GgaALTD1008196-1/2 @ galGal4
Alternative 5'ss
Gene
ENSGALG00000009105 | DPP7
Description
dipeptidyl-peptidase 7 [Source:HGNC Symbol;Acc:HGNC:14892]
Coordinates
chr17:325828-326216:+
Coord C1 exon
chr17:325828-325952
Coord A exon
NA
Coord C2 exon
chr17:326152-326216
Length
0 bp
Sequences
Splice sites
5' ss Seq
GAGGTGTGT
5' ss Score
6.14
3' ss Seq
GTGTCACCTTTGTATTTCAGACC
3' ss Score
8.73
Exon sequences
Seq C1 exon
CAACAACGTGACAGACATGTTCCCTGAGATGCCCTTCACAGAGGCCATGAGAGAGCAGTACTGTTGGAGCCGATGGCGCGTGAGGCCGCGAGCGCAGTGGCTGCGGATCAACTTCTGGGGAGGAG
Seq A exon
NA
Seq C2 exon
ACCTGAAAAGTGCAAGCAACATCATCTTTTCAAATGGAGACTTGGACCCGTGGGCTGGAGGTGGG
VastDB Features
Vast-tools module Information
Secondary ID
ENSGALG00000009105-18-21,19-21-1/2
Average complexity
Alt5
Mappability confidence:
NA
Protein Impact
Protein isoform when splice site is used (Ref)
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF055777=Peptidase_S28=FE(12.1=100)
A:
NA
C2:
PF055777=Peptidase_S28=FE(4.9=100)
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
ACGTGACAGACATGTTCCCTG
R:
ACGGGTCCAAGTCTCCATTTG
Band lengths:
171-269
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]