HsaEX1018711 @ hg38
Exon Skipping
Gene
ENSG00000164659 | KIAA1324L
Description
KIAA1324 like [Source:HGNC Symbol;Acc:HGNC:21945]
Coordinates
chr7:86908447-86912245:-
Coord C1 exon
chr7:86912072-86912245
Coord A exon
chr7:86909812-86910001
Coord C2 exon
chr7:86908447-86908543
Length
190 bp
Sequences
Splice sites
3' ss Seq
TTATGACTTTATTTTCCTAGGGG
3' ss Score
7.56
5' ss Seq
TAGGTAAGC
5' ss Score
8.89
Exon sequences
Seq C1 exon
GACCATTCGGTTTGCTATAGTGACTGCTTTTTCTACCATGAAAAAGAAAATCAGAGTTTGCACTATGACTTTAGCAACCTCAGCAGTGTGGGCTCATTAATGAATGGCCCCAGCTTCACCTCCAAAGGAACAAAATACTTCCATTTCTTCAATATCAGTTTATGTGGGCATGAG
Seq A exon
GGGAAGAAGATGGCTCTCTGTACCAACAATATAACAGACTTTACAGTAAAAGAAATAGTGGCAGGGTCAGATGATTACACAAATTTGGTAGGGGCATTTGTATGCCAGTCAACAATTATTCCTTCTGAAAGTAAGGGTTTCCGAGCAGCCTTATCATCACAATCCATCATTCTGGCAGATACATTCATAG
Seq C2 exon
GAGTCACAGTTGAAACCACATTGAAAAATATTAATATAAAAGAAGATATGTTCCCAGTTCCAACAAGCCAAATACCAGATGTGCATTTCTTTTATAA
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000164659-'35-42,'35-40,39-42
Average complexity
S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
PF076998=GCC2_GCC3=PD(15.7=13.8)
A:
NO
C2:
NO
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
ACCATTCGGTTTGCTATAGTGACT
R:
GGCTTGTTGGAACTGGGAACA
Band lengths:
242-432
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains