HsaEX0072822 @ hg19

Exon Skipping

Gene

ENSG00000155592 | ZKSCAN2

Description

zinc finger with KRAB and SCAN domains 2 [Source:HGNC Symbol;Acc:25677]

Coordinates

chr16:25247326-25263356:-

Coord C1 exon

chr16:25263230-25263356

Coord A exon

chr16:25258028-25258711

Coord C2 exon

chr16:25247326-25252059

Length

684 bp

Sequences

Splice sites

3' ss Seq

ATATGTTTATTTTACTGTAGGAA

3' ss Score

8.43

5' ss Seq

GTGGTAAGA

5' ss Score

8.24

Exon sequences

Seq C1 exon

GAACCAGTGAAAGATGTCCACGTGGCCAGAGGCTTTTCCTACAGAAAGAGTGTGCATCAGATTCCTGCCCAAAGGGACCTCTACCGGGATTTCAGGAAGGAGAATGTTGGGAACGTGGTCTCCCTGG

Seq A exon

GAAGTGCAGTGTCTACATCTAACAAGATAACCCGGTTGGAACAGAGAAAGGAGCCATGGACTCTAGGTCTGCATTCCTCTAACAAGAGAAGTATCCTACGAAGCAACTACGTCAAGGAAAAGTCAGTTCATGCTATTCAGGTCCCTGCAAGGAGTGCAGGAAAAACATGGAGAGAGCAGCAGCAGTGGGGTTTAGAAGATGAAAAGATAGCAGGTGTGCATTGGAGCTATGAGGAAACAAAGACTTTCCTGGCAATTCTCAAAGAGTCTCGCTTTTATGAAACACTTCAGGCCTGTCCCCGAAATAGCCAAGTGTATGGTGCTGTGGCTGAATGGTTGCGAGAATGTGGCTTCCTTAGAACCCCAGAACAGTGTCGAACCAAGTTCAAAAGTCTCCAGAAAAGCTATCGAAAGGTGAGAAATGGCCACATGCTAGAACCCTGCGCCTTCTTTGAGGACATGGATGCTTTGTTGAACCCTGCAGCCCGTGCTCCGTCCACTGATAAACCAAAGGAGATGATACCTGTCCCCAGACTGAAGAGAATTGCCATCAGTGCTAAGGAACACATCAGCTTGGTGGAGGAGGAGGAAGCTGCAGAAGATTCTGATGATGATGAAATAGGCATCGAATTTATCCGCAAGTCTGAAATCCATGGTGCCCCTGTCTTGTTTCAGAATCTCAGTG

Seq C2 exon

ATTTTGAAATCGGAAGTAGCATCAAGGAGGATCCAACACAGATAGTATATAAGGACATGGAACAGCATAGGGCATTAATAGAAAAGTCTAAAAGAGTTGTTTCCCAGAGTACCGACCCCAGCAAATATCGCAAAAGGGAATGCATCTCAGGAAGACAATGGGAAAATCTTCAAGGAATTAGACAGGGAAAGCCGATGTCTCAGCCTAGAGATTTAGGGAAAGCCGTTGTGCATCAGAGGCCTTTTGTGGGGAAGAGACCCTACAGACTTCTCAAATATGGAGAAAGCTTTGGAAGGAGCACTCGTCTGATGTGCCGGATGACCCACCACAAGGAGAATCCTTACAAGTGTGGTGTCTGTGGGAAGTGCTTTGGTAGAAGCAGGAGCCTGATCAGACACCAAAGAATCCACACAGGCGAAAAACCTTTTAAATGTCTTGACTGTGGAAAAAGCTTTAATGACTCCTCAAATTTTGGTGCCCACCAGAGAATCCACACAGGA

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000155592_MULTIEX1-2/3=1-C2

Average complexity

C3

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.256 A=0.070 C2=0.300

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=53.5)

A:

PF0135222=KRAB=PD(0.1=0.0),PF138371=Myb_DNA-bind_4=WD(100=37.6),PF138371=Myb_DNA-bind_4=PU(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=7.1),PF134651=zf-H2C2_2=WD(100=8.4),PF134651=zf-H2C2_2=WD(100=8.4),PF134651=zf-H2C2_2=WD(100=8.4),PF134651=zf-H2C2_2=WD(100=8.4),PF134651=zf-H2C2_2=WD(100=8.4)

Main Inclusion Isoform:

ENSP00000331626