HsaEX0073934 @ hg19

Exon Skipping

Gene

ENSG00000171469 | ZNF561

Description

zinc finger protein 561 [Source:HGNC Symbol;Acc:28684]

Coordinates

chr19:9718008-9727847:-

Coord C1 exon

chr19:9727721-9727847

Coord A exon

chr19:9724697-9724779

Coord C2 exon

chr19:9718008-9722012

Length

83 bp

Sequences

Splice sites

3' ss Seq

CTTTTTCTGCTTAACTTTAGAAT

3' ss Score

9.08

5' ss Seq

ATGGTAAGA

5' ss Score

9.48

Exon sequences

Seq C1 exon

GATTCAGTGACGTTTGATGATGTGGCTGTGGACTTCACCCCAGAGGAGTGGGCTTTACTGGACACAACTGAGAAATACCTCTACAGAGATGTGATGCTGGAGAACTACATGAACCTGGCCTCTGTGG

Seq A exon

AATGGGAAATACAACCTAGAACCAAACGGTCATCACTTCAGCAGGGTTTTTTGAAGAATCAAATATTCAGTGGGATACAAATG

Seq C2 exon

ACAAGAGGCTACAGTGGATGGAAACTCTGTGACTGTAAGAATTGTGGAGAGGTCTTCAGGGAACAGTTTTGCCTTAAGACACACATGAGAGTTCAGAATGGAGGGAATACTTCTGAGGGTAATTGTTATGGAAAAGACACCCTCAGTGTGCACAAGGAAGCCTCTACTGGACAGGAACTTTCCAAATTTAATCCATGTGGAAAAGTCTTTACTCTAACTCCAGGTCTTGCTGTACATCTTGAAGTTCTCAATGCAAGACAACCCTACAAATGTAAGGAATGTGGAAAAGGCTTTAAGTATTTTGCAAGCCTTGATAATCATATGGGAATCCACACTGATGAGAAACTCTGTGAATTTCAGGAATATGGGAGAGCTGTCACAGCTTCTTCACACCTAAAGCAGTGTGTAGCAGTTCATACAGGAAAGAAATCCAAAAAGACTAAGAAATGTGGGAAATCCTTCACTAATTTTTCTCAACTTTATGCACCTGTGAAAACTCA

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000171469-'15-13,'15-12,18-13

Average complexity

C1

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.000 C2=0.007

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF0009621=zf-C2H2=WD(100=5.8),PF0009621=zf-C2H2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=6.6),PF0013017=C1_1=WD(100=13.2),PF134651=zf-H2C2_2=WD(100=6.9),PF134651=zf-H2C2_2=WD(100=6.9),PF134651=zf-H2C2_2=WD(100=6.9),PF134651=zf-H2C2_2=WD(100=6.6),PF134651=zf-H2C2_2=WD(100=6.9),PF134651=zf-H2C2_2=WD(100=5.0)

Main Inclusion Isoform:

ENSP00000303915