HsaEX0073206 @ hg19

Exon Skipping

Gene

ENSG00000167380 | ZNF226

Description

zinc finger protein 226 [Source:HGNC Symbol;Acc:13019]

Coordinates

chr19:44677013-44681836:+

Coord C1 exon

chr19:44677013-44677105

Coord A exon

chr19:44679137-44679324

Coord C2 exon

chr19:44679651-44681836

Length

188 bp

Sequences

Splice sites

3' ss Seq

TAGTTCTTTTTGTATTTCAGATA

3' ss Score

8.44

5' ss Seq

ACTGTGAGC

5' ss Score

4.2

Exon sequences

Seq C1 exon

GGCATCCACCCTTCAAACAAGATGTATCACCTATAGAAAGAAATGAGCAGCTTTGGATAATGACGACAGCAACCCGAAGACAGGGAAATTTAG

Seq A exon

ATACCTTACTTGTAAAAGCTCTTTTGCTCTATGACCTGGCTCAAACTTAAACTTGGATTTGAAGTTAGAAGAAATGTTGGAAGTCATTTATATATGAAGAAATGTTGGAAGGACTCATATATGCATACATTCCTTGAGTGACTATGAATGACTGCCGGGCAGTAACTTCTGGGCTGTGGTTGTAAACT

Seq C2 exon

GAGAGAAAAATCAAAGTAAGTTAATTACTGTTCAAGACAGAGAATCAGAAGAAGAGCTTTCTTGTTGGCAAATCTGGCAACAAATTGCAAATGACTTAACCAGGTGTCAAGACTCCATGATCAATAATTCTCAGTGTCACAAACAAGGTGATTTCCCTTACCAGGTAGGGACAGAACTGTCTATTCAAATTTCTGAAGATGAGAACTATATAGTAAATAAAGCAGATGGTCCCAATAATACTGGGAATCCAGAGTTTCCTATCTTGAGAACCCAGGATTCTTGGAGGAAAACATTCCTGACTGAGTCACAGAGATTGAACAGAGATCAGCAAATTTCCATAAAAAATAAATTATGTCAATGTAAGAAGGGTGTTGATCCCATCGGTTGGATTTCACATCATGATGGTCATAGAGTACACAAAAGTGAAAAATCTTATAGACCCAATGATTATGAAAAAGACAACATGAAGATTTTGACATTTGATCACAATAGCATGATT

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000167380_CASSETTE2

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence inclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.089 A=0.000 C2=0.128

Domain overlap (PFAM):

C1:

PF0135222=KRAB=PD(0.1=0.0)

A:

NO

C2:

PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.0),PF134651=zf-H2C2_2=WD(100=3.6),PF134651=zf-H2C2_2=WD(100=3.6),PF134651=zf-H2C2_2=WD(100=3.6),PF079757=C1_4=WD(100=7.4),PF134651=zf-H2C2_2=WD(100=3.6),PF134651=zf-H2C2_2=WD(100=3.6),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.6),PF134651=zf-H2C2_2=WD(100=3.6),PF134651=zf-H2C2_2=WD(100=3.6),PF134651=zf-H2C2_2=WD(100=3.6),PF134651=zf-H2C2_2=WD(100=3.6),PF127602=Zn_Tnp_IS1595=WD(100=7.6),PF134651=zf-H2C2_2=WD(100=3.6),PF134651=zf-H2C2_2=WD(100=3.4),PF134651=zf-H2C2_2=WD(100=3.6),PF134651=zf-H2C2_2=WD(100=3.6),PF134651=zf-H2C2_2=WD(100=3.4),PF0184418=HNH=WD(100=5.1)

Main Inclusion Isoform:

ENSP00000300823