGGGTAAGGAATACAGGAAGCAGTGTAGATTGTAGAGGAAAAGGATGCTTTGCTCGTTATCTACCACTGAGGACAAATGAGCAGCCCAAAACAGCCTTCCTTCGTGATCTCAGCATTCCTGGTGATCAAGAAACTACAGGGAGGGGCTGGAGAGTTGGCGCAGCCTGTAAGAGCATTTGTTTGATGGTTTTAATCCCTAGTACCTACATGCAGGCTCACAACTCCTTTAACATCTGACCTCAGCAGGCACCAGGCACACACGGTGCACAAATGTACAAGCAAGCAAAATACTAATACACAGAAAACAATAAAATAAATAAATCTAAAAACCCCAGCATAATAAAAATTTAAAGATCTAGGGGTATAATTCTAACACTGAGGAGACAGGTAGATCTCTGCAAGTTAGAGATTAGTCTGGTCTACATAGCAAATTCCAGGTTAGTCAGGGCTACACAGTGAGGTCCCTCCCCCTTCTCAAAACAAAACAAAACAAAACAACCTGGGAGTATTTGATGTGTCTTTGGCTCCAGTCTCCAGGCTGGCCAGGATGTCAGTCATCTCAGGGCCTGCCTGCCTGAGGAAGGTCCTCCTCCAAGTTCACTCAGTGTTGACAGCCCTTAGGTCCTTAGCCCTTAGACTGCAGGTGGCAGGTCAATTCTATCCTTCTCCTCAGGGAAGCTCACTTGCATGCCTGGTGGCTTCTTTCAGAGTAGAGAAGAGCACCCCAAAACAGAAGCCACTATCCTTTTTTTAACTTAATGTTGAAAGTGGCACGCCATCATTTCTGCCTTTCTGTCAGAAACAGGTACTAATAAACCTAGCTCTCACTCAAGTGGGTAGAGCTAGTTGGGGGTTGCACAAACTCTTGAATCCTGGGAGATGGGACTCATTGGAACATTAGAGTTCATAGGCCATTGGTAGTTACATGTATGCTTTGAGGAGTCCCAGACCTCCTTTGTTGAGAATAGTTGATTTGGGTGATCTATAGCTCACTCAGAAGAGAGCATTCTCTCTGTGGAATGTAGCTCGAAGTCTTTGTGTGAGTCTACAGTCAGTCACTCAGGACCCTCTCCACCTCAGTCTGAGCTTCTAGAGGTCAACAGTGAAGCCCAGATGGTTCTAAATGCCAGGGCAGCCTTCAGGTTGGAGGCCTCACCATGTAAGTGTTGGTTGAAAGGCTCCATAATGCAGATCACACAACTGAAAAGCCACCTCTCCATTTGACAACGCTTGCCGTGCTGCAACTGTAGGACAGACTTAGAGGGAGCTCCTTCCCTTCCCAAGCAACAGGTTCCTAGGGCCTCCTAAGAGAAGGGTCTAGACAAGATTAATGGGTTCTCAAAAAAAGACAAAAAGAAAAATACACAAACGTCTCTTCCTGGAAGTAACATATTAAAAATGCATCAAAGTTGATCCAATCTGTCCGGCTTCCTCCTTCCAAAAGAACACCATCCTCGGAAGTTGTGGACCAAGAACATTCCAGACTTTTTTTTTCCAGTTTAGACAGTCTGGGATTTTAATGGCAAGATCCAAATCAAAGTTGTTCCCAGTCCTTTGAGTCCAAGACAGTTCATCAGCAAACTTGTTGAGAGGAAAATAATTCAGACGTCCTTAAACTTAGGAAAGCTATAACATTGCTTGAGCTTCCTTAGGCACACGGTCCATCTGGTGTTTGCAGAATGTATCCCGTTCTGAGTCTGACTTGACGGTGCTTGGTTGTAGAAACTATTAGGTAAATATCGCACCAATGTGTGAAAGCTCTCATTCCCATTTTACAGGTAAAGACAGTGGGGCCTAGAGGCACTGAGAAGCTTGCCTTCAGTCACAAAAGCAGAGCTGGAACATGAGTGGCTCCTTGCGATTCTACAGCATACCCATGCCATTCCAATTTCATGCTGATGGCTCAGTTGGAAACTGGAAAGAGAGCTAGCCTAGGTCACCTTCTATATGGTGAGCACAGTCTCAGGTACTTCTTTTCATAGCCGTGACTCATGACCCTGTAGGGCCTCTATTTTATGCCCATTTTTCAACAAGGTAATGGGCTCAGAGAGTAAAAACCTGTTAAAGAGCTGGTGGGGGAAACTGGGCTAAGACGGGAGCCCAGGACTTTCTGATTCCAAAGCACATAAGATTCAATACATTCCAAATTCTGATTCTTGAGTGGACGGCATCAACTGCCCCCTCCTCCAGCTCTCAATGTTTTTGTTCATTTACCAGTCCACCGGGCCTGGGACAGAAAAGTGTCTACCTCCTTTGAAAAAATGTAAATCCGTACTTTTAAAGTGCAGCAGAAAGGTGGGGCAGACAGTTAAGGATGACCAGCGCTGGCACCAGCCATTGTCCTCGGCCTCACCTGCAGCACGTGGCTCGGGCCAAGTCCAAAGTTACCCTGATGATGTCACCAGATCTCTTAAAGGCCTCATCACTCATACCCACGTGTCATTTATTATTAAGCAGGTCCGTGATCCATGCAGCATATCTACTGCTTTCCATCCCTGACTTTTCATGACCACAGGAAGAAAAATAGTCCAAGGGCGATTTTTCCCAGCTCCTCATCCTGATTGCCCTTCACCAAGACAGAAGTTCATTTTGAATCATTCCCCAAAATGGCCATCCAGACTTTGATTTCATTAATATAGATGAATACAGTTTGATAATTATCATTTAACTAATGCATATTCTGTACGGATGAGCAAATGGATTCCTGTCATCTCTCCCTCTGAGGTCCATAGATGAAGAGGTGTCTACACTGTACCTTTATCTTTTCTTTCCACTTGTCCTCCTGCATTATTTTTTTTGAGACCCCAGGGTTGTGTCAATGTTGTTGGAAATGTTCTAATGTTCTTCCTTCTGTAGAGATAGAGACCCCCTCCCCCACCCCAGAATCTGAGGTCTGTGGAGTTCAAGTCTGAACCTCATGAGGAAGGATCTCAAGGATGAGAAGTTAAGCAGGTGGAGGACTATGAAAGGGAGAGAGCAAGGGGCACTTGGTCTGACAGACTTGTTAAGGAAGGGTTCAGAGGCAAGGGGGGGCTGGTTGGCCGAGCTTCACCTGGTGCCAGTCGGTGCTGGATTCAAGCACAGGTGCCCAGCAGTTGGTGCTGGAATGAGCCTTGAGTGCGGCCCGGCCTGTGGTGGTGGGGAAATGTGTGGAGTCACTGCACAGGGTCCCACGTTTGGAGTGGCTTTCCAGCCTGGTTTGATGCTCTGGTGTCACCGTCAGGAAAGTATCTGTGATTTTTGAGCAAAGAGACATACACTCATATAATACTGGAGGCACATGTGATTGGTTTAGCTGTGAAAGCCAACGAGCGCACACTAGGCAGGCTGCACTGAGGAAACCCATGGTGCTTTCTGAGGCCCAAACTCTGCTTCTAAGAGTGTTTTCATAGGATCTAATGAGATTCCGAGTCTTTGGTGCGTCAGATAGTTACTAATGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGGGGGGGTTCTGGAGTCTGAATTTCCATCCTCAGGGTTTAATGTGACAAGCACTTTATCCACAATGTTAATGTCCATCCAGTTTCCCATCTCCACTCTTATAGGGGGAGGGTCACCTGCATACCAGTGGTAGAGGGACCCAGATGCTGCCTGATGTCCCTCTGGAAGAACACTCCTCAGGAAATCCACTTTCCCAGCAGCCTCGAAGTGGCTCCCTCAGCAGACTACACATACTGATCCAGCGGGTGTGGCCTGTAGGAGCTGCTCTGAAACCTTACGAGACACTCAGGCACACCAGGTTAAGAAGGGTGGCCTTGGGTTTCCAGAGATTCAGCCAAGAAGTAACTTAGCAGAGGGAAGTGGACAAAGGCCAGGAGAGAAGTCAGTGGACTGCTAGGAGTCCTTAACATAATGAAAAGCCTGTTAAAAGGAAAGGGGTCATGGTTTTATGGCGCTTGCGACACAGACAGTGCTGAGAGGCACTACGGGAACACAGCCCATTACCAAGGTTTCCATAAAAAAGGCCTGCTATCCATTTGGTCAGACAAGTACACCCAGAGGAGCAAGGGCTGAGGAGGTCAGAGGTCAGGGTCAAGGCCAAGGCTGGAGACAGAGTTTGAATTTATTTTTCCCTTAATGTCCCTAATACCATATGCAATCCCTGAGAAGAACCTGTGGCCCCAGGGGATAATGTTGAGTGTTGTCTGTTCTGCCCAG
Seq C2 exon
ATTCTAGGCTTTGACATTCTTCTGATGAAAAACCTGAAGCCCATGCTACTTGAAGTGAATGCAAACCCCAGCATGAGGATTGAGCATGAGTACGAA
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000019339:ENSRNOT00000032204:2
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.005 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0313310=TTL=FE(64.7=100)
A:
NA
C2:
PF0313310=TTL=FE(10.5=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]