HsaEX0073009 @ hg19

Exon Skipping

Gene

ENSG00000164631 | ZNF12

Description

zinc finger protein 12 [Source:HGNC Symbol;Acc:12902]

Coordinates

chr7:6728064-6744854:-

Coord C1 exon

chr7:6744790-6744854

Coord A exon

chr7:6737316-6737442

Coord C2 exon

chr7:6728064-6732334

Length

127 bp

Sequences

Splice sites

3' ss Seq

CAATCACGGTGCCATTTCAGGGG

3' ss Score

4.76

5' ss Seq

TGGGTGAGG

5' ss Score

6.74

Exon sequences

Seq C1 exon

ATCTGCCTCCGCTTTCACAGTCCTCCAGATTTTTCCAAGAGCAGCAGAAAATGAATAAATCCCTG

Seq A exon

GGGCCAGTGTCATTCAAGGACGTGGCTGTGGACTTCACCCAGGAGGAATGGCAGCAGCTGGATCCTGAGCAGAAGATAACTTACAGGGATGTGATGCTGGAGAACTACAGCAATCTAGTTTCTGTGG

Seq C2 exon

ATGAAGTCTGGCAAACTGATGACCTAATAGAGAGAATCCAGGAAGAGGAAAATAAACCTTCAAGGCAAACTGTGTTCATTGAGACCCTGATTGAAGAGAGAGGTAATGTTCCTGGTAAAACTTTTGATGTAGAAACGAACCCTGTTCCTTCAAGAAAAATAGCCTATAAAAATAGCCTCTGTGACTCATGTGAAAAGTGTTTAACGTCTGTTTCAGAATATATTAGTAGTGATGGAAGCTATGCAAGAATGAAAGCTGATGAATGTAGTGGATGTGGGAAATCACTCCTCCATATTAAGCTTGAGAAAACTCATCCAGGAGATCAAGCTTATGAATTTAATCAAAATGGGGAACCTTATACTCTAAATGAAGAAAGTCTTTATCAGAAAATTCGTATTTTGGAGAAACCTTTTGAATATATTGAATGCCAGAAAGCCTTCCAAAAGGACACTGTTTTTGTTAATCACATGGAAGAAAAGCCCTATAAGTGGAATGGATCT

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000164631_MULTIEX1-2/4=1-C2

Average complexity

C3*

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.333 A=0.000 C2=0.045

Domain overlap (PFAM):

C1:

NO

A:

PF0135222=KRAB=PU(95.0=92.7)

C2:

PF121713=zf-C2H2_jaz=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8)

Main Inclusion Isoform:

ENSP00000385939