HsaEX0020137 @ hg38
Exon Skipping
Gene
ENSG00000185842 | DNAH14
Description
dynein axonemal heavy chain 14 [Source:HGNC Symbol;Acc:HGNC:2945]
Coordinates
chr1:225192696-225206179:+
Coord C1 exon
chr1:225192696-225192911
Coord A exon
chr1:225204183-225204273
Coord C2 exon
chr1:225205971-225206179
Length
91 bp
Sequences
Splice sites
3' ss Seq
TTATTGATTACATATTTTAGGTT
3' ss Score
7.35
5' ss Seq
ACAGTAAGT
5' ss Score
9.49
Exon sequences
Seq C1 exon
ATTTCAGAAAGAAAAGGAAAAGTAGATATTTGTGTTTTAAATCCAAAGTGTGTCACTCTCAGTGAACTATATGGACAACTGGATCCTAATACTATGGAATGGACTGATGGATTATTATCAGCAACAATTCGAAGTTATGTATATTTTAACACACCAAAGAACACAAAGAAAGACATTGATCTCAGACTAAAGTCAAGAATCTCAGATTTATCCAAT
Seq A exon
GTTTTCAAACTTGATTCCTCTGATACAACAGAGACTGATGATAATATTTTTGAGGAGATAGAGAAAGTTGTTAAAATTCCAGAAAATCACA
Seq C2 exon
ATTTTGATTGGCAGTGGATTATCCTAGATGGCCCAGTGGACACCTTTTGGGTAGAAAATCTGAACTCTGTGCTAGATGATACTAGAACATTGTGCCTAGCAAACAGTGAGAGAATAGCTTTAACTAATAAAATAAGAGTGATTTTTGAAGTGGACAATCTCTCTCAGGCCAGTCCTGCTACTGTCAGCCGATGTGCCATGGTCTATATG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000185842-'83-105,'83-104,84-105
Average complexity
C2
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
NO
A:
NO
C2:
NO
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Mouse
(mm9)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
ACTATGGAATGGACTGATGGATT
R:
GTCCACTGGGCCATCTAGGAT
Band lengths:
167-258
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Genotype-Tissue Expression Project (GTEx)
- Autistic and control brains
- Pre-implantation embryo development