HsaEX0073256 @ hg19

Exon Skipping

Gene

ENSG00000196150 | ZNF250

Description

zinc finger protein 250 [Source:HGNC Symbol;Acc:13044]

Coordinates

chr8:146105750-146112287:-

Coord C1 exon

chr8:146112225-146112287

Coord A exon

chr8:146106650-146108221

Coord C2 exon

chr8:146105750-146105843

Length

1572 bp

Sequences

Splice sites

3' ss Seq

TTTTGGATTTGTTCTTTCAGAAT

3' ss Score

9.93

5' ss Seq

TTGGTAAAA

5' ss Score

3.23

Exon sequences

Seq C1 exon

ACAACCTCAAATATGACCACACTACAGCCTGTACACAACAAGACAGTTTATCTTGTCCATGGG

Seq A exon

AATGTGAAACCAAGGGAGAGAGTCAAAATACAGACTTGAGTCCGAAGCCATTAATTTCAGAGCAAACAGTGATTCTGGGGAAAACACCCTTGGGGAGGATTGATCAAGAAAATAATGAAACAAAGCAAAGCTTCTGTCTGAGTCCAAACTCTGTTGACCACCGTGAAGTTCAGGTCTTAAGCCAAAGCATGCCACTCACTCCGCACCAGGCAGTGCCTAGTGGAGAGAGGCCCTACATGTGTGTTGAGTGTGGGAAGTGCTTTGGCCGGAGTTCCCACCTCCTTCAGCATCAGCGTATCCACACTGGAGAGAAGCCCTATGTGTGCAGTGTATGTGGGAAGGCCTTCAGCCAGAGCTCAGTCCTTAGTAAACACAGGAGAATTCACACAGGTGAGAAGCCCTATGAGTGTAATGAGTGTGGAAAAGCCTTTAGAGTGAGCTCAGATCTTGCTCAGCATCACAAGATACATACAGGAGAGAAGCCTCACGAATGTCTTGAGTGTCGGAAAGCCTTCACTCAACTCTCACATCTCATTCAGCACCAGCGGATCCACACGGGAGAAAGGCCATATGTGTGTCCGTTGTGTGGGAAAGCCTTCAACCATAGCACTGTTCTGCGGAGCCACCAGAGGGTACACACTGGGGAGAAGCCTCACAGGTGCAATGAGTGTGGGAAAACCTTCAGTGTGAAGAGGACACTGCTGCAGCACCAGAGGATCCACACCGGGGAGAAGCCCTACACGTGCAGCGAGTGTGGGAAGGCCTTCAGCGACCGCTCAGTCCTCATTCAGCACCACAACGTGCACACCGGGGAGAAGCCCTATGAGTGCAGTGAGTGTGGGAAGACCTTCAGCCACCGCTCCACACTGATGAATCACGAGCGGATCCACACCGAGGAAAAGCCCTATGCATGCTACGAATGTGGGAAGGCCTTCGTTCAGCACTCACACCTGATCCAGCACCAGAGAGTCCACACTGGGGAGAAGCCCTATGTGTGTGGTGAATGTGGGCACGCCTTCAGTGCACGCCGGTCTCTGATCCAGCATGAGAGAATCCACACAGGTGAAAAGCCCTTCCAGTGCACAGAATGTGGCAAAGCCTTCAGCCTGAAAGCAACTCTGATTGTGCACCTGAGGACCCACACGGGCGAGAAGCCATATGAGTGCAATAGCTGCGGGAAGGCCTTCAGCCAGTACTCAGTGCTCATCCAGCACCAGCGGATCCACACAGGCGAGAAGCCCTATGAGTGCGGGGAGTGTGGGCGTGCCTTCAACCAGCATGGCCACCTAATCCAGCACCAGAAAGTGCACAGAAAGTTGTGACCCATGGCTGACACAAGAATCCATTCTCACAGAAACTGCATGTGGAACCACAAGCAGCCTTCAGCCCAAGAGAAGTCTCTGTTAACTCTATAGGAAGCTTTTCTTTGGCGATTCAGTGTCACAAAATAACTCCAGAAAGAAGCACTTAGCGTGCTGTTCCTGTGGAAAAACTTCAGAGACTACCTGTTTTATTTTCCTCAACATCTTGAAGTTATGTTGGAGAGTAATCATACAATTGTAGAGAATTTTG

Seq C2 exon

ATCCTGTGCCCCAGAAACCGTGAGATGTCTCAATTCCCATGCAGGCAAAGGAGGGGAGCTTCACACTCAGCAGACCTCATAGCTGTTACACCAA

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000196150_MULTIEX1-3/4=2-4

Average complexity

C1

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref, Alt. Stop)

No structure available

Features

Disorder rate (Iupred):

C1=0.110 A=0.144 C2=0.857

Domain overlap (PFAM):

C1:

NO

A:

PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.7),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.7),PF134651=zf-H2C2_2=WD(100=5.7),PF134651=zf-H2C2_2=WD(100=5.9)

C2:

NO

Main Inclusion Isoform:

ENSP00000393442