HsaEX0074261 @ hg38
Exon Skipping
Gene
ENSG00000227124 | ZNF717
Description
zinc finger protein 717 [Source:HGNC Symbol;Acc:HGNC:29448]
Coordinates
chr3:75732060-75741368:-
Coord C1 exon
chr3:75741276-75741368
Coord A exon
chr3:75737195-75739345
Coord C2 exon
chr3:75732060-75732121
Length
2151 bp
Sequences
Splice sites
3' ss Seq
TACCTTTTTTCTCATTTCAGCTG
3' ss Score
9.85
5' ss Seq
CAGGTGAGA
5' ss Score
9.22
Exon sequences
Seq C1 exon
GGCATTACATTACCAAACCTGAGATGATCTTCAAGCTAGAGCAAGGAGCAGAGCCATGGATAGTAGAAGAAACCCCAAACCTGAGACTTTCAG
Seq A exon
CTGTCCAGATCATTGATGACCTTATTGAAAGGAGCCATGAAAGTCATGATAGATTTTTCTGGCAAATTGTAATCACCAACAGCAACACATCAACTCAGGAGAGAGTTGAATTAGGAAAAACATTTAATTTGAACTCAAACCATGTTTTAAATCTGATTATAAATAATGGAAACAGTTCAGGAATGAAGCCTGGGCAGTTTAATGATTGCCAGAACATGCTTTTCCCTATTAAGCCTGGGGAGACACAGTCTGGAGAGAAACCTCATGTCTGTGATATAACCAGGAGATCCCACAGACATCATGAACATCTTACTCAGCATCACAAGATTCAAACTCTGCTGCAGACTTTTCAATGTAATGAACAAGGGAAAACCTTCAACACGGAGGCAATGTTCTTTATACATAAGAGGGTTCATATAGTACAGACCTTTGGTAAATATAATGAATATGAGAAAGCCTGTAATAACTCAGCTGTTATTGTCCAAGTGATAACTCAGGTAGGACAGCCAACTTGCTGTAGAAAGTCTGACTTCACTAAACATCAGCAGACACACACAGGAGAGAAACCCTATGAATGTGTTGAATGTGAGAAACCCTCCATTAGCAAATCAGACCTTATGCTACAGTGCAAGATGCCTACTGAGGAAAAACCTTATGCCTGTAACTGGTGTGAAAAATTGTTCAGCTATAAGTCCAGCCTCATTATCCATCAGAGAATTCACACAGGGGAAAAGCCCTATGGATGCAATGAATGTGGTAAAACCTTTCGCCGTAAGTCATTCCTCACTTTACATGAGAGAACTCACACAGGGGATAAACCCTACAAATGTATTGAATGTGGAAAAACTTTTCACTGTAAGTCACTTCTCACTTTACATCACAGAACTCACTCAGGGGAAAAGCCCTATCAGTGTAGTGAATGTGGAAAAACCTTTAGCCAGAAGTCATACCTCACAATACATCATAGAACTCACACAGGGGAAAAGCCCTATGCATGTGACCATTGTGAAGAAGCATTTAGCCATAAGTCAAGGCTTACTGTCCATCAGAGAACACACACAGGGGAAAAACCGTATGAATGTAATGAGTGTGGAAAACCCTTTATCAATAAGTCAAACCTCAGGTTACATCAGAGAACTCACACAGGGGAAAAACCCTATGAATGCAATGAATGTGGGAAAACGTTTCACCGTAAGTCATTCCTCACTATCCATCAATGGACTCACACAGGGGAAAAACCCTACGAATGCAATGAATGTGGGAAAACCTTTCGCTGTAAGTCATTCCTCACTGTCCATCAGAGAACTCATGCTGGGGAAAAACCATACGCATGTAACGAATGTGGAAAAACATATAGCCACAAGTCATACCTTACAGTACATCACAGAACTCACACAGGGGAAAAACCCTATGAATGTAATGAATGTGGAAAATCCTTTCACTGTAAGTCATTCCTAACTATACATCAGAGAACTCATGCTGGCAAAAAACCCTATGAATGTAATGAATGTGAGAAAACCTTTATCAATAAGTTAAACCTTGGGATACACAAGAGAACTCACACAGGGGAAAGACCCTATGAATGTAATGAATGTGGAAAAACCTTTCGTCAGAAGTCAAATCTCAGCACCCATCAGGGAACTCACACAGGAGAGAAACCTTACGTATGTAATGAATGTGGAAAAACCTTTCATCGCAAGTCATTCCTCACCATACACCAGAGAACTCACACGGGGAAAAACCGTATGGATGTAATGAATGTGGAAAAACTTTTTGTCAGAAATCATACCTTATTATACATCAGAGAACTCACACCGGGGAAAAGCCCTATGAATGTAATGAATGTGGAAAATCCTTTCATCAGAAGGCAAATCTTCAGAAGCATCAAGGTATTCACACGGGGGAGAAACCCTATGAATGTAGCAAATGTGGAAAAACCTTGTCAGAAGTCAGTCCTCACTGTACATCATAGAACCCATACCGGAGAAAAACCTTATGAATGTAATGAGTGTGGGAAAACCTTTTGTCACAAGTCAAACCTCAGTACGCATCAGGGGACTCACTCAGGAGAGAAACCCTATGAATGTGATGAATGTAGGAAAACTTTTTACGATAAGACAGTTCTCACCATACATCAGAGAACTCACACAG
Seq C2 exon
GTGGAAGCAAGAAGCAAGTTTTCTCAGGTATTTGCCACAGGAGCCTGGTGGAGCTCCAGGAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000227124_MULTIEX1-7/9=6-8
Average complexity
C1*
Mappability confidence:
100%=100=100%
Protein Impact
Alternative protein isoforms (Ref)
Show structural model
Features
Disorder rate (Iupred):
C1=0.004 A=0.114 C2=0.000
Domain overlap (PFAM):
C1:
PF0135222=KRAB=PD(0.1=0.0)
A:
PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.6),PF134651=zf-H2C2_2=WD(100=3.5),PF134651=zf-H2C2_2=WD(100=3.6),PF134651=zf-H2C2_2=WD(100=3.6),PF134651=zf-H2C2_2=WD(100=3.6),PF0013017=C1_1=WD(100=7.4),PF134651=zf-H2C2_2=WD(100=3.6),PF134651=zf-H2C2_2=WD(100=3.5),PF0013017=C1_1=WD(100=8.2),PF134651=zf-H2C2_2=WD(100=3.5),PF134651=zf-H2C2_2=WD(100=3.6),PF134651=zf-H2C2_2=WD(100=3.5),PF134651=zf-H2C2_2=WD(100=3.6),PF134651=zf-H2C2_2=WD(100=3.6),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.6)
C2:
NO
Main Inclusion Isoform:
ENST00000477374fB8226
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Mouse
(mm9)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- The Cancer Genome Atlas (TCGA)
- Genotype-Tissue Expression Project (GTEx)
- Autistic and control brains
- Pre-implantation embryo development