HsaEX6008785 @ hg38
Exon Skipping
Gene
ENSG00000164659 | KIAA1324L
Description
KIAA1324 like [Source:HGNC Symbol;Acc:HGNC:21945]
Coordinates
chr7:86891724-86897632:-
Coord C1 exon
chr7:86897506-86897632
Coord A exon
chr7:86892922-86893100
Coord C2 exon
chr7:86891724-86891889
Length
179 bp
Sequences
Splice sites
3' ss Seq
TTATGTTTTTTTTTTTAAAGGAA
3' ss Score
9.38
5' ss Seq
AAAGTAAGT
5' ss Score
9.72
Exon sequences
Seq C1 exon
CAAGTGCCCAGCAGGTACCTGTGATGGGTGTACGTTCTATTTCCTGTGGGAGAGTGCTGAAGCTTGCCCTCTGTGTACGGAGCATGACTTCCATGAGATTGAGGGAGCCTGCAAGAGAGGATTTCAG
Seq A exon
GAAACCTTGTATGTGTGGAATGAACCTAAATGGTGCATTAAAGGAATTTCTTTGCCTGAGAAAAAGTTGGCAACCTGTGAAACGGTTGACTTTTGGCTGAAGGTGGGAGCCGGTGTGGGAGCTTTTACTGCCGTTTTGCTGGTGGCTCTGACCTGCTACTTCTGGAAAAAGAATCAAAA
Seq C2 exon
ACTGGAATACAAATATTCCAAGTTAGTAATGACGACTAACTCAAAAGAGTGTGAACTCCCGGCTGCAGACAGTTGTGCTATCATGGAAGGAGAAGATAATGAAGAGGAAGTTGTATATTCCAATAAACAGTCACTACTAGGAAAACTCAAATCTTTGGCAACCAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000164659-'46-50,'46-48,48-50=AN
Average complexity
A_S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
NO
A:
NO
C2:
NO
Main Skipping Isoform:
ENST00000444627fB18222
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
TTCCTGTGGGAGAGTGCTGAA
R:
TGGTTGCCAAAGATTTGAGTTTTCC
Band lengths:
251-430
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains