GgaEX6022730 @ galGal3

Exon Skipping

Gene

ENSGALG00000003157 | MYH7B

Description

NA

Coordinates

chr20:2587028-2588241:-

Coord C1 exon

chr20:2587853-2588241

Coord A exon

chr20:2587319-2587443

Coord C2 exon

chr20:2587028-2587143

Length

125 bp

Sequences

Splice sites

3' ss Seq

ACACCTTCTGCTCCTGCCAGAGG

3' ss Score

6.92

5' ss Seq

GAGGTGAGC

5' ss Score

8.7

Exon sequences

Seq C1 exon

TTACCTCCCTTGCTGCCTGTTCTCGCAAGGAAGAAAGCTGGCCATTCGGGCTGCAGAAGGCGGAAAGAGGCCTGTGGAAGGCTGCCCATGCCAAAGTGCTCCTTCACTGGAAGAAGACCAAAGCACAGGCTGCAGACAGAGATCGAGGAACCTCTCAGTGGACCTGGAGAGAGCCAACTCTGCCTGTGCTGCCCTGGACAAGAAGCAGCGCAACTTTGACAGGATCCTGGCTGAGTGGAAGCAGAAGTATGAGGAAACTCAGGCAGAGCTGGAGGCATCACAGAAAGAGTCACGCAGCCTGAGCACGGAACTCTTCAAGCTCAAGAACGCCTATGAGGAGTCTCTGGACAACCTGGAGACCCTCAAGAGGGAGAACAAGAACCTGCAGG

Seq A exon

AGGAGATTGCTGATCTGACTGACCAGATAAGCATGAGCGGCAAAACCATCCATGAGCTGGAAAAGCTGAAGAAAGCCCTGGAGAATGAGAAGAGCGATATCCAGGCAGCGCTGGAGGAGGCTGAG

Seq C2 exon

GGAGCCCTGGAGCATGAGGAGAGCAAGACGCTGCGCATCCAGCTGGAGCTGAACCAGATCAAGGCTGATGTGGACAGGAAGCTGGCAGAGAAGGATGAGGAGTTTGAGAACCTGAG

VastDB Features

Vast-tools module Information

Secondary ID

ENSGALG00000003157-'43-43,'43-41,44-43=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.291 A=0.595 C2=0.538

Domain overlap (PFAM):

C1:

PF0157614=Myosin_tail_1=FE(14.0=100),PF041569=IncA=FE(55.6=100),PF045827=Reo_sigmaC=FE(67.5=100),PF0003816=Filament=FE(59.0=100),PF131661=AAA_13=PU(11.5=28.8)

A:

PF0157614=Myosin_tail_1=FE(7.3=100),PF041569=IncA=PD(27.5=92.9),PF045827=Reo_sigmaC=PD(27.4=76.2),PF0003816=Filament=FE(30.6=100),PF131661=AAA_13=FE(20.5=100)

C2:

PF0157614=Myosin_tail_1=FE(6.7=100),PF0003816=Filament=PD(2.2=7.7),PF131661=AAA_13=FE(19.0=100)

Main Inclusion Isoform:

ENSGALP00000004988