HsaEX1045649 @ hg38

Exon Skipping

Gene

ENSG00000197062 | ZSCAN26

Description

zinc finger and SCAN domain containing 26 [Source:HGNC Symbol;Acc:HGNC:12978]

Coordinates

chr6:28267010-28278224:+

Coord C1 exon

chr6:28267010-28267213

Coord A exon

chr6:28271854-28271934

Coord C2 exon

chr6:28276195-28278224

Length

81 bp

Sequences

Splice sites

3' ss Seq

TCTTGTTACTATAATTTTAGGAG

3' ss Score

6.45

5' ss Seq

TTGGTGAGT

5' ss Score

9.27

Exon sequences

Seq C1 exon

GAAATGACCCTCCCAGCCGTCCTCAGCAGGCAGCACCCATGTTAGTCTCCTTCTGCGATGCCTAAGCGGCAGCACCATCGAGCCAAGGTCCTCCAGCGTTCCTAGAGCGGAGAAGAAAGCGCTCCGAAGAGCTAGAGCTGACACTCGGCGATGAGCTAAGACGCTGTTTCAGAGCGTTTGGGTCCTCTGAGGCCCCTTGACCAG

Seq A exon

GAGTGTCTCTGAAGATACAGTCCAAAGAAAGTTCTCCAAAACAAGGAGAACAGTCTGAAGCTGGGGATGGCAACAGCATTG

Seq C2 exon

GTGAGGAGACAAGGATTGAGAATGGGAAGCTTATTGTAGTAACAGACTCTTGTGGAAGAGTAGAGTCATCTGGGAAAATATCTGAACCCATGGAGGCTCATAATGAGGGCTCTAACTTGGAAAGGCATCAGGCCAAGCCCAAAGAGAAGATTGAGTATAAATGCTCAGAACGTGAGCAGAGATTCATCCAGCACTTGGACCTGATTGAACATGCGAGTACACACACGGGAAAGAAACTCTGCGAGTCTGATGTGTGTCAGAGTTCCAGTCTTACAGGACATAAGAAAGTCCTCTCTAGAGAGAAAGGTCATCAGTGTCATGAGTGTGGGAAAGCCTTTCAGAGGAGTTCACACCTCGTCAGACATCAGAAAATCCATCTTGGTGAGAAGCCTTATCAGTGCAATGAGTGTGGCAAAGTCTTTAGCCAGAATGCAGGCCTTTTGGAACATCTCAGAATTCATACTGGAGAGAAACCTTATCTATGTATCCATTGTGGAAAA

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000197062_MULTIEX1-1/3=C1-C2

Average complexity

C1

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref, Alt. ATG (>10 exons))

No structure available

Features

Disorder rate (Iupred):

C1=NA A=0.133 C2=0.176

Domain overlap (PFAM):

C1:

NA

A:

NO

C2:

PF134651=zf-H2C2_2=WD(100=8.6),PF134651=zf-H2C2_2=WD(100=8.6),PF134651=zf-H2C2_2=WD(100=8.6),PF134651=zf-H2C2_2=WD(100=8.3),PF134651=zf-H2C2_2=WD(100=8.6)

Main Inclusion Isoform:

ENSP00000481707