HsaEX0073012 @ hg19

Exon Skipping

Gene

ENSG00000197961 | ZNF121

Description

zinc finger protein 121 [Source:HGNC Symbol;Acc:12904]

Coordinates

chr19:9676292-9679758:-

Coord C1 exon

chr19:9679678-9679758

Coord A exon

chr19:9678771-9678851

Coord C2 exon

chr19:9676292-9677785

Length

81 bp

Sequences

Splice sites

3' ss Seq

TTTTTTCTGTTTTACTTCAGAAT

3' ss Score

10.2

5' ss Seq

ATGGTAAGA

5' ss Score

9.48

Exon sequences

Seq C1 exon

GACCTATTCAAACTCAGTCTGTCTCTTGACTGGAGGAGGAGAAGGAAAAGTTGAGCACATTGCCAACCGGAGTTCCCCAAG

Seq A exon

AATGGCAAGTTAAAACCAAAGTGTCAGCACCTCAACAACATTTTTTTTTGGCTTAACAAAACATCAAACGGCATACAAATG

Seq C2 exon

GCAGAAATCCACAATGGAGGGGAACTCTGTGACTTTATGGAAAATGGAGAAATCTTCAGTGAACACTCATGCCTTAATGCACACATGGGAACTGAAAATACAGGGGACACTTATGACTGTGATGAGTATGGAGAAAACTTTCCCATGTTACACAACAGTGCCCCTGCTGGAGAGACACTTTCTGTGTTGAATCAGTGCAGAAAAGCCTTCAGCCTGCCACCAAATGTTCACCAGAGAACGTGGATAGGAGACAAATCCTTTGAATACAGTGACTGTGAGGAAGCCTTTGTTGATCAGTCACATCTTCAGGCAAATAGGATAACTCACAATGGAGAAACACTCTATGAACAGAAGCAATGTGGGAGAGCTTTTACTTACTCCACAAGCCATGCTGTGTCTGTTAAAATGCATACTGTAGAAAAACCCTACGAATGTAAGGAATGTGGAAAATTCTTTAGATATTCTTCATATCTTAATAGTCACATGCGAACCCATACTGG

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000197961-'2-4,'2-2,3-4

Average complexity

C1

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref, Alt. ATG (>10 exons))

No structure available

Features

Disorder rate (Iupred):

C1=NA A=0.000 C2=0.013

Domain overlap (PFAM):

C1:

NA

A:

NO

C2:

PF134651=zf-H2C2_2=WD(100=6.9),PF0013017=C1_1=WD(100=13.1),PF134651=zf-H2C2_2=WD(100=6.7),PF134651=zf-H2C2_2=WD(100=6.4),PF134651=zf-H2C2_2=WD(100=6.7),PF134651=zf-H2C2_2=WD(100=6.7),PF0013017=C1_1=WD(100=12.8),PF134651=zf-H2C2_2=WD(100=6.4),PF097235=Zn-ribbon_8=WD(100=10.3),PF134651=zf-H2C2_2=WD(100=6.7),PF134651=zf-H2C2_2=WD(100=6.4),PF134651=zf-H2C2_2=WD(100=6.7)

Main Inclusion Isoform:

ENSP00000326967