HsaEX6008349 @ hg38

Exon Skipping

Gene

ENSG00000152926 | ZNF117

Description

zinc finger protein 117 [Source:HGNC Symbol;Acc:HGNC:12897]

Coordinates

chr7:64971776-64982116:-

Coord C1 exon

chr7:64981984-64982116

Coord A exon

chr7:64981387-64981482

Coord C2 exon

chr7:64971776-64979536

Length

96 bp

Sequences

Splice sites

3' ss Seq

ATTTATTTTCAATAAAACAGGTA

3' ss Score

5.72

5' ss Seq

TAGGTAAGT

5' ss Score

9.66

Exon sequences

Seq C1 exon

GGACCATTGACATTTATGGATGTGGCCATAGAATTCTCTTTGGAGGAGTGGCAATGCCTGGACACTGCACAGCAGAATTTATATAGGCATGTGATGTGAGAGAACTACAGAAACCTGGTTTTCTTGGGTGAAG

Seq A exon

GTATTGCTGTCTCTAAGCCAGACCTGATTACCTGTCTGGAGCAAGGAAAAGAGCCCTGGAATATGAAGAGACATGAGATGGTAGCTAAACATTTAG

Seq C2 exon

TTATGTTTTATTATTTTGCCCAACACCTTTGGCCAGAGCAGAACATAAGAGATTCTTTCCAGAAAGTGACCCTAAGAAGATATAGAAAATGTGGATATGAGAATTTACAGTTAAGAAAAGGCTGTAAAAGTGTGGTTGAGTGTAAACAGCACAAAGGAGATTATAGTGGACTTAACCAATGTTTGAAAACTACCTTGAGCAAAATATTTCAATGTAATAAATATGTAGAAGTTTTCCATAAAATTTCAAATTCAAATAGACACAAGATGAGACATACTGAAAATAAACATTTTAAATGTAAAGAATGTCGCAAAACATTTTGCATGCTTTCACACCTAACTCAACATAAAAGAATCCAAACTAGAGTGAATTTCTACAAATGTGAAGCATATGGAAGAGCCTTTAACTGGTCCTCAACCCTTAATAAACATAAGAGAATTCATACTGGAGAAAAACCTTACAAATGTAAAGAATGTGGCAAAGCCTTTAACCAGACCTCA

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000152926-'6-19,'6-14,7-19

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref, Alt. ATG (>10 exons))

No structure available

Features

Disorder rate (Iupred):

C1=NA A=0.000 C2=0.028

Domain overlap (PFAM):

C1:

NA

A:

NO

C2:

PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.3),PF134651=zf-H2C2_2=WD(100=4.7),PF134651=zf-H2C2_2=WD(100=5.3),PF134651=zf-H2C2_2=WD(100=5.3)

Main Inclusion Isoform:

ENSP00000282869