HsaALTA1064286-1/4 @ hg38

Alternative 3'ss

Gene

ENSG00000188629 | ZNF177

Description

zinc finger protein 177 [Source:HGNC Symbol;Acc:HGNC:12966]

Coordinates

chr19:9380057-9382185:+

Coord C1 exon

chr19:9380057-9380139

Coord A exon

NA

Coord C2 exon

chr19:9381148-9382185

Length

0 bp

Sequences

Splice sites

5' ss Seq

ACGGTAAGA

5' ss Score

10.65

3' ss Seq

CTGACCCTTTGTCCCTTCAGAAC

3' ss Score

11.28

Exon sequences

Seq C1 exon

ACTGGGAAACTCAACTTAAACCAAAAGATACAATTGCTATGCAGAACATTCCTGGGGGAAAAACATCCAATGGCATAAACACG

Seq A exon

NA

Seq C2 exon

AACTGTGTCAGAACTCACTCTGGAGAGATGCCCTATGAATGCAGTGACTGTGGGAAAGCCTTCATTTTTCAGTCTTCCCTTAAGAAACACATGAGATCTCATACTGGAGAGAAGCCTTATGAGTGTGATCACTGTGGAAAATCCTTTAGCCAGAGCTCTCATCTGAATGTGCACAAAAGAACTCACACTGGAGAGAAACCCTATGACTGTAAGGAATGTGGGAAGGCTTTCACTGTTCCTTCATCCCTTCAGAAACATGTGAGAACCCACACTGGAGAGAAACCCTATGAATGCAGTGACTGTGGAAAAGCCTTCATCGATCAGTCATCCCTTAAGAAACACACACGCTCTCACACTGGAGAGAAGCCTTATGAGTGTAACCAGTGTGGAAAGTCCTTCAGCACAGGCTCTTACCTTATTGTGCACAAGAGAACTCACACTGGTGAGAAAACCTATGAGTGTAAAGAATGTGGGAAGGCCTTTAGGAATTCCTCTTGCCT

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000188629-9-14,9-13,9-12,9-11-1/4

Average complexity

Alt3

Mappability confidence:

NA

Protein Impact

Protein isoform when splice site is used (No Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.560 A=NA C2=0.109

Domain overlap (PFAM):

C1:

NO

A:

NA

C2:

PF134651=zf-H2C2_2=WD(100=9.5),PF134651=zf-H2C2_2=WD(100=12.4),PF134651=zf-H2C2_2=WD(100=12.4),PF134651=zf-H2C2_2=WD(100=11.9),PF134651=zf-H2C2_2=WD(100=12.4),PF134651=zf-H2C2_2=WD(100=12.4),PF134651=zf-H2C2_2=WD(100=11.9)

Main Inclusion Isoform:

ENSP00000341497