HsaEX0074453 @ hg19

Exon Skipping

Gene

ENSG00000223547 | ZNF844

Description

zinc finger protein 844 [Source:HGNC Symbol;Acc:25932]

Coordinates

chr19:12175528-12192380:+

Coord C1 exon

chr19:12175528-12175691

Coord A exon

chr19:12184846-12184972

Coord C2 exon

chr19:12186127-12192380

Length

127 bp

Sequences

Splice sites

3' ss Seq

ATACATGTGGGATGTTTCAGGAC

3' ss Score

5.28

5' ss Seq

TAGGTAAGA

5' ss Score

9.14

Exon sequences

Seq C1 exon

CACATTGCCGTTCGCCTCAGTCTTTGGCCCCTCCCGCCGGGTGAGGTTGGCACCCCGTTTTTCCTGCTCTGAGAGGGACCGGTTGCCACCGCCATACTTCTGTCGCCCTGTCGTCTGTGTTGTGACTGCTTTGGACGTGGGAGTCACCTGAAAGCCAGGAAATG

Seq A exon

GACTTGGTGGCTTTCGAGGATGTGGCTGTGAACTTCACCCAGGAGGAGTGGTCTTTGCTGGATCCTTCCCAGAAGAATCTCTACAGAGAAGTGATGCAGGAAACCTTGAGGAATCTGGCCTCCATAG

Seq C2 exon

AAGTCTTCTGGGAGAGAGAGTTGATGAAAATACAGAAGAAAATCATTGTGGAGAAACTTCTAGCCAGATTCCAGATGACACACTGAACAAAAAAACTTCTCCTGGAGTAAAATCATGTGAAAGCAGTGTGTGTGGAGAAGTCTTCGTGGGTCATTCTTCCCTTAATAGGCACATTAGAGCTGACACTGCACACAAGCCGTCTGAGTATCAGGAATATGGACAGGAGCCATATAAGTGTCAACAACGTAAGAAAGCCTTCAGATGTCACCCCTCCTTTCAAATGCAAGAAAAGGCTCACACTGGAGAAAAACTCTATGATTGTAAAGAATGTGGAAAAACCTTCATATCCCATTCAAGCATTCAAAGACACATGATAATGCACAATGGAGATGGAACTTATAAATGTAAGTTTTGTGGGAAAGCCTGCCCTTGTCTCAGCATATATCTTATACATGAACGAGTTCACACTGGAGAGAAACCATATAAATGTAAACAATGTG

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000223547_MULTIEX1-1/2=C1-C2

Average complexity

C3

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.023 C2=0.113

Domain overlap (PFAM):

C1:

NO

A:

PF0135222=KRAB=WD(100=95.3)

C2:

PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=3.1)

Main Inclusion Isoform:

ENSP00000402097