GgaEX0018783 @ galGal4
Exon Skipping
Gene
ENSGALG00000012418 | KYNU
Description
kynureninase [Source:HGNC Symbol;Acc:HGNC:6469]
Coordinates
chr7:32176028-32193811:+
Coord C1 exon
chr7:32176028-32176101
Coord A exon
chr7:32192204-32192256
Coord C2 exon
chr7:32193726-32193811
Length
53 bp
Sequences
Splice sites
3' ss Seq
TCTACTTTATAAAATTTTAGGTT
3' ss Score
8.1
5' ss Seq
ACAGTATGT
5' ss Score
6.05
Exon sequences
Seq C1 exon
TATTTAAATTCTGGAGCAGGAGGCCTCGCTGCTGCATACATTCACGAGAAGCATTCCCAGAGTATTCAACCAGC
Seq A exon
GTTAGTCGGCTGGTGGGGTCATGAGTTCAAAACACGATTCCTCATGGAAAACA
Seq C2 exon
AATTACAACTAAGTAAAGGAATTAATGGATTTCGGTTATCAAATCCTCCTATTTTACTGGTCTGTTCTCTCCAAGCTGGTTTAGAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSGALG00000012418_MULTIEX2-10/13=9-11
Average complexity
S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
PF0026614=Aminotran_5=FE(14.4=100)
A:
PF0026614=Aminotran_5=FE(10.8=100)
C2:
PF0026614=Aminotran_5=FE(16.8=100)
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
AAATTCTGGAGCAGGAGGCCT
R:
CCAGCTTGGAGAGAACAGACC
Band lengths:
148-201
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]