BtaINT0164399 @ bosTau6
Intron Retention
Gene
ENSBTAG00000007488 | ZFP90
Description
ZFP90 zinc finger protein [Source:HGNC Symbol;Acc:HGNC:23329]
Coordinates
chr18:36008479-36023321:+
Coord C1 exon
chr18:36008479-36008547
Coord A exon
chr18:36008548-36023194
Coord C2 exon
chr18:36023195-36023321
Length
14647 bp
Sequences
Splice sites
5' ss Seq
CAGGTGAGC
5' ss Score
9.6
3' ss Seq
GCAAGAATGTGTTCCTACAGGAA
3' ss Score
6.1
Exon sequences
Seq C1 exon
ACCCTGTCCCTGGGAGCCCTGCCCGGCGACCCAGGGATGGCCCCGAGGCCTCCGACGGCCAGGCACCAG
Seq A exon
GTGAGCAGCCCGTCGCTACCCCGGGGTGTATTTGGAGCGGTCATTGTTCTCCACTGGAGCGAATCCCCTTCCCGGCTCTTTCGCCCCCTCGGAGCCTCCTAGCCTTGCGAAACCAGAGTGTCCAGAGCTGGGCGGAGCGGGCTTCTCCGAAGGGGCCCTGCATTGTGGGAAGGAGGGGACCAGGGAGGGGTGGTCTTGTGGGAGGAGTTGAGAGTGGACGTGTTGGGGAGTGCCAGTGTTGAGACTCCCGAGTGCCAAGCCAATTCCTTGAACTCTTTCGATTAGGAATCTGGAGGGTGGGGTGACAGGATAGAAAACTGTAGAGGGGAAAGTGACTGTGAGTGAAGGAGAGAGGAGCCCCAGCTTCTGACCCAGGTGCCAGAGAAGCCTGGTCTGGAGTTGCTTAGGAAGAGGCTGGAGATGGTCTCTTCCCAGGCAAGGAGGGAAACAACAAAGGAAGATTGTCCCATAGCTTTTCGTGTTCTTTTCTGCTCTAACAGGTATAGTAATGCACGTCCCAGGATGTCCAGCCTTCGACTTAATTAATATGATACTGATTTGTGAACCTATTTATTCTTGTGAGAGAGGAGGCACTTTCTAGAAGCATCCCAACTCTGAGCTTACCCATTGAATTACATAGAGTCTATCCGTGAAAATATAACAAGGTTCAGTTGGTGTTTTAATCCACACTCTCCTACAGTTAAGGGGGAAAAAAATCACAAATTCTAGTTGCTAGGGCAGGAGACAGTCGAAGCAGATAAAAATTACTGATGTTCTTTAAAAGCAGTTTACAGTAAATTAAACACAGTATATCATGCCTTTATATTATTTTACTTCTTGTTACATGTTTTCTTTTTAATGAGTGAGCCTTCAGGAGTAAGACAAGTAACAAAACTAGAACAAACCAGTTACTTGGTTTGAGGAGAGCCAGAGGAAATCACTGTCATCAGCACCTTTCCATATAAAGTGTTTTCTCAGTAGCTTGTGAGAATTCAGATGACTTAACATACTTAACACATCATGGAGGTGATTATCATTTCCCCGCTGGGGGTAGGATTACGTTTTGATGGTGAAAATGGATCTGTGTTCCAAGCAGTGAACTTAGAGACCTCTTTAAACTTCACTTTTAAGCCTGTGTTCCCTAAAGCACTCTGGTTCAGCTGTATTCTCATAGAACGGCCTGACAGTGTTCACTTGGGTTACCTACCTCAGGCTGCAGTTGATGACTAGACAGAGGACAGGACATGACAGAACACTGGCCCTACAAATGGAGCTTTTTAGGCAGAAATTTCCCAATGTCAGTGGTTCTCTTTCTTTGAGCATGGCCCTTCAGTTTAGTCGCTCAGTCGTGTCCAACTCTTTGCGACCCCATAAATTGCAGCACGCCAGGCCCCCCTGTCCATCACCAACTCCCCGAGTTCACTCAAACTCAGGTCCATCAAGTCGGTGATGCCATCCAGCCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCCCCAATCCCTCCCAGCATCAGAGTCTTTCCCAATGAGTCAACTCTTCGCATGAGGTGGCCAAAGTACTGGAGTTTCAGCTTTAGCATCATTCCTTCCAAAGAAATCCCAGGGCTGATCTCCTTCAGAATGGACTGGTTGGATCTCCTTGAAGTCCAGGGGACTCTCAAGTGTCTTCTCCAACACCACAGTTCAAAAGCATCATTTCTTTGGTGCTCAGCTTTCTTCACAATCCAACTCTCACATCCATATATGACCACAGGAAAAACCACAGCCTTGACTAGATGGACCTTTGTTGGCAAAGTGATGTCTCTGCTTTTCAATATGCTATCTAGGTGGGTCATAACCGTCCTTCCAAGGAGTAGGCAGTTTTTAATTTCATGGCTGCAGTCACCATCTGCAGTGATTTTGGAGCCCCAAAAAAATAAAGTCTGACACTGTTTCCACTGTTTCCCCATCTATTTGCCATGAAGTGATGGGACTGGATGCCATGATCTTCGTTTTCTGAATGTTGAGCTTTAAGCAAACTTTTTCACTCTCCTCTTTCACTTTCATCAAGAAGCTTTTTAGTTCCTCTTCATTTTCTGCCATAAGGGTGATGTCATCTGCATATCTGAGGTTATTGATATTTCTCCCGGCAATCTTGATTCCAGCTTGTGCTTCTTCCAGCCCAGTGTTTCTCATGATGTACTCTGCATAGAAGTTAAATAAACAGGGTGACAATATACAGCCTCGACATACTCCTTTTCCTATTTGGAACCAGTCTGTTGTTCCATGTTCAGTTCTAAGTGTTGCTTTCCTGACCTGCATATAGGTTTCTCAAGAGGTAGGTCAGGTGGTCTGGTATTCCCATCTCTTGAAGAATTTTCCACAGTTTCTTGTGATCCACACAGTCAAAGGCTTTGGCATAGTCAATAAAGCAGAAATAGATGTTTTTCTGGAACTCTCTTGCTTTTTCGATGATCCAGCGGATGTTGGCAATTTGATCTCTGATTCCTCTGCCTTTTCTAACACCAGCTTGAACATCTGGAAGTTCACAGTTCACGTATTGCTGAAGCCTGCCTTGGAGAATTTTGAGCATTTAGCGTGTGAGATGAGTGCAATTGTGCGGTAGTTTGAGCATTCTTTGGCATTGCCTTTCTTTGGGATTGGAATGAAAACTGACCTTTTCTAGTCCTGTGGCCACTGCTGAGTTTTCCAAATTTCCTGGCAAATTGAGTGCAGCACTTTCACAGCATCATCTTCCCAGGATTTGAAATAGCTCAACTGGAATTCCATCACCTCCACTAGCTTTGTTCGTAGTGATGCTTCCTAAGGCCCACTTGACTTCACATTCCAGGATGTCTGGCTCTAGGTGAGTGATCACACCATCGTGATTATCTGGGTCATGAAGATCTTTTTTGTACAGTTCTTCTGTGTATTCTTGCCACCTCTTCTTAATATCTTCTGCTTCTGTTAAGAGTACAAAAGTTGAATAGTGAGTCATGTGACTACTTATCCAGGAAGTTAATTTAATAGGGAATGACAGCCTCATGTAGAAGTATAGCACTAGAAAGGTGGTGTCAAGTGTTGCTGCAGAGATCCAGAGCCTGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGACAGATGAGCCTGGCAGGCTACCATTCATGGAGTCAAAAAGAGTCTGACACAACTGAGCATCTGGGAACACAGGTTGGGAGGCAAGAAGATGAGGGGCCTACACCTGAAACCATTGTCCTGTATGACAGTCGGTGTGGGAAGATGAGAATACAAGGGATTTTGGGCTTTTTTCTTTTTGGCCTTGGTAATCCATTCATTCATTCAGCAGATAGTCACTGAACCCCTATGTTGTGTTAAGACACTTTTCTGAAGAAGTGAAGTGAAAGTCGCTCAGTTGTATTCAACTCTTTGCAACCCCATGGACTGTACAGACCATGGAATTCTCCAGGCCAGAATACTGGAGTGTAGCCTTTCCCTTCTGTTGGAGATCTTCCCAACCCAGAGATCAAACCCAGGTCTCCCGCATTGCAGGTGGATTCTTGACTAGCTGAGCCATGAGGGAAGCCCAAGACACTTTTCTAGGTGGTTGGGATACATTAGGGAACAAAATTTGTAATGGTCTCTGCTTTTTGTTTACTAATGTTTCCCAGTTGCCTAGAAAAGTGTCCTAACATATCATAGGGGTTGGTTCATTAACTATTTGCTCAATGACTGTATGAATGAATGAATGGAAGGAAGTATGGGAGTTAACATTCAGGTCTGGAAAAACAGTGGGATGTGTGTCTGGTGTGTTCAAGGAGCTGCGAGGAGACTGTTGTAGCTTGAGCCCAAGTTTTTGAGCTGGAAACTGTACAATTAAAGATTGCTGTGAATGATGTGCAGGAGCAAGAGTTTGAAAGTTGGGGCTCCTGCAGGTAAGACCTTCTCCCAGGTCTTGGCTAACAAACAATTGAAGTCGCCCTATGGTGGGAGGGCAGTGGGAGCAGAGATGGGTCAGGTGAGATACCCCCAAATCTTGGGGATCTATGTATAAATTGTTAATAACTATAGCTGTGTAAACACTATGCATTCTTTTTTTTTTTTTTCATTATATATGTACTGTGTTTTTAGTTAGGATTTTGAAAAGCTGTTTACCATTCTTAAAGTTGAAGCCACCGGAAAAGTAGGAAATGAGGAAGGTTTTATAAGCAAAAGCTGCTTGTGGCAACCAGGTTTCTCGGTGTTGTATCTTGAAGAGGAGGCAATGCAAAGGGACCAGGCCCTGGTGTCTGTTGACTTTAGATCCCAAGAGAGCTCTGGCTTGGTCATCAGGATGAACAGACCCAGCAAAAGGTGTCTCAAGTCACTGCAACTCAGACACAGTGTTCCAGGAAAACCAAGCCACTTGCTGAACCAGATCAGGATATTTGTGGTCAGGGATATTCAGGCTCCCTCTGTGTGGAGGCCCCCTTTCTTAATCTCTTCCCGAGCTGACTGTGCTGGTCTTTAAGCTTCAATTCAGACCCTACTTCCCCTGGGTAAGATCAAGTGCCTCTCCTGTGCACTGTGCATACTTGTCATAGTGCTCTCTTAGGTCATGGAGTGATGTGCTTACCCATCTATCTCTGTATGGGGCTTCCTGCTTTTGTGCAGTAGGACCACCTGACTTCTTTCATCCTTTGCTCCAGAGTACACATGCTTTAAGTGGGTGTCTCATGAATGAACATTAATAATCACTTAACCCTAAGAAGTCATTTTATACTTTCTGCATTTTCTTCTCTTCACATAACAAAAATGTAATTTTTCCATTTGTGGTGATGCTCATTTTTTGATAAAGTAACTGCATGAAACAGTGTGACTTTCACTGAAGAGTCTTAATAAATTTGTTTTTAAGACAGTGTTAGTATGTCAAAACCTATTCCTCTAAGACACATTTCAAAAATAAAATTGTTTTCCTGAATTTTCTGTGACTTCTATTACCTTTATTAAAATACATTTTATCAAAGTATGTGAGCATATATTTAATACAGGCTTTTTAGTAAAAAATTCTTTTAGCACTTCATTATTTATTCTCATGAATTTCCTTCTTTTCTCCCTATATATGTTTTTCCCTTAAACACTTCCCTTAAACATTAAGTATAATTTTTGAGAGAATCTTTCATTTTTTAAATCATTTTTAAGGCTGTTTTATATTGCTTAAAATACATGCCAAAATTAACCATTTCTCATAGAACATTTAAATTGCTTCTAATGCTTCTACTATTAATACTGGAATAAAATCCCATTGGTTACAATAGATGATTAAAACAATTTTTTTTAAAATTACATCTGTGTTCTTAAGTAACGCAACCCTCAGAGCAAGAGCTGGCTCTTTGGCAGGTTTTGGTGGCATGCTCACAGTTAATTTGTAGAAACATTTTGATTGCTTTTCAGTTCTGTCTTTTGAAATAATTTACCTATAAAATATTGGGATCCAGGCTTTTTATAGCAAGGATGACTTTCTCTATTTCTTCCTCAATTACTGTCTCTCCTTTTTTCTGTCAACATTGGTGGCCTAGGATTTTAAAATTACCCACTTCACTAAGATCTTTCACATTTCTTAACACATTGTTGGGTATTTTATTGGTTTATCCCCTTATTTTTTTTAATATAACTATTTCTGTGTATTTAAAATTTTGAGTTACTTTCCAGTCCAGTACTCCAGGTGGTTTTCCTAGCTTCTGTCCTTTCAGTTTTATTAGATAATTTTTTCCAGCAGTGAGAAACCAGGCTCTCAACATCCTCAATACATTTACTTATCTGCTCAGTGTTACTGGTATCTCAGCCATGCTAACCATTTCTTCCACCTGCCCTCAGCACTCTTGATGCAGGTGGGTACATTGCCACACCACCTTTCTCATCTTCCAAGGCAGGGCTGTTCTGACTCTTCAACTCTGAGAAGGGAAGGCAGAAGAGAAATGTACAAAATGCAAGGGAGAAAGGAGAATCTGAGATAAAGAGGAGTAGAAGGCTAAGTCAGTTGAATTTTAAATATTAAATCCATCCTTTGATTTCTCTAATAAACATCATTTAGTCAAGGTATATTTTCCATTGATATGGCTGGAATTTTTTTTTTTATTTTAGGATTTTGCATCTAAATTCATAAGATAAGCGATCTATAACTTTAGTTTACTGAAATGTCTTAAAGGTTTTGTTGTTGAGGTTGTACTGGCCTCATAAAATGAACAGGAAAGGTCCCACCTTCCTTTCTCTTGTAAAGTTTATAAAGGTTTGGTATTCTTTCTTTTTTAAACGTTTAGAATAACTACAGTGAGTGAAGACATCTGTTTCTGAGTTTTCCTTCTAGGTAGATTTTTAAATATGAGTCATGGATTATTTGCAGTTTTGATAAGATACAATCTACCTCTGGGATGACCTTGTGCTTTTATTGATAGCATGTTGTGTTCTCCAAGAGTCTGTTCTACTGGCAGTTCATGAATTCTGTTCATTTTTTTCCCCCAATACTGTTTTTCAGCTTAGATTTTTCAAGTTCCTGCCCTGTGTCAGTATTCTGAAAATTTCAAGAGACTGGCTGTGTTTGAAGCCACTTATGTTTAAAAAATTTTCACTCCAGCCTTGATTGCCAAAATTCTGCCATTCCCTGGTTTCTAATCTCCCTTAACCCTCACCTGTGACCCCCGCAAGCTATAGCCCTCTGCTTGAGACAAGCTCAATATTCAGTTTCCTTCCTGTAGCCAAAATCGGCGAGTGCCCCCAGGAAAAACAACTATATTTTCCCATATCCTTTCTGTCATTTACTTCTCTCCTGAATTTTAACATTCTAGCCTTCTCTGTTTTTACACCAATAAGTTGCATTTAACTAGATGCTTTTTGTGAGTGCTTTTGTTGTTGTTCTGGTCCGCTGCAAACTACTATATCTTACCCCGTGGTAGAATCTATTTGTGTTTTTAAAGCTCCATCTAGTGTATATGTTTGTATATAAATATTCTGCTTTTCAAAAAAAAGAAAAACATTTTATCACATATGAAACACGTTAATTATCTGGAAAAGTAAAGTTGGGTGCTATAAATCTCTTCACAGCAGGATGACGTTTGGCCGAACTGTTAAACACTGGTAGTGCAGAAACTGTGTTCCATACTCATTTCCACTATACCTAGTAGTCGCATTCAAGGCGACCTGCATTGCCCCTTTGATCCATCATTTCAGAACAGGCCACTCAAAATTAGTCTGCCTCAGGATTATTCAAAAAAAATCCTACTGGCAGGCTCCTGTTCTATACATATCACCAAAACCAAGGTATCTTTCTTTGTCTATCTGGACATCAGAAAATCTTGCTGGTGGGTCTTCTTGCTAAAAATCTTCCTTAGTTTGTATATGCCTGAGCAATAGACATTTGTATCTCCTTATTTAAAATTTTATTTATTTTTATTTCTTCTCTCACTAGATTTGTCAGAGATTTTTCTGTTTGGCCAGTATTTCAGAGGAGCCAGCTTTTAGATTTGGCTATTAATGCCATCATTTTGCCATTTACCCCTGCTTTTTATAATTCAAGATCAGAATTCACTAATTTTTATATTTTTTAACCCTCAAAATAACTCCTCATTTTCCTTTGGTAAGAACTACCCAGACCCTTTTCATTTACTCAGCAGACATTTTTGGAATGCCTGCTCTATGCCAGGTGGTATTCTTAGCCAGAGTCGCCCTTCAGAACCAGTCAGGAGAAGGTGCCTGCTTCCTGTGGGCTGGCAGTAAGGAGTCAGTGAGAAAATTTAGTGAGAGGATGTGTGGGTGAATGCTCAATAAATGTTAATTGTTGCTTTTTTATGATGTATCACATGAGGGGCTTTTAAATGTTGCCTGGTAGGGCCCTTCACGCTTGGCCAATTTTTGTAATTTGCCCATGTGATTCTGGAAAATTCCAACATACATAGTTTTGAAAATACTGAAGTGAAAAGTCTGAGAAATTGTTGAGGGAGAAAAACATGAAAATATAAGTACAGTTCTGAAATGGAGATAGAGACCAAATACCAGAGGTGGCAGGGGGAGGATGCGGGATCTGGAAAAGCTTCAGAAAGGAAGAGACTGTTGAACTAGTTCTAGAAGGATGACTCAGAATTTTTCGTCTAGAGCTGAGGGAAGAAAATAAACAATGGTCAGAACAGGATGTGCAAAGGCAAGGAAACGTGAAAGAGTAATAATATAGTCAGGGCAAAGAGTCCACTTGTGGAAAGCATGGGATGTATGGCAGGATGCAAAATTAGAAAGATGATTCAGTCACCTAGAGAGAATGACCTGAGGTGGAGATCTAGAACAATTTAGAACAGTGTTATCCAAAACAAACATAATACAAGCTACATGGATAATTTAAAATTTTCTAGTAGCCACAATGTTAAAAAAACGGGTGAAGTTAATTTTAGTAATGTGTACTATTTAAACTAATATAGCCAAAATCTTACCATTTCTACATGAATCAGCGTTTTAAAATGGTTAATGACATGTTTTACTTTTTTTTTTTTTTGTACTAAGTCTTTGAAATCCATTGTTTCACACTTAACTGCATGTCCTAATTTGGGCTAGCCACATTACAAGTATTCAGTATTCACATGTGGCTAGTGGATACTGTATTAGACAGCATAGATCTAGAGCGTTAGGGCATTGTGTGGCCAATTGTATATAATATACCTAATTAAATACTACATTTTCTATTAAATATAATAAAGATTACATATAGTATAAATATAATATTTTAAAATATATAACAAATAATTAAGATTATTTTTACTCATTAGCTGCCAGACTCTGGTTTTCAGCTTTGCAAAGTTTTAAAACTACAAAGTTTCCTGAGTATTAGTTTTAGGGGAGTTCTCCTACAGGGTTGGTATAGGGTATAGTTGGAGGAACCTGTCGCTTTACAGTTGTAAATGTCCTTTCTGGATATACTCTTTCACCCTTTTGCTGGTAGAACTCGTATTTCTTCAGTTCAGGGAGTCTGTGTCATAGATGAGAAAATTGGATCTCCAGGAGATGTGTGTGATTTGCCTAAGGAAACTACACATTTATTAGTTGTGGAGCCTTTTAGGGGCCCATGACATTGGGCCTTCTCAACTTAGCATGTGCTGTTTCCAGTTCTTTGCTTTGGGCTCCATCTTTTGGCCAAGGTCCTCTTTATGTCAGCATGAGGGAGGGGAATATTTAATACTCCTTGTTAATTTTTAAAACTTATTGATTATGAGTTCCAGTTATATCTGGAAGAAGGATAAGCAGTGTTTGTAAGGCATCTTTGGATCATTACAGTCTGAGGTGTGACTTGCATTAGAATGCCCTAAAGCTGATCTAATTCTTAGTGGCTGACTCACACCAAGGCTCTTTTTACCTATTTAATCTTGCAAACTCTTGACTGTCCTTATGTCCGGAAATGGTTCTGGCCTCTGAAGATTTGAAGGTTCCTAAGACAAAGAACTTGACCCCCTAGAAGACCACTGAACAATTAGGTAACAGTCACTGTAATTTATGTAGTCTTACGAGCTGTGCTGAAGAGAAACCCAGGGAGGGAGCTGTGGTGGGGGTGGACTTAACCCAGAGCTGTAGGTAGGAATAGAGCCTCAAGGGGAGAACTTGACTGAGTCTTGGTGAGAGTGTTAGTCAGGCAGAGAAGGGAAGACCAGCCTTTTGAAGCAGAACTTGCACAAGAGAAAGAGATCGTTTTGTGTCAAGGAGGTATAAATGTTTTCCACACTGAACCATGGTGTGCAAGGGAAAGAGAAGCCAAAGCTGAGGCTGTGGGATTAGGTGAGGACTTAGGAAGGGCTCAGGAGCTCACAGCAAGGAGTCCAATTTTTAATCTCAAGGAAAGTTTATTAAATATTTATTAGCTATAGAGAAAATAGGTAATATTCCTACACTCCTGGAATTTATATTCTGCTGTGGGATGCAGCCTGTAAACAAATGAAAATGTCACGTATCAGGTATAAGGACTATGAAAAGGGAAGAGAACAGAATGACAGTTGAGGATTGGGGGGGGGGTGCTATTTTATATGATGTGGTCAGGGAAGGTTGCTTTGGTGAAGTGACATTTGAACAAAAAGCTGAAGAAACTGAGTGGGGAGCCGTGTGCATATCTGCAGGAAGAGACTTCCAAGTCAAGGAACAGGCAAAGCAAAGACCTGAAGGTGGAAGCATGTGTGTTGTGTTCCAGTTGTTAGGAGGGTGGGGTGAGTGAAGGTAAGAGAGCAGTAGGTTGGAGATGAGGTTTAGGATGAAGGCAGGGAGACGGGGCGTGGGGGCGGATTGTGAAGGACTGTGTAGCTACTATAGAGACTGACTTTTACTTGGGGTGAATTGGGATGCCATCAGAGGCTTTGAAGCAAAGGAATGACCTGCTCTGAAAGGTTTTAAGAAGATGAGTCTAGCTGTTATATGGAAAACAGACTTGAGATGGGTGGGGCATGAGTGGAAAAGGCGGGACAAGGTAGGAGATTGTAGCAGTGATCCAGGTAAGAGATGATGGTGGCATGCGCTGAGTGAGGGCAGTAAGTATTGGGAAAAGTGGGAAGAAATTAAGGGTTTGTATGCATGATCAAATGTGTGTTTTAGAGAAGTGACTCTGATAGTACATAGGAAAGAATTGGTGAAACCATGAGTAGTGAAACAGGTTAGCTGTCCAACCAGGGCAAGAAGTGATGAGTGGCATGGACTAGACATATGTTTACTGGTCAGCACATACTTTACTATTCATTCAGCCTATTTGGGGAAGCAGAATAAAGTCAAGAGTCCATGCATTAAACATAGGGAACCAGTTAAGCAAAGGAATACAGGTTGGTTGGCAACTCTGTTCCTAAACCACAGGGGCTATATGTTTAGAGGACAGAGTAGGAATGGAAAGGTGTTACTTCTCACAACCTAACTTAAAATGTCTGCTTTGATCCAAACCTTTTCCCTGCTGGTCATCTGCATCCCAAGACCAGCCTCCCTTCTCTCATTTGTCAATCCCAGGACTGGATTCCCATTCTTTCTTCTCCCCTCCTAATGGTACTTACCCCTCAAGGCCCAGTACATAAGCTTCCTTAAAGTTTCTCTCCTGTGCCCAGAACATTGGTAGCACCTCACTTTACTGTGTATTATTACTGTGTACCTCACAATACACAGTAATAAATAACACATTTTAAAATAAACTGAAACCTATTCAAAGACTGCAGTGTTTTTCATTTGCATTTTTATTCTACCACAGTGCATATGGTAAAGCCAGGTACCTAATACATATCTAGTGTCTTTCTTTTCTTTTTTAATCTAGCATCATCTTGCCTGGCACAGTCAGATCCCTGACCTCTGTCAGAAAAATCTACCACATTTTCAGCCCTTCACTGTTCTTGTGGAGACACAGCCACAGTGTTGAGCAGAGATATGATAGGGAGGAACCATTGTTGTTTATGAATGTGATCATGTACCTCAGTCACTAGGAGATGGGGGCCACTCCCTTTTCTTTAAAATTCAGATCTCAGCCGTCTCCTTAAGGCTCAGCTCAGTCTGGAAACAGATATTTAGTGTTAGGTCAGATACTTACTGGACACTGGTATTTTAGAGTTAAAAAAAGAAAAAAAATACGGCCCCTGCTCTCATAATGCTCACCATCTAACTAGGAAGTTCAGTTGCTCAGTCATGTGCGACTCTGCGACCCCATGGACTGCAGCACGCAAGGCTTCCCTGTGCATCACCAACTCCTGGAGCCTGCTCAGACTCATGTCTGTCACGTCGGTGATGCCACCCAACCATCTCATCCTCTGTCTTCCCCTTCTCCTCCTGCCTTCAGTCTTTCCCAGTATCAGGGTCTTTTCCAATGAGTTGGTTCTTTGCATCAGGTGGCCAAAGTATTGGAGTTTCAGCTTCAGCATCAGTCCTTTCAATGAGTATTCAGAACTGATTTCCTTTAGGATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGGCTTCTCCAACACCACAGTTCGAAAGCATCAGTTCTTCAGTGCTCAGTTTTCTTTATAGTCCACTGGAAAGCCATAGCTTTGACTAGACAGACAGTTGTTGGTAAAGTAATGTCTCTGCTTTTTAATATGCTGTCTAGGTTGGTCATAGCTTCTCTTCCAAGGAGCAAGCGTCTTTTAATTTCATGGCTGCAGTCACCATCTGCAGTGATTTTGGAGCCCAGAAAAACAAAGTCTGTCACTGTTTCCATTGTTTCCCCATCTATTTGCCATGAAGTGATGGGACCAGATGCCATGATCTTAGTTTTCTGAATGTTGAGTTTTAAGCCAGCTTTTTCACTCTCCTCTTTCACTTTCATCAAGAGGCTCTTTAGTTCTTCTTCGCTTTCTGCCATAAGGGTGGTAACAAGGATTAAATAGATTACTAGGTCTGTTTAAATAGTTGTGGATTTGCAGAGCGGCTTAAAGCACATCATATGGGGATTGACCCTCTGTTGGGAGATAGAAGACCTCTGTGAAGATGTGCTAATCTACCTCCAAAGTGTGAAATGTAATTAGCAAGGGTCAGATGGACAGGAGGGTGGGGAGAGGATGATGTCTTCCAGGAACCTAAGAACTCCTTAGGTTCAGTTATAGCTCAGCACACAGGGAGGGCATGAAATCAGGCAGAAACCATGTAACTTTCCCTCACTGCTCCAGCAATCTCATGGCTTTGCTTTACTGCTGATCGTCTTTACATACTTTATTATGTACTTCTTGAGGTAGAAATCCGTTTCACCAAGACCAAAGGACGTATTTCATATTGAGCATGATGACAGGTGTCTTAACAAGGCTTGGTGAGGCAAGACAGAAATCAACACATGAACAACAGAACTTGACTATTCAGAGGCATGGGAGTCCTTAGCCAGCCTGGTTTCAGTGGGGGGTAAGGAAGGAGTGACTGGAGGGGAGTATAGCTTGCAAAATACCTCTGATCTGGCATTTCTAATTCTAGCTAGCCAGCCTACAGAAATTCTAGCATATTTGCTCAAAGGATGTATTGCAGTGATGCTTGTAATAGCAAAATATTGGAATTAATACAAATATCCAAAAGGAATTGGTCCATTTATTCATTCACCAAGTATTTTTTTCAGCATCCACTATTTGCTGGGTATCACTTTAGGCACTTGAGGGGCATATAACTGAATAAGATGGTAAAGTCCCTATTCTCACAGAACGTGCAGTCAGGGAGACAGAAAAGCTAATAAGAAATTCCAGATAATTACTAGAAGTACAAGCATCCTTTTAAATCTGCATCTGTTTCGTTCCTGAGTTAAAGTTCAGGTGGCAGGAATTTGGACAGTGAGAGATACTTGTCTGTGCTAGGAGGAAAATTAAGCATGGTAATATGATGCGTAGTAAATGAGAAGGAGGTGGTGAGACACCTTTTCTCAGGTGGCAATTCTGGATGTGAGACCTAAAGGACTAGTGACTGGTTGTCAGCCATGTGGCAATCCAGCGCTCAGGGTGGGAAGAAGCTTAATATGTTCAGGGGTCAGCAAGGCCAGCAGGGCCAGAGCCCAGGGATGGGGCGAGCTTGAATCTTATTCATAGCACAGTGGAGTACTGTGAGTTTTAGGTGATGGTTGTGTGATGGAACTCCAAATGCACTCTGGAGTGCTGTGAAGCAATTGAAAGTAATGAGGTAAAAGTATACAAAGCACTAAGGGAAGACTTTCAAGATGCATAGCTAAATCTAAAAAGCAGGATGTAGAACAATATAAATGATAGTTCATAAAACAAGACTTTGTGGGGGAGGGGAGGGGGTGAAGGAAGCATGGAAAGGGACGGCTTAGTATATACACCAAACTGTTAATAGTAGTTACTTGTAGGGAGTTTAGTGGGATTGGCAATGGGGGTGAAGGGGTGCAGTCACTTTTTATTCCCTGCTGTATTTGGGTTTTGTAGCAAAGACAGTGCATGGGCAGTGAGGAATTGGTGATAATGTAGACAGACTTGGCTTTGAAGGGAACAAGATGAAAGCTAAGTAGGTGTACAGGATTGTGGAATATATTGCCTCTTGTGACTTTCCTGCATGCCATATTAGATTCTCTATAAAATTGTGTGACAACTAGTATATTTAACCCACTTTGCACCCTCAGGATATCAAACGTGATCACCTTTTTTGATAGACCCTATAGTAGGTTCCCAGTATTGCCATGGGAACATTTGTGGGATTGATCCCTACTTGAGCAAGAATGTGTTCCTACAG
Seq C2 exon
GAATCACTGACATTTAAGGATGTAGCTGTGAACTTCACCCAGGAAGAATGGCACCACGTGGATGCTGCTCAGAGGCGCTTGTACAGGGATGTGATGTTGGAGAACTATAGCCACTTGGTTTCTCTTG
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000007488:ENSBTAT00000032517:2
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion (1st CDS intron)
No structure available
Features
Disorder rate (Iupred):
C1=1.000 A=NA C2=0.023
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
PF0135222=KRAB=WD(100=95.3)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development