HsaEX1011464 @ hg38
Exon Skipping
Gene
ENSG00000157680 | DGKI
Description
diacylglycerol kinase iota [Source:HGNC Symbol;Acc:HGNC:2855]
Coordinates
chr7:137587097-137597907:-
Coord C1 exon
chr7:137597847-137597907
Coord A exon
chr7:137594673-137594764
Coord C2 exon
chr7:137587097-137587210
Length
92 bp
Sequences
Splice sites
3' ss Seq
GATTTTTTTTGTTTTGTTAGTTT
3' ss Score
6.28
5' ss Seq
TAGGCAAGT
5' ss Score
1.91
Exon sequences
Seq C1 exon
GCTTGAATTGTATAGGAAAGTACCAAATCTGCGAATTCTGGCCTGTGGTGGGGATGGAACG
Seq A exon
TTTAGAAAATGAAACTTTTAATTGTGGGCGGAGGCAGAGTTTATATAGAGGAAACAGCCTGAGGAATTCATGAAGAAAACTGCTGGCTTTAG
Seq C2 exon
GTGGGCTGGATCCTTTCCATCCTGGATGAACTGCAGCTGAGCCCTCAGCCTCCTGTGGGGGTCCTTCCTCTGGGGACTGGGAATGACCTGGCTCGAACTCTCAACTGGGGAGGG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000157680-'46-34,'46-33,47-34
Average complexity
C1
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.026
Domain overlap (PFAM):
C1:
PF0078119=DAGK_cat=FE(16.0=100)
A:
PF0078119=DAGK_cat=PD(3.1=50.0)
C2:
PF0078119=DAGK_cat=FE(29.6=100)
Main Inclusion Isoform:
ENST00000288490fB13707
Other Inclusion Isoforms:
NA
Associated events
Conservation
Mouse
(mm9)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
TTGTATAGGAAAGTACCAAATCTGCG
R:
CCTCCCCAGTTGAGAGTTCGA
Band lengths:
167-259
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains