MmuINT0167541 @ mm10
Intron Retention
Gene
ENSMUSG00000026885 | Ttll11
Description
tubulin tyrosine ligase-like family, member 11 [Source:MGI Symbol;Acc:MGI:1921660]
Coordinates
chr2:35890272-35903145:-
Coord C1 exon
chr2:35902570-35903145
Coord A exon
chr2:35890368-35902569
Coord C2 exon
chr2:35890272-35890367
Length
12202 bp
Sequences
Splice sites
5' ss Seq
CAGGTAACC
5' ss Score
8.66
3' ss Seq
GTTATGTTTGTTCTGCCCAGATT
3' ss Score
5.96
Exon sequences
Seq C1 exon
GTCCAAACGGTGAAAGAAGGTGACCCCTCCTGGAAGCCCACTTTTATTGTGAAACCGGATAGTGGTTGTCAGGGTGATGGAATCTACCTCATTAAGGATCCCTGTGATGGTCGCCTGACTGGGACCCTCCATAACAGGCCGGCAGTGGTCCAGGAGTACATCCGCAAGCCCCTCCTCATCGACAAACTCAAGTTCGACATCCGTCTGTATGTCTTGCTGAAGTCCTTGGATCCCTTAGAGATTTATATTGCCAAAGATGGACTCTCTAGGTTTTGTACAGAGCCATATCAAGAACCTAACCCCCAGAATCTGCACCATGTCTTTATGCACCTGACCAACTACTCCCTGAATATCCACAGCGGCAAGTTTGTCCACTCTGACAGCGCCAGCACGGGCAGCAAGAGGACTTTCTCTAGCATTCTTTGTAGACTGTCTTCCAAAGGTGTGGACATCAAGAAGGTCTGGTCTGATATCATCTCCTTAGTTATTAAGACTGTCATCGCCCTGACCCCAGAGCTCAAAGTTTTCTACCAGTCAGACATCCCAACAGGGAGGCCGGGGCCCACCTGCTTCCAG
Seq A exon
GTAACCATGCCAACCGCCACCCTGAGTTTTAGCCTTGACTGGGCTGGGGAAAGGCTCCTTGGCTATGTGATGAAGGATGGGTAGGATTGCATTGTCAGAGGTGGGGATACACAGGTGATGGCCACTCTGGGATTTTGTGTTAACCCCCCCAGACCAACTTTGAACTTTCTGTTTCCTAGGTGACTTGGGGCAGGCTACTTTCCTTCATTTAACTATAAATCTGTAAGATTCTTGTGAGAGCACATATGTCATGCATACATTCTTTGTTCACTGGACAGCTGTTACTGCTTACTTGGGGGGGGGGTCGGGCATTGTTGTAGAATCCTGCTGCCCAATGCCAAGAATCCACAGTGGGGAAAAGCCATTAAAGAAGCCATTGACACAGAGGGTTACATGTCGTAGAATCAAGTAGGAAATGGACCAAGTGCAATGGGGTTGTGGACCAAGCCACCATTCCTGGCTCAGTGCAAGAAGTCATGGTAGTCCCACTGAAAGTTGAAGAGAGAGATGGAGCAGGAAAGAATGGATAGGGATCACCACAGGCTATTCTAGGTGAAGACATGCTGCTCTGGAGGTAAGAGGGAAATCTGATGTGTTTGGAACACCCAAACAAGTTCAGTGTGGTTAGGGCACGTTTTGAGGCCCAAAGGAGGGATATGAGAAAAGATGAGGTGGGGGTGAGTAGATCAAGCCCACGTTGTGGAGAGCCTTGGGGGCAGTGGCAACCATCATCAGAGGATTATAAATGGGACAGATCATGGTCAGCTCAGAAGTACACAGTTCCATGATCAGTGGGTTATGTATTGAGCCAAGGCTGGCTGCCAGGTGATTGCTAATGTATGTTTCTGTACATGCAAGAGCAGATGCTGGCTCTGAATAGGAAGATCTTGATAGACATGAAGAGAAAAGCTGAGTTCCATCTGAGGATGTTGGATGGCTAGACTCGGTGACTGCGGGGCTCTGGGGAAAGAGAAGAGATGGTAGCAGAGAGGAGAAGAGTTCCTGGGGTGGAGTTCTTGGGCTCTTGGAAAGATGGATAGAGACTACTTGTAGAGGATCGGGCTAACAGGTAAGGGCCAGGATCTGAAGGCAAATGCCTGCATGGCAGTTGAAAGAAGAGGTTAGTATACAGGTGGATATTTGGGCTGGCATTTGGGAAAGACTGGTGGGTTGGAGAAAGAACTGGGAAGTTATCCACTGCCGTGATTGAAGGCATGAGGTGGTATGGACAAGACCCCCATGACACCCCCAGTTAACAGGAGGATGGAAAGAGGCAGGCAACCAACAAAGGAGACTGAGAAGATGGATCAAGGGGTAATGTGTTGGAAATGCCAAAGAAGAGATGCTCAGAAAATACCTGAGCATGGGCCTGTAGCCTCAAACATTGCCAGGATGTCAGGCAAGACTATTCCTGGAACTGTCCATTATGTTCACTGACACTTGTCCTGGGGACTCTAGCAAAAGCTGTCTTGGGCAGCCAGCCAGTTTGTGAGAGGGAAGGAAATGGAGTATGGTGTAAAACAGCTTTTTAAAACATAGCTCTCAGGGGTAAGACAGGGGCATGGAGACTAGGCACTTATGAGGCACACCCTTCCTGTCACCAGATCTGTCAGACCAGGCAAGAGAAGATACGATGGACTTCTGGGATCCTCTCCTCATAATCTTTCATATTGTTGCATAGCATGACGAGAGTGGGGTGGAGGGTGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGTGTGAGGAATAGAACAACACAGAACATATTTGTAATGATCACACCCAGCTCACTGCCCAGCTCCGATGTGTGTTCTTCCATATTCTCTTCCCCAACCCATCCTCTACATAACCACTATTCTGAATGGTATGTTGACCATTTCCTCGACTTTCAGAACTACATGTGGTCATGCATATATGTCCCCCCAGACAGGACACTGCCTTATCTGACTCGCTTCCGAGCTTCATATCAGCCCCAGTGTGACTCCCACCTTCTGAAGCGCCTGCTCCTTCACAGGCAATGGCCCAAAGGTCTGGCCCATTGCTGGGGCTAGTGGCATGGGTTGGCTTGCACTGGTGCACACCACATAAGTACACACAGTTTATCACTTTTTCTGTCAAAGGAGATCTGGGTGTTTCCTGACTCAGCTAGAAGGGTTGAAGGCAGTAAGGGATGAGAGTGAAGAGAGGGGTCAGAGCAATGTCTCTCTCATAGATAGACACCTACTGACCAGCCCACAAACACACTGGGTTGCTCCAGATCCAGAGACTCAGGGATTTTGCCCCCATCAGCAGGATCATCAGGTGAAAGCCTCTGGCCAGGGATTGAGACAGTGTGAGAAGTAGTAATTGTCCCATCGAGTCCCATCCATGGTCCTATGCCAATCCTGCTCTCTGAGCCTGCAGCTCTTAAGCAGGTATTTGCAATAGCCGTGAGGAGATGGTTAGAAAGGGCTACTGAGGAGGACTTCAGGACAGTGCTAGAACAAAGAAGTCCCAACCCAGGCCACCACAAAGTGAGGGTCACACCCTGGGTTCATCCCTGAGGACAAGTGTGGCCATGCCTGTTTGGCTATTCTAAGAGCATCCCATGGGGCCAGGCAAGCATGACCAAACCACAGAGGCCCAGCAAGGAGGACCGGGTGGTCATTATGTGTGTGTCCTGCAGTAGACAGGCAACAACAGCCACCAAGGTTGGGGTAGGGCCAGCTGTAGGGGCTGAAAGTCCAGATCAGGAGCCACTGCTTTGGTTAGGGTCACAGCTAGCAAATGGGCTCAGAACCTCATGGCCATTTGCCACTATTTGACCACACGCTAAACGCTTCCAGGGTGATGAGACAGGCTAGGAATGAAGCCCTTTCTGGTATAGTAAGTACTGGAGACTTTCTCACCACCTAGTGTGTCTTAGGTTCCCTCTGCACACTCACACCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGCGCGTGCGTGCATGTGTGTGTGTGCGCGTGCATGTGTGTGTGCACACGTGCACGTGTGCACACTGGGAAGTGATGTAGGTGAAGAGGCTTTAAGAAGGTGTCAAGTGGTATCTGTTGCTCTGAGTGCCTTGGATACGCAGTAAGGGAGAGGATTTGGAACCTACTCAGAGCCAAGTCCACTCCTGCTTGCTCTGTCTGAATCACCTTTCAGGATGCTGTTAGCTGGGCTCTAGACACACGGGCAGACCTTGAGGTTTCCATGGTATGGTTCTGATGTCCATTTGCCACGTGACCTGTCCTAAGTCACTTAACTCTTCAGGAACTTAGCTTCCTCCCCTGCCTTACAGGGTCAGCACCCAACTCCTGTGAGACATGGATGACACAGGAAACACTTTGCATACTGTTGAGACTCGGCACAAGTGCAGGAAGTTATTTCTTAGCTGGGCAGGTCTTTCTTGCTTGTAGCAAGACCTGGCCAGATGGCAGCGTTACAGAGCGTAAACCCTGGCCAACCAAATTACACTCATCTGGGGCATGTGACTGTGACCCTGTTCCAGCCATGACCACAGTAATGACTTGGAAAACATGGTGGCCAAGCAACAGCTGGCACGGCTCTGCTGTGGTCAGATTTCCTGTAATCTGCTGCTGAGGAACACAGCTGCCCTGTCATTTCAGCCTCTGCCTTGTCATTGCCCAGGCAGCCCCAGCCACAGAGCCTCACATCTGCTGTCTTGAGGGCAGCAGTGTGACCCTGGCTTAAATATCAAGGTCAGCCTGGGTGTAGACAGTCATGTGGCAGAAACACACACAGAGGGAACACACTTTGTGGCTTGAACTGTATAGTTTTCTTGTTCTCCGTGTCTAATTTTGTCTTTAGCCATGACCCTCCTGTTGGATGTCTAGAGATAGAGCTTTCCTAAGGCCTAGTATAATTCTCCTCTTCCTGTGTCCTCTACCCTCTCTCTTACCCCACAGCCTATACACATCACCAGGCAGAAGCTGAGAATCAGTGTATTGGGGTGGGGGATGGAGGGGCTGTCAAGGGCTGGGGTTTCCCTCTCAGATGGACTGGGTTGAGCTTCTTCCAGCTCCTGCTTACAGCAACTGTAGCTGGCGAGCTCGACAAGTCAACCTTTTCTAGTCTGGATTTTTTTAGCTATAAGTAGCAAGCTTGTTTGTAGCCATACCCCAGAGTTGTTGCACACTCCAGCAAGAGGGAGCTGTGTAAAACAGCCCCCAATACACAGCAGTCACTTAATAAGTGAGAATATGGGTGTTTATTACTCTGACAACAGTTATCACACCTACCCACCTACAGTAACCTTGAAGTTACTGTAAATCGGCAACTATCCTCATTTTGATGTTAACTAGGACATTGGTGATAAAAGTTTGGAATCAAGTTTGGAAACCAAGACCTTAGCCTGGTGTTTGTCGCATCCCAATCCAGCTGCCTAGCTCCCCTGTGCCTCAACCTTGGTTCTTCCACACCAGATCTGCTTCCTCTCCAGAGGTTGTCACCAGTGCCTCCCTGGTTGGACCATTGGTCCTCTGTCTCTGCCAGCCTGGCCTGCTCACTCCTATTCACTAGTTTCAATATTCAGTACCTTCCAAAGTACAGCTCAAGACTTTCTTTCTCTGTAAAGCATTCCTTGTCCACTCTGACTATGTTATTTTCTTCCTTTGCAATATATCACATTCCCTGGGTACCCACTGAGATGAGACCTGAGATAGGTGTGGGCCATGTAGCTAAGGACAAGGCGAGGCCAGGGCCTCTAAGGGGTGCTCCGGTTAGTGTGAAAGACTCACAGAGATAATCCCTGCTCTGTATACATCATGCTGTCCAAGTGCTCACATGAGATGAGGGGAGAGAGTTAACTGTCCAACTGAAGGCTCCCAGAGGGGATGCCCAAGTGAGTTCAAGGCATGATTGAGGGTTTTCCCAGCAAACACCGAAGGGTCTCACATTCTCCTGTTTCCCTGCTACCTTACTGGTTGTTCTTCCCTGGCCTCTTCCTCTGGACCTGTCATTAATGGAAATATATTGGAGGTCCCTGGATATCAATTCTTGGAAACTTGTCTTTGTACATCTACCATCTCTTCCTAAATGATCTCATCCTGCCCTGTGGCTTTAGGGATCAGTTAAGTGCTGTTGAGCCCTAAATTTATATTGCTAATCTTGACCTCTGCTGGAGCTCCAGGCTGATATATACCATTGCTCCCTTGCTCTTCCCACTGGGATAGCTAGTGGGCACCAAACACCAGAGTCAAAAGCAAACCCGCGCCTTCCCTCCTAAAGCCTGCCACCCACAGCTCTTCCTGTTTCTGTAAGCAAGCAGCATTCACATAGACAGAAGCTGGAATCATCCTTTGCTCTTTCATCCCCTTCTTGCCACATGCAACTCACAAAGAACCCTGCAGTAGCCAACAAGAAGCTTCAGAAGCACAAGTCAGGTGACATTGCCTTGCCTTGCTCAAACCCGGCAAGGGCGCCTTCATTGCACTCACAACCCTGGCTGCTATGCGATTTATAAGATGCTGTCTAATCCATCCTCTCTGTTCTATCAGAGCTCAGCTCCTACCATGTTCCTTTTGGCCACCTACTTTGTTTCAGTACTCGTTTCTAGAATGCTCTTGCCAGCCCTTCAAACAGGACTCACTCTTTTACTTTAGTTGCTGTTGACACGTCACTTCCTGAAATCCACAGTTCTGGTCATGATGGAGCCACAAAGACTCACCCTTAACAGCTTGGCTGCCAGAAATATGTAAAAATATGTATGTGAGTAAGTGTTTTGAGCTTTGGATGGTAGAGGTGGCCTACTGTGAGCCCAAGAAAAGGATAGCATCAAAGCAAATCCTGCCGATGTCCCTGCTTTCTGTTAGAGGCAGTGTCTGGAGTATGGGACAAGGCTGGCGTGCCACACAGACCTGGTGACCTCAAGGAAAGAGACTGGTGATGTGGGCCAGATTCTGGAAAGCTGGTTAAGTCAAGAATGAGCCCCAGAAATCTATCCCAGGATCCCAGCAAGTCTTAGTGGAGTCCTAGGCCATTTGTGTGTGTGTTAGGGTGGGCGTGGGGTGTTCATCTACCAAGCTGGAAAAGAATGACCTGAAACTGATAATGTGACCTTCTGGAGCTCACACATGACAGGGAGGAGTTCTAGCCTTGAACAGAGAGTCCATATCTAAGCTACAGTCCAGAGGCCTTGCTGGTTACTCGGGGTGTTTAATGAAGACGTCAAAGATGTTCTGTCTCCATGAATTGGCACATGGATTCTTCCTCAGTTGACACAGCCCATCTGACCATAAACAAGATTTTCAGGTATCAGAATAACCCACAAAGACTGATTGCAGCACAAAGCCCAGAGTCTTGAGATGGATTCTAGATATCTGTCATAGTGCTGCCATTGGTGCCCAATATCCAACTGAAGAAATCACTAACGGTGCACACAGGAAGGAGAGCTGGGGACAAGTGTTCACTAGATTCAAGGTCTTAATGATGAGAGAACCAGCAAGAAAAGAATAACAGAATAATTATAGTGATGCACAAGAGCTCAAGGAAAATACTATCTTAATAAAGAGAGAGCTAGAAGTCCTTAAAAAGAGCAAGTGGAACTTGTAAAGAGTCTGAAATCCAAGCCAAGCATGCTGGTCCATATCTGTAATCCTAGCACTGAGGAGGCTGAGGCTGAAGGATGGAGGCCAACGGGAGCTGTGCCGTGAAATAGAGAAGCAGCAAGAAAACAACCAAAACGGAATCTTGTTAATGATGTGAAGTTTCACTGCCTGGGATCAACTGAAGAAAGCAGCAGTGACCTTTGAAGGCAGCAGCAGAGCTATGCAAAACTACACAGGTACAGGACAGGACAAATCATGGAACAGACAAGGAGACCTAACCCACGTTCATCTGGGTCCCAGGACAACAGAGAAAAGGCAAGCATAGAAAACATATGAAGATCTGGTAGTGGGAGCTTTCCAAACCTCGTTAAACATAATGGAAGTTCACAATCTAAGAAGCTAAAACAAAACAAAAGATGACAAACTAAAAACAAAACGAAAAACACACCAACAAACTCCAAACAGGACACATGTCATACACCCCCACTCATACACCTCCACTCATACACCCCCACCTCCACTACCCCACCACCCCAACCCTACCCACACCCCACCATAAGACTTACAATAAAACTGTGAAAAACCAGTAATGATAAGAACAGCTTTACAGCAGCCATGGAAAAAAGACTGATTCATTGAAAGGAAGAATGGCATGTGTATACACACACACACACACACACTCACACACACCCTGTGAGAGGCTGTGTGAGTCAGAAGACAGTGGCTCCTTACCTGGCCTCTGCCCCCTGTGCCAGGCTTCGAGTTCTTACCTTGCTCATGGCCCTCTCCCCTCAGATATGTGAGCCCTGGAGACAGCAGAGCTTGATTTTGAGCTGCTTTGTTCCTAATGACAAAGAAATGGTGCCATCCAGGAAGAAGAGAAGAGTTGGGGGTAGGAGAGACACAGTTAACTAAAGCAACCTGGAGCTGTGTGGTGAGAACCCACAGTGAGCGCCAGTGAGGGAGGCGGCTGTGTGAGACAGGGTCCAGCCAACCCTTAGCTGAGGCCACGCCACAGGGCTTGAACCTCTATGGGCAGAGGTGAGGCAAGGGGTTGGTCATATTCTATTTGCATTCTAGAAGTTACCCTGACATCTAATGCCAATAATTTAATTTAAAAAGTCTGAGTTTGAAATCAGGGAAAGCTAAGAGCTGAGAGCTGAGAGCTGAGAGAAGGTTCCAGAAGAGAGACTGGGCCATATCTAGAAAGCTTGTGAAGGAGCTGGCAAGCAGCCATAAGGGGTGAAGGGAGAAGTTTTGGCTTGATTGATGGTTGGGTAAGGGATACGGAACCTGTTATCTACCACTGTGGACAAGCAGATCGGCTCAAAACAACCTACCTTCATTATCTCAGCATTCCTGGTGATCAATAAGCTAGGGGCAGGACCTAGAGAGTTGACCAGGCAGTTAAGAGCATTTGTTGCTCTTGCAGAGGACTTGGGTTTGATTCCTAGCACCTACATGCTGGCTCACAAGTCCTTTAACTCCTGACCTCAGCAGGCACCAGGCACCAGGCACACACTGTGCACAAAGGTACAAGCAAGCAAAATGCTAATGTGCAGAATATAATAACATAAATAAATATAAAAACCAACATAATAAACTTTTAAAGATCTAGGGGTATAATTCTAACTCTCTGGAGAATTCCAGGTTAGTCAGAAAAGCTAACACAGTGAGACCCCTCCCCTTTCTCAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGGAAAGAAAGAAGAAAGGAAAGAAAGAAGAAAGACAAAAGAAATCTGGGAGTAACTGATGTGTCTTTGGCTCCAATCTCCAGGCTGGCCAGGGCCTCAGTCCTCGAAGAGCCTCCCTGAGGGAGGTGGTCCTCCAAGTTCACTCACAATGTTGACAGGCCTCAGGCCCTGCCTGGCAGGTGACTAGATAAATCAGGTCAGCTCTCTACAGGGCAGCTCACTTGCATTCCTGGTGGCTTCCTTCAGAGTGGAGAAGAGCACCCCAAGACAGAGCCACTATCCATTTTTAACTTAAAGTTGAAAGAGGCACGCCATCATTTCTGCCTCTTTCTGTCAGAAACAGGTACTAAATGTAGCTTTCACTCAAGAGGGTTGAGATGGCTGGGGAGTTGCACAAACTCTTGAATCCTGGGAGATGAGACTCCTTGGTACATTAGAGACCATAAGCCATGGGTAGTTGTATGTATAATTTGAGGTCCCAGACCTCCTTGTTGAGAACAGTTGATTTTGGGTGGTCTGTAGCTCACTTGGAAGAGAACATTCTCTCTGTAGAATGTAGCTTGAAGCCTTTGTGTGGGTCTAGTCAGTCACTCAGGACCTTCTCCTACTCGGTCTGAAGCTTCTAGAGGTCAACAGCGAAGCTCAGGTGGTTTTAAATGCCAGGGCATCCTTCAGGTGGGGGCCCCACTCTACATAAGTGTTGGTTGAAAGGCTCCATAAGACAGGAGATTACACGACTGAAAAGCCACCTCTCCATTTGACAACACTTGCTGTGACAAAACTGTGAGAGAGACTTGGAGGGAGCTCCTTCCCTTCCCAAGCTGCAGGCTTTCAGGGTCTCCCAAGAGAAGGGACTAGACAAGATTAGTGATTTTTCAAAGAAGACAAAAAAAGGGGCCTAGAGAGATGGCTCAGCGGTTAAAGACACTGGCTGTTCTTCCAGAGGTCCTGAATTCAATTCCCAGCAACCACATGGTGACTCACAACCATCTGTAATGGGATCTGACACCCTCTCCCGGTGCTGTCTTGAAGACAGCTACTTATATCCATAAAATAAATATAAATCTTTTTTAAAAAGACAAAAATACATAAATGTCTCTTCCTGGAAGTAACATATTAAAAATAAGTCAAAGTTGACCTGATCTGGCCGGCTTCCTCCTTCCTAAAGAACACTGTCTCGGGAAATTGTGGACCAAGAAAATTCTAGCTTTTTAGTGGCAAGATCCAAGTTGAAGTTCTTCCCAGTTCTTTGAGTCTGAGATAGTTCATCAGCAAACTGGTTGAGAGGAAAATAATTCAGATGTGCTTAAACTTACAAAAACTATAATGTGCTTGAGCTTCCTTAGACACACAGTCCATCAAATGTGGATTCTATTGCAGAATGGGTTCTATTGTGAGTCCCACTTGATGGTGCGTGGTTGTAGAAACCATTTAGTAACTATAGCACTAATGAGTGCTAATGAATCACACTAATATCACACTATGAATGAGTGAAAGCTCTTGTTTTACAGGTAAAGACAGTGGGGCCTAAAGCCACAAAGAAGCTTGCCTTCATTCTAAAGGCAAAGCTAGAACACGAGTCGTCCCTTGTGACTCTATGGTATGCCCATGCCACTTCCATTTCTTGCTGATGTCTTAGTTGGAAACTGGAAAGGGGGCTAACATAGATCACCTTCTATATGGCGAGCACATTCCTAGGTACCACTTTTCTTAGCCATGATTCATGACCCTGTAGGGCTTCCATTTTATGCCCATTTCTCTACGAGCTAATGTGCTCAGAGAGGCTAAATGCCTCCCCTAAAGCCTGTTAAAGAGCTACTGAGGGAAGCTGAGCTGAGACTGGAGCCCAGGGCTTTCTGATTCCAAAGCATATAAGATTCAGTACATTCAAAACCAGGCACCCATGTTTAGATTCTTGAATAGTTGACATTGTTAGATGCCAAGCAACTTATTGGAGGTTTTGCTGCCCCCTCCTACAGCTCTCAACACCCCTCCCCATTCACCAGTCCACTGGGCCTGGGACAGAGAAGAGTCTACCAGGTTTGAAAAGTATAAACCCATATTTCTAAGATACAACAGAAAGCCAGGGCAGACACTTAAGGATGACCAGAACGAGCATCAGTCCCTGTCCTCAGCCTCATCATCTGCAGCACATGGCTCGGGCCAGGTCCAAAGTTACACCGCTGATGTCACCAGATCTCTTAAAGGCCTCATCACTCATACCCACTTGTCATTTATTATTAAGCAGGCCTGTAATACACGCAGCATGTCTACTGATTTCCACCCCTTCCTTTCATGACCATGGGAAGAAAAATAGACCAAGGGTGATTTTTCCCAGCTCCTCATCCTGATTGCCCTTCACCAAGACAGAAGTTCATTTTGAATCATTCCCAAAAATGGCCATCCAGACTTTGATTTCATTAATATAGATGAAGCTACAGTTTGATAATTATCATTTAACTAATGCATATTCTCTATGGATGAGCAAATGGGTTCCCCTCATCTCTCCCTCTCAAGTCTATAGATGAAGAGGTGTCTGCACTGTACCTCTTTCTTTTCTGTCCGCGTATCCTCCGCATTATTTCTTTTGAGACCCTGGGGTTGTGTCAACGCTGTTGGAAATGTTCTAATGTTCTTCCCTCTCTAGAGATCTAGAAACCCCAAAATCTGAGGTCCATGTAGCTGAAGTCTGAACCTCATGAGGAGGATGCAAAGTTATCCAGGTGGAGGACTGTGTGAGGGGGAGAGCAAGATGCCCGTGGCACTTGGTCTGATAGACTTGTAAAGGAGCCGTTCAGAGGCAAGGGCGGCTGGATGGCAGATCACCTGGGGCCGGTCAGTGCTGAACTCAAGCACAGGCATCCAGCAGTTGGTGCTGGAATGAACGTTGAGTGCAGGCCTGGCCTGTGGTGGGGATGTGTGGAGTCGCTGCATAGGGTCCCATGTTTGGAATGGCTCTCCAGCCTAGTTTTATGTTCTGTTTTCTCTGTCAGGAAAGTGTTAATGCTTTTTGAGCAAAAAGATACACATTCATAATACTGGAGGCACAGGTGATTGGTTTAGATATGAAAGCCAACGCTCTCACACACTAGGTAGGCAGTTCTGAGGAAACCCACAGTGCTTCCCGAGGCCCAAACTCTGCTTCTGTCAAAGAATGTTTCCATAGGATCTAATGAGATTCTGAATCTTTGGTGTGTCATATAGTTACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGCACATTAGTAGGGGTCCTAGGAGCTGGAACACACACCCACACATACACACACCAAGAGATTATATCAGGGTCACTCAGAGGATGGTGACTGCCCCATTCTACACTAATTCAGCGGGTGTGGCCTGTAGAATGAGCTACTTTGAACCCTTACTCATACACGCTCCAGGTTAAGAAAGGTGGCCTCAGGTTTCCAGAAATGCAGCCAAGAAGTAAGTTCACAGAGGAAAGTGGAACAAAGGCCAAGAGAGAACTCAATGGACTCCTAATAGTCCTTGACACAATAAAAAGCCTGTTACAAAGGAAAGGGGTCGTCATTTTATGGCACTTGAGGTGACACTGAGAGAGCCACTATGGGAACGCATCCCATTACCAAGGTTTCTATAAAAAAAAAGATCTGCTATCCATTTGGTCCAACAAGTACACCCAGAGGGGCAAGGGCTGTGGAGGACAGAGATCAGGGTCAAGTCCAAGACCGGAGACCGAGTTTGAATTTATTTTCCCCTTAATGTCCCTAATACCATACTCAATTCCTGAGAAGAAATTGTGGCCCGAGGGAATAATGCCGAGTTATGTTTGTTCTGCCCAG
Seq C2 exon
ATTCTAGGCTTTGACATTCTTCTGATGAAAAACTTGAAGCCTATGCTACTTGAAGTGAATGCAAACCCCAGCATGCGAATTGAGCATGAATACGAA
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000026885:ENSMUST00000112976:4
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.010 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0313310=TTL=FE(62.2=100)
A:
NA
C2:
PF0313310=TTL=FE(10.1=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types