HsaALTA0009745-2/2 @ hg19

Alternative 3'ss

Gene

ENSG00000196345 | ZNF167

Description

zinc finger protein 167 [Source:HGNC Symbol;Acc:12955]

Coordinates

chr3:44609799-44611620:+

Coord C1 exon

chr3:44609799-44609925

Coord A exon

chr3:44611414-44611416

Coord C2 exon

chr3:44611417-44611620

Length

3 bp

Sequences

Splice sites

5' ss Seq

TGGGTAATG

5' ss Score

5.68

3' ss Seq

TGTCTTCTTTCTTTGGGCAGCAG

3' ss Score

7.34

Exon sequences

Seq C1 exon

GATACTGTGGCATATGAGGACCTATCTGTAGACTACACTCAGAAGAAATGGAAAAGTCTCACACTCAGTCAGAGAGCCCTGCAGTGGAACATGATGCCAGAAAATCACCATAGCATGGCCTCCTTGG

Seq A exon

CAG

Seq C2 exon

GTGAGAACATGATGAAGGGTTCAGAGTTGACTCCAAAGCAGGAATTTTTTAAAGGATCAGAGTCATCTAACAGGACATCAGGGGGACTCTTTGGGGTGGTTCCTGGGGCAGCAGAGACTGGAGATGTTTGTGAAGATACTTTCAAGGAGTTAGAAGGACAAACCTCAGATGAAGAAGGGAGCAGACTAGAAAATGATTTCTTGG

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000196345-5-7,5-6-2/2

Average complexity

Alt3

Mappability confidence:

NA

Protein Impact

Protein isoform when splice site is used (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.471 A=NA C2=0.289

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

NA

C2:

PF0135222=KRAB=PD(0.1=0.0),PF134651=zf-H2C2_2=WD(100=10.5),PF134651=zf-H2C2_2=WD(100=10.5),PF134651=zf-H2C2_2=WD(100=10.5),PF134651=zf-H2C2_2=WD(100=10.5),PF134651=zf-H2C2_2=WD(100=10.5)

Main Inclusion Isoform:

ENSP00000273320