BtaINT0166396 @ bosTau6
Intron Retention
Gene
ENSBTAG00000001385 | ZSCAN2
Description
Bos taurus zinc finger and SCAN domain containing 2 (ZSCAN2), mRNA. [Source:RefSeq mRNA;Acc:NM_001101190]
Coordinates
chr21:22703825-22714918:+
Coord C1 exon
chr21:22703825-22704340
Coord A exon
chr21:22704341-22712240
Coord C2 exon
chr21:22712241-22714918
Length
7900 bp
Sequences
Splice sites
5' ss Seq
GTGGTGAGA
5' ss Score
5.46
3' ss Seq
ATTTTTCCTCATTGTTTCAGATT
3' ss Score
10.24
Exon sequences
Seq C1 exon
CCAGACCACTTGTTGAAACTGGAGAAGGGTGCCGTCTTCTCAGGGAGCCTGCCTGGAGAAGACTGAAGGTCAAGATCAGAAGCCTGAGTGATTCCAACCCAAGGACGTGGATGATGGCCTCAGAAGGGCCAAGAGTAACTGCTCCTCGAAGCCCTGTAGTCTGCCTCCCTCAGAAGGAGGACAACCAGGAGGAGGAGGTGGCCACCGTGATCCTGGAGGACGACTCCTGGGTACAGGAAGCTGTGCTGCAGGAAGATGGCCCTGAGACCGAGCCCTTTCCCCAGGGTGCTGGCAAGGGCAGCCCCCATGAGGACGTGGCCGGAGGGCCGCAGGGGGCACTCGGCCGCCTTCGAGAGCTCTGCCGGCGCTGGCTGAGGCCAGAGATGCACACCAAGGAGCAAATGCTGACCGTGCTGCCCCGGGAAATTCAGGCCTGGCTGCAGGAGCATCGGCCTGAGAGTGGCGAGGAGGCGGTGGCCCTGGTGGAGGACTTGACCCAGACCCTTCGGGACAGTG
Seq A exon
GTGAGATGGAGAGCCTCACAGGGAGAGGGTGGGAGCTCCCTCCCAGCCCAAGATGGAGGGGTGTGGTGTTTGCAGAGGAGGAAATTCAGGTGCATCCCGGAACCGAGTCCCCATCAGCCCATCCCGTCGGTCTGTGTGCACGTGATCGGCACGCTGTCACCCCAGATGCCCTGGTTGTGTTCAGTGACAGTTCCAGAATTTCAGCATAAGGAATTACTCTTTTAAGTAATAAGAGTAACTTTTAGGGCTTAGAGGACTATTTTTTTTTCCTACTTGGCTGTGCTGGGTCTTCGTTGCTGCTCAGGCTTTTCTGTCGTTGCAGCGAGCGGGGGCTACTCTCCAGTTGTGGTGCATGGGCTTCTCATTGCGGTGGCTTCTCTTGCTGCAGAGTGGGGGCTCTAGGGCACAAGAGCTTTGGTAGTTGTGGCACATGGGCTTAGTCGCTCCGTAGCGTGTGGAATGTTCCCGATCAGGAATCAAACCCATATCCCCTGCATTGGCAGGTGGATTCTTTGCCACTGAGCCCCCAGGGAAGCACAGGCCTACCGTTGGAGCCACAGGTACATGTTAGCACAGTTGTTTGTGCTGTAGTTGATGGTTGGGAAGCTGATGGAGGTAATGAGGAAAGGGACCGAAGACCCCGGAGACCAGCTCTTGGCACCTGCAGCTGGTTGTGCAGTACACATCCAGATATTTTAAGTTCTAGCAGTTAGATAAACCAAATCCTGTTTTTTTTTAAGTGATTATTTTTTGTGAAATCATAATAAATGACGAGTAAGCCAGCTAATAACTAGGGACTTAGTCTCTGGTATAAAGTCATCTTGGGCTCTTGAAAGAGTAATTCCAAACTGGAGCTTTTTGCAACTTAATATATTTGTCTCTGGTTTTATTATTACCTTGTGGACCCACACATGCCATTTAGCCACCCTGCCTCCTTTCTGGTCTTCAGCTGTAAACTGGGCTGCCTTGATTGCCAAATGTTTACTGCAGATCTGCCTGTGCCCCTGGGCTTCCGGGGTGCTCAGTGGTAAAAAAAATCTGCCTGCCATTGCAGGAGACGTGATCCCTGGGTCGGGAAGATCTCCTGAAGAAGGAAGTGGCAATCCATTCCAGTGTTCTTGCCTAGGAAATCCCATGGACAGAGGAGCCTGGTGGGCTACAGTCCATGGGGTCCCAAGAGTCAGACATGACTTAGAGACTGAACAACAACCACCACCTGTACCCCTAGGACTATTTCAGGACCCATGGGAAACGGCAGCTACCTTTGTGCTGATGAGAACTGCAGAGGTTCAGGGAAAAGGGTTGGAGGGGAGAGGAGAGGCAAGGTCAGTGAAGGTTTTGTGAATGACGTGACCCTTGAGCAGGGGTTGAGCTGGTGGGGGGTTTGGAAAGGTGTGGGGGGAGGGGGAGGTTGTGGCATTCCAGGAGCTGTGCTAAGCAGAGGCCTGGAAGAGTGGACCCCTGTGGGATCATTCGGGTGACCGACTGTAAGGAAGACTGGTGGATTGGAGTGGAAAGTGTGTTTTTAGGAAGTGGTGCGAAGTAGGGTTTGGGGGAAGGGTGGGTGAGGCTTTGGCCTCAGCAGGTTGTAACCTGGGCCCCAGGGGCCGGGGAGGATGCTGAACTCAACGACAGGGTTCAGGTTTTATGCTGGAGGTGGGAGAGCAACTGGGAAGCCGCCTGGACGCTAGGTGTGCAGTGATGGGGTGGGGACAGCAAGGGAAGGGGAGGAGATGGGACACGTGAGAAAGAACTCATGGTAACACCAGCCAGCACTGATGGATCCTCTTTTTGGGCCAAGCAGTATGCCTAGCGTCTTATATGCAAAACTCACATAGATGTCACCACCTTGAGAGATCGGCAGGATTATCATCACCAGGGAAGATAAATGACTCCATTAAGATCATGCCCCCAGTATGAGGCTGAACAAGAATGCCAGCTCAGGGGTCTGAGGACGTGGCTCATGTTCTTAATCTTTTCATCACAAATGAGATGCGAAGTCCTAGTTCTTGGTAGGGTATTGGAAAGAGGGCTACAGATGAGGACTGTAGGTGACTCATCTGTAGGGTCACTAGGTGACTAGAGACTTCCCTGGTGGTCCATTGTTTGAGTCTCTTCGCTTTAAATGCAGGGGCCACAGGTTCAATCCTTGGTCAGGGAACTAGGTATTACATGCCGTGAGTGAGAGTTGCTCAGTCGTGTCTGACTCTGCAACCCACCAGGCTCCTCTGTCCACGGAATTCTCTAGGCAAGAATACTGGAGTGAGTTGCCATTTCCTTCTCCTACATGCTGTGAGACATGACCAAAAAAACCTTTTTTTAAGACAAAGGTGACTAATTCAGAGGCATCTAGTCTAGAGGATTCAGAAGACTGGGAAGGGAAGATGGTTTAGGTGCGGAGTTGTAACAATGCCCAGAGACTTGGGAGGTGTGAATAAAGCTGTACTTTGGAGAAGAGGGTGGTCATGGAGGTTCCACTGTGAGCCCAGGCCTGCACTGAGCACCTTACACCTACATCTCACTAATAATCCCGTGAAGTGTGTGGGACCATCATGTAACAGAGGAGGGGATATGGACATTCAGCAAAGTCAAGCTCTTCTTTGAGAGCTGGTTCGTGGTGGAACCAGGATTCAAACTCCAGTCTGTTTGCTTCCACATGTGTTTGGGGGGATCTCAGAGGTTTTTTTTTTTTAATATTTATTTTTATTTATTCATTTATTTGGCTGCACTGGCTCTTAGATGTGGCTTGCAGACTCTTACTTGGGGCGTGCAAGATCTAGTTCCCTGACCAGGGACAGAACCTGGGCCCCCTTCATTGGGAAGCCATGGAGTCTTAGCTAGTGGACCACCAGGGAAGTCCCTACCCCAGGTTTTATTTGAAGCAAGGTCCCAGATGGTCTTTGACCCTGAAAAATAACTTTTAATTTTACTCTTCCTGCTTAAAAAAAGCAAAAGCCTCTCATCCTTTTTAAAAAACCTTGTTTACTTTTCTAGCGGATGTAACAAGTCTGTGATGAATATCAGGCTCTTGAGTCAGAGGCTAAAGAGAGGCCAGAGGGCTGAAGGGCTGAAGAGAAGCCCCTGGGCTATTGTGCAGTCGGAGTCACAGAGCAGGGGGTCACGTCTCACGAGGCATCTCTGACGCAATGACTGGCCCCCACTGTGACCGCCTTCCCCACCTGGCTTGTTGGAGGGGCTTTGTTTCATCTTTCACAGGACATCCCAGATGGAGAATGTCCAGACTGAGCAGCTTGTCAGATTTCTGCCTCTGAGGTCATCTTCGTTGGTTTTCATTTCTTCAGCATGTGTTCCTGACCTGCCTGGTGATTGCTCAGAGGAACCTCTGCAGTGATCTCCATCTCTTGTCAAGCATGTCCTCAAGATAAGACCACTTGACCTCTAGTCTGTTTGTCCAGCCTGGGACCTTTGGTCACATGTTTTACCCAGTACGTTTTTAAGACCTGGTTAGACCATGTTGTTTAATATTTGACTAGCAGGCACCTCTGGGTGTTCCCAGATCAAATATCTTGTCATTTCAGTTGAGACTGGACTTGTATTAATAGTTTTGAAATTTATTTTCCACAGTTCTGGAGACTCTTTTAAGTCCAAGATCCAAGTGCCATCAGATCTGGTGAGAACCTACTACCTGGCTCACAAACGGATTTTTGTTTGTTTGTTTGTTTTTGTTTTCTTTTTTTTAACTAATTAATTAACTTGGCTGCATTGGGTCTTAGTTGCAGCACGGAGGATCTTCCTTGCGGTGCAGATGTTCTAGTTGTGGCACGTGGGCTCCAGAGCACTCGGGCTCAGTAGTTACGGCTCTCTGGTTTAGTTGCCCCCCTGCATGTGGGATCCTAGGTCCCCAACCAGGGCTTGAATCTGAGTCCTCTGTGTTGCAAGGCAGATTCTTAATTACTGGGCCACCAGGGAAGTCCCTTATATTAATAGTTTATGAGGTAAAGTTCATCTCTCTTTGCGTTTCCCAAGGACATTTTTGATCCCTGTGCATGCATGTTCAGTTGCTCAGTTGTGTCTGACTCTGCGACCCCCAGACACCTCTGTCCATGGAATTCTCCAGGCAAGAATACTGGAGTGGTTTGCTGTGAACTCCATTCCCAGCCCTCATTAAGGCTTTTGCTATTTCACCAGACTGGCAGGAGCCTCCAGAGGGAACATGCTTTCAGCCTCTTCCGCCTGCATGGCAGCTGCTGCAGTCCTACCTGAGCGATGGGGCACTTCTGCTTACACATCCTCTCTAGTCCCCCAGTGTCCCCGGATCAAGCACGACCTCTTTGTTCTGCTCGCACTTGTGGCCCTGTGTGGCCTGGCCCAGGTGGCCCCTGGCTGGTCCTCCCCTGATCCCCTCACCACAGCCCTCGCTGCATTCAGATCATGCTGTTCCTTGAACATAGCCTGTGCTTGTAGCTTTCACCTGTGCTGCTGAATCGTGACTTGGAATGGTCTTGTTCCATCCCTGTGTGATGGTCATCCTCTGAGTACACACCTTTGGACACCTACCTGCTCCATAAAGCAGGTGCTTACTTCCGGCCTCTCTTCCCCATCCCTAGATCTACCACCTAAGAGCATCTCTGTCACCTCTGCTTGAAGTCATTGCCCCTGGAACATTCAGATTCTCCTTCTCTTTTGGCTTTGTATCATATATTGTTTTCAGATTTTTTTTTTTTTGATGTGGACCATTTTTAAAGTCTTTATGGAACTTGTTACAGTATTATTTCTGTTTTGTTTTGAATTTTTGGTCGCAAGGCACGTGGGGTCTTCGTTCCTTGACCAGGGATGGAACCCACACCCCCTGCATTGGAGGGTGAAGTCTTAACCACTGAACCATCAGGGAAGTCTCTTGTTTTCTGTTTGTATCGGTCCTCATCTTATTTTTTCTAGGAGCCTATAAAATCCCCAAAGTCAAGGAACCTGTCTTCTTTTCCATTTTTTTTAAAAACAGCACGCAGTACAGTGCCCTACACATAGTGGAGACTCATTGTTGTTGGAGTGAGAAAAATGAATCTTTCCTGTGTGGAGAAACAACTGCTGGGTCAATGAAGGAGGCAGATGGATAGCTTCATCATTCCAGGCTTATCTGCCTTTCCCTTGAGAAAGCCAAGCTAAACTTGTGTTTTAAAACATAATGGGGTCAAGCCCAAAGTTAGCACAATATTCCAAAATCTCAAAAGGGAGACTGGGTAAGACCTGGGAGAATTCTCAGGCTGGGAGGCAAGTCAGGCCAGGCAGCTTAGTACAGCAAGAGAGGACCTATGCCTTTTTTTTTTTTTTTAATATTTAGGTATTTATTTGACTGTACCCAGTTTTGGTTGCAGCACACGGGATCTGTAGTTGCATGAAAACTCTGAGTTGTGGCATGTGGGATCTAGTACCCTGACCAGGGATTGAACCCGGGACCCCTGCATTGGGAGCGCGGAGTCTTAAGCCGCTGGCCACCAGGGAAGCCCCGAGAGCACCTGCTCTTAGGTTTTCACTCTTGGAAGCTCTGTATTAATTCTTTGTTTATATTTAGCAAACTCAATGGGTATTATCATCTTTTATGCTGTGTTTTTTTTTTTTTTTACGCTGTTGTTAAATACATTTTTATAATTTTATTTATTTATTTGTTTAGGGCTGTGCTGGGTCCCTGTTGCTGTGCGGGCTTCCTCTAGTTGCGGTTCGAGAGCTTCCCATCACAGTGGCTTCTCTTGTTGCAGAGCGCGGGCTCTAGGCATGTGGGCTCAGTAGTTGTGTCTCCCAGGCTCTAGAGCATGGGCTCAGTAGTTGTGGTACACAAGCTTAGTTGCCCCACAGCACATGGAATTATCCCTGGCAAGGGATCGAACCCATGTCCCCTGCATTGGTTGGTGGACTTTTAACGTAAAAACACTGAGCCAGCAGGGAGCCCATATACTCTTGTCAATAAGAAGAGTAGAGAGCAGTGAAGGGTTATAAAGGTATATGTCTTCTTAAAGCCATGATTCTCAGGTTCAGAACAACATCACTTTTAATTCACTTAAATATTTGAAATATATACCACACAGAACTCTTGAGATGTAACGTTATTACTAAACTATTTAGCAGTCATTCATTTAAACTGATAACAGCTCCTTGCTGTTTTTACCAGCACTTCGTCTTTCAAGCAGTCAGAGTTTAGGGGGAACAATGGTCCAAGCCACCTAGGTGCTATCAGGTTCCCACCAGGCTCGCCAAGGCAGCACCCTGATGGGGAGAATCCCACTGGGGCATCAGCTGTATGAGAATTAGAAACCCACTTCTGCATTTCAAACCAGTGGCTCTGACCGTGGTATTGAGACCCAGCGGTATGTCACAGTCAGGTGGGAGGGACCCTTCAAGAATTGTGAGCCTAACACACACTAAAGCACTGATGTCTGTGACCAGTGATCTCGTTGTTCACTTACAGCACATGTACGCTTATCCCCATATTGACAGCAAATTTCTCCACACTTACTCTATTCTGATATGCTTTCTAGTATGGGATAGAAAGCAGAGGCCTCTGGCTGGGCAGGGGGACACACATGGCCCTCTGAATTCCATGTGAGCCTAGAGCCTGGGTCAGGGTAGGAAAATGCAAGAACCATTGGTTTAGGATGCGTTGTAATTGTCTACTAACTAATAAGGGTCCTTTGGCAATTCAACAGTATTTGAATGGACAGTGGTCTGACCCTTTTGAAAAAACTAAAAGTGGATCTCTGCTTCCTAACTTACACAGAAATAGAGCCCTGCTTCACAAGTTACACAGAAATAAATTCAGATGAGTTACAGATCTATACTGTAAACCATCTGAAATCACCTATAGGAGAGTATTTTTGGAATCTTGCAGTGGGGTAGGACTTCTTAATCTTAAAACAAGTCATCAAAGCTAGATTGGACTCATGAAAACAAACAAACAAAAGTCCTTTATATTAAAAAGATACTTTGAAGAAAGTTCAAAGCCAGTTCAGAGACTGGGAGGAAATATTTGCAACAAAGCCTGCAGTGTAGCAGATAAGAGTCAAAATCTTGCTCTACAATTCATAAAAAAAAATTCATAAAAAAGAGCATCTACAATTCATAAAAAAAGTCAACCCAGTGGAATAAAAGGTAAAAGATATGACCTGGCAATTTAGAAATGAATAAAAACGAATTATATCCATAAGAAAAGACGTTCAGCTTTACAGATTACCAGGGAAATACCCATTAAATCGAGATGCTATTCTGTAGCCTGTGAGACCGTCAGAAATGGAATAGTGGGACTTCCCTGGTGACTCAGTGGTTAGGACTTCGCCTTCCAGTGAGTGGAGTGTGGGTTTGATCCCTGGTCTGGGACCTGAGATATTCCACATACCTTAAGGGCAAAAGGCGAAAATATACAATAGAAGCAATATTGTAACACATTCAATAAAGACTTAAAAAATGGTCCCATGTCAAAACAAAAACAAAAACAAAACATTGAATCATGTTTAGAAGAATTCTCTGCCTTTTTGAGCATTGACTTCCTTTCAGACTGATTCCAGAATTCTTCTAGTAAGTAATGTTTTATTTATGTGTTTATTTTTGGCTCTGCTGGGTCTTCATTGCTGTGCAGGCTTTTTCTCTAGTTGCGCGAGTGGGGGCTACTCTCTGGTTGTGGTGCGTGGGCTTGTCACTGCAGTGGCTGCTCTTGTTGCAGAGCACAGGCTCTAGAGCTTGAGAGCTTCCGCAGTTGCAACCCTCGGGGCTCTGGAGCACAGGCTAAATAGATGTAGGGTCTTCCTGGATCCGGCATTGAACCCATGTCTCCCACATGGGCAGGGGATTTCTTCACTGCTGAGCCACCAGGGAAGCCCCTCCCCTTTGGTTTTCTTTTCTCATCATTATAGGAAATTGAGTACAAATTGCACATTTTTCCTCATTGTTTCAG
Seq C2 exon
ATTTTGAGATCCAGAGTGAAAATTGGGAGAGCTCCAACCAGGACATATTCGAGGACGTCGAGTCCCACGAGATGTTCTCAGACGTGCCTGAAGGGGAAGGCATCCCGCAGTCCGACTGGGAAAGTGACGTGGAGAGAGACTGCAACCCCCAAGGGCCCCGGAGAAACACCCCCAGGAAGGACCGCGGGGTGGTGCCCGCCCCGGGAAGGGAAGCTGGCCAGCTCATCGGCCTCCAGGGCACCTACCTGGGCGAGAAGCCCTACGAGTGTCCCCAGTGCGGGAAAACCTTCAGTCGAAAGTCCCACCTCATCACCCACGAGCGGACCCACACGGGCGAGAAATACTACAAATGCGACGAGTGCGGCAAGAGCTTCAGCGATGGCTCCAACTTCAGCAGGCATCAGACCACGCACACCGGGGAGAAGCCCTACAAGTGCCGGGACTGCGGCAAAAGCTTCAGCCGGAGCGCCAACCTCATCACCCACCAGCGGATCCATACGGGCGAGAAGCCCTTCCGGTGCGCTGAGTGCGGCAAGAGCTTCAGCCGGAGCCCCAACCTCATCGCACACCAGCGGACGCACACGGGCGAGAAGCCCTACTCGTGCCCGGAGTGCGGCAAGAGCTTCGGCAACCGGTCCAGCCTGAACACGCACCAGGGAATCCACACAGGCGAGAAGCCCTACGAGTGCAAGGAGTGTGGCGAGAGCTTCAGCTACAACTCCAACCTCATCAGGCACCAGAGGATCCACACGGGCGAGAAGCCCTACAAGTGTCCCGACTGCGGCCAGAGGTTCAGCCAGAGCTCGGCCCTCATCACCCACCGGAGGACGCACACTGGCGAGAAGCCCTACCAGTGCGGCGAGTGCGGCAAGAGCTTCAGCCGCAGCTCCAACCTGGCCACGCACCGCCGGACCCACCTGGTGGAGAAGCCCTACAAGTGTGGGGAGTGCGGCAAAAGCTTCAGCCAGAGCTCCAGCCTCATCGCCCACCAGGGCACTCACACGGGCGAGAAGCCCTACGAGTGCCGGACGTGCGGGGAGAGCTTCAGCTGGAGCTCCAACCTCCTGAAGCACCAGCGGATCCACACAGGCGAGAAGCCCTACAAGTGCGGGGAGTGCGGGAAGGGCTTCAGCCAGCGCTCCCAGCTGGTGGTGCACCAGCGGACGCACACGGGCGAGAAGCCCTACAAGTGCCTCATGTGCGGCAAGAGCTTCAGCCGGGGCTCCATCCTGGTCATGCACCAGAGAGCCCACCTGGGGGACAAGCCCTACCGCTGTCCCGAGTGCGGCAAGGGCTTCAGCTGGAATTCGGTGCTTATCATCCACCAGCGGATCCACACGGGTGAGAAGCCCTACAAGTGCCCCGAGTGCGGCAAGGGCTTCAGCAACAGTTCCAATTTCATCACCCATCAGCGAACTCACCTGAAGGAGAAGCTGTACTGAAAGGGCAGAGAGGGAGGGAGCATGAGGCACAGGGGGCCCGGGAGAGGGACCAGCCACCCTGCCCCCATGCAGGGATGCGTTTTTAGAGGAGCCGTTCCTCCTGAAGGCTTGTTGCCGGGATCTTAACCCCTGCTCACCCTCACTGCTAGGATCCCGTCACGTCAGAGTCAGAGTCAGACAGCGATAACCAAGCATGGGAACGGAAGCTCAGAAAGTTCAGTCCATTTCCTGTGACATTTCTCGACTCTCTTGGCTCTGTCCCTCCTGAACCTCTGTGCCTCAGTTTCCCCTTTGATAGAACAGGGGGGATAGTTCTCCGTGTGCAACAGAAGCCAGCGGGGCCCTCGTTTCAGAGAGAGGCCCCAGACCTGGTCCTTCTGCTGCCACTGTTGGGGGCTGAGGTCCCTTCACCCGAGCTGCGAGCATCCCAGGCCCCCTGCCTTGGCAGAACTGGCTCTTCCTGCCTCTGGGTCCTGGGTTTGGATCTCCGGTCAAGGCGGAGGGCTTCTCCTGTTCTGAGTCATCCACAAGAAGGTAAAGTCCTTTCCTAGAAAGTATCAGGAACATGGAAACACGAGGGAGTCTAGCCAGGAACCTTTCCATTGATAGGAGGTTGCCCAGGACTGCCAGGGAAGGCATGACGGAGAAGCGACGTGTTTACTTTTGTCTCTGCTCACTGTCCTGGGATAAGTCGGCTGCGGGTGGGGGATGCACATACTTTTGCAGAGTTTCAGTTTTCGAGTGTGAGGTGTCATCGGAGCCCCCCGCTGCCCCCCTGGTGGGTGGTGTTTCTGTCTCATTCCGGGTGATCCTCCTGCACTCTGCAGGGTGGCCTTGCATCTTTGCCCACCAGATCCGTGGCCCTGTAATCGCCACGCTGTGTACTTGTCGTTTCTGTCTTACATACGCAGACCTAGAGTTCCATCTGGTAGCTTTTGTGTACAGAGAGCATTCTTTTTAAGGTCAATTTTGAGGCCGCATCGTCTGTCGCCTGAAGAGATCTGGGCTTGAATCAAGAGAAGGTGTCTCCCTTAATCTTGGGACGCTCCTAGGGCTTTGTTCTCGGCCATGAAACAGTCGAGACAGGATGATAGCAGGTGAAGGGGTTTGTTAGGAGGGAAGAGGATGGTAAAAACAGGTTTTTCTCTCCTATGCGTGGGGTCTGCACTCAGAACGCACCTTGGTTTTTACAGGATGGCTGCTCCAAATCACCTAATAAAGTCGAGTCCCATTCTT
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000001385:ENSBTAT00000001821:2
Average complexity
IR
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=0.746 A=NA C2=0.250
Domain overlap (PFAM):
C1:
PF0202312=SCAN=PU(95.5=62.5)
A:
NA
C2:
PF0202312=SCAN=PD(3.4=0.6),PF127602=Zn_Tnp_IS1595=WD(100=9.6),PF0009621=zf-C2H2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=5.4),PF134651=zf-H2C2_2=WD(100=5.4),PF134651=zf-H2C2_2=WD(100=5.4),PF134651=zf-H2C2_2=WD(100=5.4),PF134651=zf-H2C2_2=WD(100=5.4),PF134651=zf-H2C2_2=WD(100=5.4),PF134651=zf-H2C2_2=WD(100=5.4),PF134651=zf-H2C2_2=WD(100=5.2),PF134651=zf-H2C2_2=WD(100=5.4),PF134651=zf-H2C2_2=WD(100=5.4),PF134651=zf-H2C2_2=WD(100=5.0),PF097235=Zn-ribbon_8=WD(100=8.5),PF134651=zf-H2C2_2=WD(100=5.4)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Human
(hg38)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]