HsaEX0074261 @ hg19

Exon Skipping

Gene

ENSG00000227124 | ZNF717

Description

zinc finger protein 717 [Source:HGNC Symbol;Acc:29448]

Coordinates

chr3:75781211-75790519:-

Coord C1 exon

chr3:75790427-75790519

Coord A exon

chr3:75786608-75788496

Coord C2 exon

chr3:75781211-75781272

Length

1889 bp

Sequences

Splice sites

3' ss Seq

TACCTTTTTTCTCATTTCAGCTG

3' ss Score

9.85

5' ss Seq

AAGGTATTC

5' ss Score

6.8

Exon sequences

Seq C1 exon

GGCATTACATTACCAAACCTGAGATGATCTTCAAGCTAGAGCAAGGAGCAGAGCCATGGATAGTAGAAGAAACCCCAAACCTGAGACTTTCAG

Seq A exon

CTGTCCAGATCATTGATGACCTTATTGAAAGGAGCCATGAAAGTCATGATAGATTTTTCTGGCAAATTGTAATCACCAACAGCAACACATCAACTCAGGAGAGAGTTGAATTAGGAAAAACATTTAATTTGAACTCAAACCATGTTTTAAATCTGATTATAAATAATGGAAACAGTTCAGGAATGAAGCCTGGGCAGTTTAATGATTGCCAGAACATGCTTTTCCCTATTAAGCCTGGGGAGACACAGTCTGGAGAGAAACCTCATGTCTGTGATATAACCAGGAGATCCCACAGACATCATGAACATCTTACTCAGCATCACAAGATTCAAACTCTGCTGCAGACTTTTCAATGTAATGAACAAGGGAAAACCTTCAACACGGAGGCAATGTTCTTTATACATAAGAGGGTTCATATAGTACAGACCTTTGGTAAATATAATGAATATGAGAAAGCCTGTAATAACTCAGCTGTTATTGTCCAAGTGATAACTCAGGTAGGACAGCCAACTTGCTGTAGAAAGTCTGACTTCACTAAACATCAGCAGACACACACAGGAGAGAAACCCTATGAATGTGTTGAATGTGAGAAACCCTCCATTAGCAAATCAGACCTTATGCTACAGTGCAAGATGCCTACTGAGGAAAAACCTTATGCCTGTAACTGGTGTGAAAAATTGTTCAGCTATAAGTCCAGCCTCATTATCCATCAGAGAATTCACACAGGGGAAAAGCCCTATGGATGCAATGAATGTGGTAAAACCTTTCGCCGTAAGTCATTCCTCACTTTACATGAGAGAACTCACACAGGGGATAAACCCTACAAATGTATTGAATGTGGAAAAACTTTTCACTGTAAGTCACTTCTCACTTTACATCACAGAACTCACTCAGGGGAAAAGCCCTATCAGTGTAGTGAATGTGGAAAAACCTTTAGCCAGAAGTCATACCTCACAATACATCATAGAACTCACACAGGGGAAAAGCCCTATGCATGTGACCATTGTGAAGAAGCATTTAGCCATAAGTCAAGGCTTACTGTCCATCAGAGAACACACACAGGGGAAAAACCGTATGAATGTAATGAGTGTGGAAAACCCTTTATCAATAAGTCAAACCTCAGGTTACATCAGAGAACTCACACAGGGGAAAAACCCTATGAATGCAATGAATGTGGGAAAACGTTTCACCGTAAGTCATTCCTCACTATCCATCAATGGACTCACACAGGGGAAAAACCCTACGAATGCAATGAATGTGGGAAAACCTTTCGCTGTAAGTCATTCCTCACTGTCCATCAGAGAACTCATGCTGGGGAAAAACCATACGCATGTAACGAATGTGGAAAAACATATAGCCACAAGTCATACCTTACAGTACATCACAGAACTCACACAGGGGAAAAACCCTATGAATGTAATGAATGTGGAAAATCCTTTCACTGTAAGTCATTCCTAACTATACATCAGAGAACTCATGCTGGCAAAAAACCCTATGAATGTAATGAATGTGAGAAAACCTTTATCAATAAGTTAAACCTTGGGATACACAAGAGAACTCACACAGGGGAAAGACCCTATGAATGTAATGAATGTGGAAAAACCTTTCGTCAGAAGTCAAATCTCAGCACCCATCAGGGAACTCACACAGGAGAGAAACCTTACGTATGTAATGAATGTGGAAAAACCTTTCATCGCAAGTCATTCCTCACCATACACCAGAGAACTCACACGGGGAAAAACCGTATGGATGTAATGAATGTGGAAAAACTTTTTGTCAGAAATCATACCTTATTATACATCAGAGAACTCACACCGGGGAAAAGCCCTATGAATGTAATGAATGTGGAAAATCCTTTCATCAGAAGGCAAATCTTCAGAAGCATCAAG

Seq C2 exon

GTGGAAGCAAGAAGCAAGTTTTCTCAGGTATTTGCCACAGGAGCCTGGTGGAGCTCCAGGAG

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000227124_MULTIEX1-6/8=5-7

Average complexity

C1

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref, Alt. Stop)

Show structural model

Features

Disorder rate (Iupred):

C1=0.000 A=0.098 C2=0.000

Domain overlap (PFAM):

C1:

PF0135222=KRAB=PD(0.1=0.0)

A:

PF134651=zf-H2C2_2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=3.2),PF0013017=C1_1=WD(100=6.7),PF134651=zf-H2C2_2=WD(100=3.0),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.2),PF0013017=C1_1=WD(100=6.4),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.0),PF0013017=C1_1=WD(100=7.2),PF134651=zf-H2C2_2=WD(100=3.0),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.0),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=2.9)

C2:

NO

Main Inclusion Isoform:

ENSP00000409514