HsaEX0074222 @ hg19

Exon Skipping

Gene

ENSG00000196757 | ZNF700

Description

zinc finger protein 700 [Source:HGNC Symbol;Acc:25292]

Coordinates

chr19:12057996-12061578:+

Coord C1 exon

chr19:12057996-12058122

Coord A exon

chr19:12058329-12058389

Coord C2 exon

chr19:12059091-12061578

Length

61 bp

Sequences

Splice sites

3' ss Seq

TTTCTGTGTCTGTATTTTAGGAA

3' ss Score

12.65

5' ss Seq

CAGGTAATT

5' ss Score

8.55

Exon sequences

Seq C1 exon

GACCCAGTGGCCTTTGAGGATGTGGCTGTGAACTTCACCCAGGAAGAGTGGACATTGCTGGATATTTCCCAGAAGAATCTCTTCAGGGAAGTGATGCTGGAAACTTTCAGGAACCTGACCTCTATAG

Seq A exon

GAAAAAAATGGAGTGACCAGAACATTGAATATGAGTACCAAAACCCCAGAAGAAGCTTCAG

Seq C2 exon

GAGTCTCATAGAAGAGAAAGTCAATGAAATTAAAGAAGACAGTCATTGTGGAGAAACTTTTACCCAGGTTCCAGATGACAGACTGAACTTCCAGGAGAAGAAAGCTTCTCCTGAAGTAAAATCATGTGACAGCTTTGTGTGTGCAGAAGTTGGCATAGGTAACTCATCTTTTAATATGAGCATCAGAGGTGACACTGGACACAAGGCATATGAGTATCAGGAATATGGACCAAAGCCATATAAGTGTCAACAACCTAAAAATAAGAAAGCCTTCAGGTATCGCCCATCCATTAGAACACAAGAAAGGGATCACACTGGAGAGAAACCCTATGCTTGTAAAGTCTGTGGAAAAACCTTTATTTTCCATTCAAGCATTCGAAGACACATGGTAATGCACAGTGGGGATGGAACTTATAAATGTAAATTTTGTGGGAAAGCCTTCCATTCTTTCAGTTTATATCTTATCCATGAAAGAACTCACACTGGAGAGAAACCATATG

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000196757_CASSETTE2

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

Show structural model

Features

Disorder rate (Iupred):

C1=0.023 A=0.000 C2=0.064

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=3.0),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.5),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.6),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=3.8)

Main Inclusion Isoform:

ENSP00000254321