HsaEX0044798 @ hg38
Exon Skipping
Gene
ENSG00000160991 | ORAI2
Description
ORAI calcium release-activated calcium modulator 2 [Source:HGNC Symbol;Acc:HGNC:21667]
Coordinates
chr7:102433530-102439047:+
Coord C1 exon
chr7:102433530-102433661
Coord A exon
chr7:102436230-102436333
Coord C2 exon
chr7:102438944-102439047
Length
104 bp
Sequences
Splice sites
3' ss Seq
TGAATTCTCCCCAAGGGAAGGAA
3' ss Score
-3.07
5' ss Seq
CTGGTAATT
5' ss Score
5.99
Exon sequences
Seq C1 exon
GGGGGACCCCGCGCGACCGGCGGAAGGAGGGAGGGGGCCGCGCTCGGCGCCCCGGCCGGGCCACTGGGCCACAGGCCACGCGGCCACGCAGTCCGAGCGGGAGCCGAGCCGGGCGGGGCGAGGGCAGCTCCG
Seq A exon
GAACGTCCCAGGGATGGAAGTGCTTGGATGCGGTGCTGCTGGCTGCGGATGTGCGCAAGGAGATGGGATGGAGAGCCTGAGTTGGCATTCGTATAAATGACCTG
Seq C2 exon
CCTGGCTCCCACCATGAGTGCTGAGCTTAACGTGCCTATCGACCCCTCTGCTCCTGCCTGCCCTGAGCCCGGCCATAAGGGCATGGATTACCGGGACTGGGTCC
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000160991-'1-15,'1-12,3-15
Average complexity
S
Mappability confidence:
100%=100=100%
Protein Impact
5' UTR
Show structural model
Features
Disorder rate (Iupred):
C1=NA A=NA C2=0.022
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
PF078567=Orai-1=PU(17.8=45.3)
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Mouse
(mm9)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Genotype-Tissue Expression Project (GTEx)
- Autistic and control brains
- Pre-implantation embryo development