HsaEX0074431 @ hg19

Exon Skipping

Gene

ENSG00000167766 | ZNF83

Description

zinc finger protein 83 [Source:HGNC Symbol;Acc:13158]

Coordinates

chr19:53115620-53138406:-

Coord C1 exon

chr19:53138319-53138406

Coord A exon

chr19:53122189-53122315

Coord C2 exon

chr19:53115620-53118050

Length

127 bp

Sequences

Splice sites

3' ss Seq

AAAATGTGTTTTCATTTCAGGGT

3' ss Score

9.4

5' ss Seq

TGGGTGAGG

5' ss Score

6.74

Exon sequences

Seq C1 exon

GATTGACTTCTAAGGACTCTTGGTACATGAGGAAGAAACCCGGAAGGGGAAGAGGAAAGCAAAGGCGTCAGGAATGGTTCTTCCTCAG

Seq A exon

GGTCTATTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTGCTCAGAGGACTCTATACAGAGATGTGATGTTGGAGAATTATAGGAACCTGGTCTCCCTGG

Seq C2 exon

GTATTTTTTCTAAATGTGAGATCAAGGAATTACCACCAAAAAAGGAGAGTAATACAGGAGAAATATTCCAGACAGTAATGTTGGAAAGACATGAAAGCCACGACATACAAGATTTTTGCTTCAGAGAAACCCAGAAAAATGTACATGACTCTCAGTGTCTGTGGAAACATGATTGAAGACATTATAAGCGAGTGCGTGTGACCTATAAGGAAAGTCTCATTGGTAGAAGAGACATGCATGGGAGAAAGGATGATGCACAAAAGCAGCCTGTTAAAAATCAGCTTGGATTAAACCCGCAGTCACATCTACCAGAACTGCAGCTATTTCAAGCTGAAGGGAAAATATATAAATATGATCACATGGAAAAATCTGTCAACAGTAGTTCCTTAGTTTCCCCACCCCAACGTATTTCTTCTACTGTCAAAACCCACATTTCTCATACATATGAATGTAATTTTGTGGATTCATTATTCACACAAAAAGAGAAAGCAAATATTGGG

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000167766_MULTIEX1-6/10=5-10

Average complexity

C2

Mappability confidence:

100%=100=100%

Protein Impact

5' UTR

No structure available

Features

Disorder rate (Iupred):

C1=NA A=NA C2=0.055

Domain overlap (PFAM):

C1:

NO

A:

PF0135222=KRAB=WD(100=95.3)

C2:

PF134651=zf-H2C2_2=WD(100=5.0),PF0013017=C1_1=WD(100=10.4),PF0172213=BolA=WD(100=11.0),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.0),PF0013017=C1_1=WD(100=10.6),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.0),PF0013017=C1_1=WD(100=11.6),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.0),PF0013017=C1_1=WD(100=10.4),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.0),PF0013017=C1_1=WD(100=10.3),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF0009621=zf-C2H2=WD(100=4.4)

Main Inclusion Isoform:

ENSP00000472392